BLASTX nr result

ID: Cephaelis21_contig00023701 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00023701
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285726.1| PREDICTED: elongation factor P [Vitis vinife...   124   1e-26
ref|XP_003559276.1| PREDICTED: elongation factor P-like [Brachyp...   116   2e-24
gb|ACG41065.1| elongation factor P [Zea mays]                         114   8e-24
ref|NP_001149082.1| elongation factor P [Zea mays] gi|195624552|...   114   8e-24
gb|AAP21425.1| putative translation elongation factor P [Oryza s...   113   2e-23

>ref|XP_002285726.1| PREDICTED: elongation factor P [Vitis vinifera]
           gi|297746480|emb|CBI16536.3| unnamed protein product
           [Vitis vinifera]
          Length = 258

 Score =  124 bits (310), Expect = 1e-26
 Identities = 64/100 (64%), Positives = 76/100 (76%), Gaps = 3/100 (3%)
 Frame = -1

Query: 293 TRSLLTAVHAH---AQPPLLSSLWSISQLRHARFTGADVRPGNVIERKGKIYQVIKAQHT 123
           T S LT+   H   ++  L SS WS +QLR A+F G+DVRPGN I RKG+IYQV+KAQHT
Sbjct: 42  TLSSLTSSSNHTPLSRTLLASSPWSATQLRGAKFLGSDVRPGNCIRRKGRIYQVLKAQHT 101

Query: 122 TQGRGGAIIQVELRDVDGGNKVNERLRTDEAIERVYVEEK 3
             GRGGA IQVELRD+D G+KVNE+ RTDE IE V+VEEK
Sbjct: 102 QHGRGGATIQVELRDIDSGSKVNEKFRTDETIESVFVEEK 141


>ref|XP_003559276.1| PREDICTED: elongation factor P-like [Brachypodium distachyon]
          Length = 248

 Score =  116 bits (291), Expect = 2e-24
 Identities = 65/113 (57%), Positives = 79/113 (69%), Gaps = 6/113 (5%)
 Frame = -1

Query: 323 LVSPPPSS-----ASTRSLLTAVHAHAQPPLLSSL-WSISQLRHARFTGADVRPGNVIER 162
           L SPPP+      A   S  +A    A    +S+  W+ +Q R A+  G+DV+ GNVI+R
Sbjct: 20  LRSPPPARHLHRHAHAVSTFSAARGAAPAGSISATPWAATQRRGAKMLGSDVKLGNVIQR 79

Query: 161 KGKIYQVIKAQHTTQGRGGAIIQVELRDVDGGNKVNERLRTDEAIERVYVEEK 3
           KG IYQVIKAQH+ QGRGGA IQVELRDVD GNK+ ER RTDEA+ERV+VEEK
Sbjct: 80  KGHIYQVIKAQHSHQGRGGATIQVELRDVDTGNKIVERFRTDEALERVFVEEK 132


>gb|ACG41065.1| elongation factor P [Zea mays]
          Length = 246

 Score =  114 bits (285), Expect = 8e-24
 Identities = 55/82 (67%), Positives = 68/82 (82%)
 Frame = -1

Query: 248 LLSSLWSISQLRHARFTGADVRPGNVIERKGKIYQVIKAQHTTQGRGGAIIQVELRDVDG 69
           L ++ W+ +Q R A+  G+DV+ GNVI+R+G IYQVIKAQH+ QGRGGA IQVELRDVD 
Sbjct: 48  LATAPWAATQRRGAKMLGSDVKLGNVIQRRGHIYQVIKAQHSHQGRGGATIQVELRDVDT 107

Query: 68  GNKVNERLRTDEAIERVYVEEK 3
           GNK+ ER RTDEA+ERV+VEEK
Sbjct: 108 GNKITERFRTDEALERVFVEEK 129


>ref|NP_001149082.1| elongation factor P [Zea mays] gi|195624552|gb|ACG34106.1|
           elongation factor P [Zea mays]
          Length = 246

 Score =  114 bits (285), Expect = 8e-24
 Identities = 55/82 (67%), Positives = 68/82 (82%)
 Frame = -1

Query: 248 LLSSLWSISQLRHARFTGADVRPGNVIERKGKIYQVIKAQHTTQGRGGAIIQVELRDVDG 69
           L ++ W+ +Q R A+  G+DV+ GNVI+R+G IYQVIKAQH+ QGRGGA IQVELRDVD 
Sbjct: 48  LATAPWAATQRRGAKMLGSDVKLGNVIQRRGHIYQVIKAQHSHQGRGGATIQVELRDVDT 107

Query: 68  GNKVNERLRTDEAIERVYVEEK 3
           GNK+ ER RTDEA+ERV+VEEK
Sbjct: 108 GNKITERFRTDEALERVFVEEK 129


>gb|AAP21425.1| putative translation elongation factor P [Oryza sativa Japonica
           Group]
          Length = 247

 Score =  113 bits (282), Expect = 2e-23
 Identities = 59/101 (58%), Positives = 72/101 (71%), Gaps = 12/101 (11%)
 Frame = -1

Query: 269 HAHAQPPLLSSL------------WSISQLRHARFTGADVRPGNVIERKGKIYQVIKAQH 126
           HAHA   L + L            W+  Q R A+  G++V+ GNVI+R+G+IYQVIKAQH
Sbjct: 30  HAHAVATLAAVLRDQTAGSLAAAPWAAIQRRGAKMLGSEVKLGNVIQRRGRIYQVIKAQH 89

Query: 125 TTQGRGGAIIQVELRDVDGGNKVNERLRTDEAIERVYVEEK 3
           + QGRGGA IQVELRDVD GNK+ ER RTDEA+ERV+VEEK
Sbjct: 90  SHQGRGGATIQVELRDVDTGNKITERFRTDEALERVFVEEK 130


Top