BLASTX nr result
ID: Cephaelis21_contig00023724
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00023724
(1545 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EAZ40645.1| hypothetical protein OsJ_25114 [Oryza sativa Japo... 240 6e-61
ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group] g... 240 6e-61
gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse ... 228 3e-57
gb|AAP54617.2| retrotransposon protein, putative, unclassified [... 228 3e-57
gb|ABA96203.1| retrotransposon protein, putative, unclassified, ... 226 1e-56
>gb|EAZ40645.1| hypothetical protein OsJ_25114 [Oryza sativa Japonica Group]
Length = 560
Score = 240 bits (613), Expect = 6e-61
Identities = 124/318 (38%), Positives = 180/318 (56%), Gaps = 3/318 (0%)
Frame = +2
Query: 5 YAMSCLKIPVNIYADIE*CAAKFWWGSDPDQHRKIHWSSWKNMSRTKAQGGLDFPCLSEF 184
+AM C + +I I A++WW S+ ++ K+HW SW+ ++ K GGL F + F
Sbjct: 41 FAMGCFDLTKDICEQISKMIARYWW-SNQEKENKMHWLSWEKLTEPKWAGGLGFRDIHAF 99
Query: 185 NNALLAKQLWRIITQPTLLMSRLLKAKYFPTGGLFSATAPCNSSWLWRSWLKALPTIREG 364
N A+LAKQ WR+I P L +++LKAKY+P+G +FSA N S+ WRS + L T+R+G
Sbjct: 100 NLAMLAKQGWRLIQNPESLCAQVLKAKYYPSGNIFSAKKCANMSYTWRSICRGLLTLRDG 159
Query: 365 VRYRVGDGKTIKIWDSPWLPGSRKFKPSTSRPVNTPLNWVSELMLPDGKNWNSALVRSTF 544
+ +RVG+G I IW PW+P +P T R N + V EL+ P +W+ L+ TF
Sbjct: 160 MIWRVGNGAAINIWSDPWIPSDHTRRPITPRGRNL-VTRVEELIDPSTGSWDVELLTQTF 218
Query: 545 NEDDASQILLLPISKLQQPDKLLWHHASNGSFSVSSAYKRIR---L*REPCVEAESSNSR 715
+D + I +P+ ++ D L WH+ G FSV SAYK R L R A SN
Sbjct: 219 WPEDVNMIRTIPV-HIEMDDMLAWHYDEKGLFSVKSAYKVQRDGELQRRKRGSAGLSNGS 277
Query: 716 DQNRRMWKRLWGLNVPGKLRHFLWRALHKILPTAVQLQTRGMPCDGVCKTCSEGPETIAP 895
+ WK++W + +PGK++HF+WR H IL V LQ RGM D C C+ E
Sbjct: 278 TEREMYWKKVWKMQLPGKVKHFIWRFSHNILALRVNLQQRGMDLDSRCIICNRMNEDAGH 337
Query: 896 LFFLCKKSQQVWTHSPVQ 949
LFF CKK ++VW + ++
Sbjct: 338 LFFKCKKVKKVWQENNLE 355
>ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group]
gi|113611795|dbj|BAF22173.1| Os07g0613900 [Oryza sativa
Japonica Group]
Length = 1453
Score = 240 bits (613), Expect = 6e-61
Identities = 124/318 (38%), Positives = 180/318 (56%), Gaps = 3/318 (0%)
Frame = +2
Query: 5 YAMSCLKIPVNIYADIE*CAAKFWWGSDPDQHRKIHWSSWKNMSRTKAQGGLDFPCLSEF 184
+AM C + +I I A++WW S+ ++ K+HW SW+ ++ K GGL F + F
Sbjct: 934 FAMGCFDLTKDICEQISKMIARYWW-SNQEKENKMHWLSWEKLTEPKWAGGLGFRDIHAF 992
Query: 185 NNALLAKQLWRIITQPTLLMSRLLKAKYFPTGGLFSATAPCNSSWLWRSWLKALPTIREG 364
N A+LAKQ WR+I P L +++LKAKY+P+G +FSA N S+ WRS + L T+R+G
Sbjct: 993 NLAMLAKQGWRLIQNPESLCAQVLKAKYYPSGNIFSAKKCANMSYTWRSICRGLLTLRDG 1052
Query: 365 VRYRVGDGKTIKIWDSPWLPGSRKFKPSTSRPVNTPLNWVSELMLPDGKNWNSALVRSTF 544
+ +RVG+G I IW PW+P +P T R N + V EL+ P +W+ L+ TF
Sbjct: 1053 MIWRVGNGAAINIWSDPWIPSDHTRRPITPRGRNL-VTRVEELIDPSTGSWDVELLTQTF 1111
Query: 545 NEDDASQILLLPISKLQQPDKLLWHHASNGSFSVSSAYKRIR---L*REPCVEAESSNSR 715
+D + I +P+ ++ D L WH+ G FSV SAYK R L R A SN
Sbjct: 1112 WPEDVNMIRTIPV-HIEMDDMLAWHYDEKGLFSVKSAYKVQRDGELQRRKRGSAGLSNGS 1170
Query: 716 DQNRRMWKRLWGLNVPGKLRHFLWRALHKILPTAVQLQTRGMPCDGVCKTCSEGPETIAP 895
+ WK++W + +PGK++HF+WR H IL V LQ RGM D C C+ E
Sbjct: 1171 TEREMYWKKVWKMQLPGKVKHFIWRFSHNILALRVNLQQRGMDLDSRCIICNRMNEDAGH 1230
Query: 896 LFFLCKKSQQVWTHSPVQ 949
LFF CKK ++VW + ++
Sbjct: 1231 LFFKCKKVKKVWQENNLE 1248
>gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse transcriptase [Oryza sativa
Japonica Group]
Length = 1382
Score = 228 bits (582), Expect = 3e-57
Identities = 136/376 (36%), Positives = 192/376 (51%), Gaps = 9/376 (2%)
Frame = +2
Query: 5 YAMSCLKIPVNIYADIE*CAAKFWWGSDPDQHRKIHWSSWKNMSRTKAQGGLDFPCLSEF 184
Y MSC +IPV+I ++ C A WWG + D +K+HW SW +S K GG+ F + F
Sbjct: 818 YVMSCFRIPVSICEKMKTCIADHWWGFE-DGKKKMHWKSWSWLSTPKFLGGMGFREFTTF 876
Query: 185 NNALLAKQLWRIITQPTLLMSRLLKAKYFPTGGLFSATAPCNSSWLWRSWLKALPTIREG 364
N A+L +Q WR++T P L SR+LK +YFP + A P + S+ WRS L + +G
Sbjct: 877 NQAMLGRQCWRLLTDPDSLCSRVLKGRYFPNSSFWEAAQPKSPSFTWRSLLFGRELLAKG 936
Query: 365 VRYRVGDGKTIKIWDSPWLPGSRKFKPSTSRPVNTPLNWVSELMLPDGKNWNSALVRSTF 544
VR+ VGDGKTIKI+ W+PG R +T P T VS LM D + W+ L+RS F
Sbjct: 937 VRWGVGDGKTIKIFSDNWIPGFRPQLVTTLSPFPTDAT-VSCLMNEDARCWDGDLIRSLF 995
Query: 545 NEDDASQILLLPISKLQQPDKLLWHHASNGSFSVSSAYKRIRL*REPCVEAESSNSRD-- 718
D A +IL +PIS+ D W H G +SV SAY L R A+ SNS
Sbjct: 996 PVDIAKEILQIPISRHGDADFASWPHDKLGLYSVRSAY---NLARSEAFFADQSNSGRGM 1052
Query: 719 -----QNRRMWKRLWGLNVPGKLRHFLWRALHKILPTAVQLQTRGMPCDGVCKTCSEGPE 883
++++ WK LW +N PGK++ LWRA H+ L T QL+ R +P C C+ +
Sbjct: 1053 ASRLLESQKDWKGLWKINAPGKMKITLWRAAHECLATGFQLRRRHIPSTDGCVFCNR-DD 1111
Query: 884 TIAPLFFLCKKSQQVWTHSPVQWDYPLTPS--TDISSWWLHVSGLDNNELNQSRLELSVF 1057
T+ +F C + Q+W + L + + + W ++ N L
Sbjct: 1112 TVEHVFLFCPFAAQIWEEIKGKCAVKLGRNGFSTMRQWIFDFLKRGSSHAN----TLLAV 1167
Query: 1058 VMWGIWKMRNEWLFNN 1105
W IW+ RN NN
Sbjct: 1168 TFWHIWEARNNTKNNN 1183
>gb|AAP54617.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group] gi|125575397|gb|EAZ16681.1| hypothetical
protein OsJ_32156 [Oryza sativa Japonica Group]
Length = 1339
Score = 228 bits (582), Expect = 3e-57
Identities = 136/376 (36%), Positives = 192/376 (51%), Gaps = 9/376 (2%)
Frame = +2
Query: 5 YAMSCLKIPVNIYADIE*CAAKFWWGSDPDQHRKIHWSSWKNMSRTKAQGGLDFPCLSEF 184
Y MSC +IPV+I ++ C A WWG + D +K+HW SW +S K GG+ F + F
Sbjct: 775 YVMSCFRIPVSICEKMKTCIADHWWGFE-DGKKKMHWKSWSWLSTPKFLGGMGFREFTTF 833
Query: 185 NNALLAKQLWRIITQPTLLMSRLLKAKYFPTGGLFSATAPCNSSWLWRSWLKALPTIREG 364
N A+L +Q WR++T P L SR+LK +YFP + A P + S+ WRS L + +G
Sbjct: 834 NQAMLGRQCWRLLTDPDSLCSRVLKGRYFPNSSFWEAAQPKSPSFTWRSLLFGRELLAKG 893
Query: 365 VRYRVGDGKTIKIWDSPWLPGSRKFKPSTSRPVNTPLNWVSELMLPDGKNWNSALVRSTF 544
VR+ VGDGKTIKI+ W+PG R +T P T VS LM D + W+ L+RS F
Sbjct: 894 VRWGVGDGKTIKIFSDNWIPGFRPQLVTTLSPFPTDAT-VSCLMNEDARCWDGDLIRSLF 952
Query: 545 NEDDASQILLLPISKLQQPDKLLWHHASNGSFSVSSAYKRIRL*REPCVEAESSNSRD-- 718
D A +IL +PIS+ D W H G +SV SAY L R A+ SNS
Sbjct: 953 PVDIAKEILQIPISRHGDADFASWPHDKLGLYSVRSAY---NLARSEAFFADQSNSGRGM 1009
Query: 719 -----QNRRMWKRLWGLNVPGKLRHFLWRALHKILPTAVQLQTRGMPCDGVCKTCSEGPE 883
++++ WK LW +N PGK++ LWRA H+ L T QL+ R +P C C+ +
Sbjct: 1010 ASRLLESQKDWKGLWKINAPGKMKITLWRAAHECLATGFQLRRRHIPSTDGCVFCNR-DD 1068
Query: 884 TIAPLFFLCKKSQQVWTHSPVQWDYPLTPS--TDISSWWLHVSGLDNNELNQSRLELSVF 1057
T+ +F C + Q+W + L + + + W ++ N L
Sbjct: 1069 TVEHVFLFCPFAAQIWEEIKGKCAVKLGRNGFSTMRQWIFDFLKRGSSHAN----TLLAV 1124
Query: 1058 VMWGIWKMRNEWLFNN 1105
W IW+ RN NN
Sbjct: 1125 TFWHIWEARNNTKNNN 1140
>gb|ABA96203.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
Length = 1378
Score = 226 bits (577), Expect = 1e-56
Identities = 121/316 (38%), Positives = 173/316 (54%)
Frame = +2
Query: 2 IYAMSCLKIPVNIYADIE*CAAKFWWGSDPDQHRKIHWSSWKNMSRTKAQGGLDFPCLSE 181
+YAM KIP I I +++WWG D D HR+IHW W M K +GG+ F L
Sbjct: 266 VYAMMVFKIPNKICKGITDAISQYWWGDDAD-HRRIHWQEWWKMCMPKGKGGMGFRDLQS 324
Query: 182 FNNALLAKQLWRIITQPTLLMSRLLKAKYFPTGGLFSATAPCNSSWLWRSWLKALPTIRE 361
FN ALLAKQ+WR+++ P L +R+L+A+Y+ G L +A SS+ W+S L L ++
Sbjct: 325 FNLALLAKQVWRLLSDPDSLCARVLRARYYRDGKLLNARMKSGSSYTWQSILAGLQCFKQ 384
Query: 362 GVRYRVGDGKTIKIWDSPWLPGSRKFKPSTSRPVNTPLNWVSELMLPDGKNWNSALVRST 541
G +RVGDG IKIW+ W+PGS K T+R N + V EL+ P W L+++
Sbjct: 385 GYIWRVGDGTQIKIWEDNWIPGSHNMKIQTNRG-NNLVATVDELIDPINFTWGGDLLKTI 443
Query: 542 FNEDDASQILLLPISKLQQPDKLLWHHASNGSFSVSSAYKRIRL*REPCVEAESSNSRDQ 721
F D +I+ +PI + + D + W + +G+FSV SAY + A+ S
Sbjct: 444 FWPIDVCRIMQIPI-RAGRDDLVAWQYNRSGTFSVKSAYHCQWDYKFGERSAQMQASTAS 502
Query: 722 NRRMWKRLWGLNVPGKLRHFLWRALHKILPTAVQLQTRGMPCDGVCKTCSEGPETIAPLF 901
R+WKRLW L VP K++ F WRAL ++P L R + G C C GPE I +
Sbjct: 503 RSRLWKRLWNLKVPAKIKIFGWRALKGLVPCRAILANRHVGDSGGCPVCQNGPEDIKHMI 562
Query: 902 FLCKKSQQVWTHSPVQ 949
F C +++QVW V+
Sbjct: 563 FTCARAKQVWNSLGVE 578