BLASTX nr result

ID: Cephaelis21_contig00023601 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00023601
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269291.1| PREDICTED: F-box protein FBW2 isoform 1 [Vit...   159   2e-37
ref|XP_002301066.1| predicted protein [Populus trichocarpa] gi|2...   125   4e-27
ref|XP_002454240.1| hypothetical protein SORBIDRAFT_04g027350 [S...   125   5e-27
dbj|BAJ92240.1| predicted protein [Hordeum vulgare subsp. vulgare]    124   8e-27
ref|NP_001057164.1| Os06g0219700 [Oryza sativa Japonica Group] g...   123   1e-26

>ref|XP_002269291.1| PREDICTED: F-box protein FBW2 isoform 1 [Vitis vinifera]
           gi|359496684|ref|XP_003635300.1| PREDICTED: F-box
           protein FBW2 isoform 2 [Vitis vinifera]
           gi|296085646|emb|CBI29445.3| unnamed protein product
           [Vitis vinifera]
          Length = 317

 Score =  159 bits (402), Expect = 2e-37
 Identities = 77/99 (77%), Positives = 89/99 (89%)
 Frame = -3

Query: 308 FAFVANHAKSLQTLRLQRGEISNSIVKQFAWKLSAVTFLDLSYCSKIGAQALEALGKHCK 129
           F+FVA+HAKSLQTLRL R EIS+ IV++ AWKLS +TFLD+SYC K+GA ALEA+GKHCK
Sbjct: 97  FSFVADHAKSLQTLRLPRSEISDPIVEEVAWKLSTITFLDVSYCRKMGAPALEAIGKHCK 156

Query: 128 FLTGLRRIMHPLEVIDKPSQDDEALAIAFTMPGLKHLEM 12
           FLTGLRRIMHPLE+IDK +QDDEALAIA TMP LKHLE+
Sbjct: 157 FLTGLRRIMHPLEIIDKLTQDDEALAIAATMPKLKHLEI 195


>ref|XP_002301066.1| predicted protein [Populus trichocarpa] gi|222842792|gb|EEE80339.1|
           predicted protein [Populus trichocarpa]
          Length = 321

 Score =  125 bits (314), Expect = 4e-27
 Identities = 63/99 (63%), Positives = 77/99 (77%)
 Frame = -3

Query: 308 FAFVANHAKSLQTLRLQRGEISNSIVKQFAWKLSAVTFLDLSYCSKIGAQALEALGKHCK 129
           F+F+A+HA SLQTLR+ R +I +SIV+Q A +LS VTFLD+SYC+KI  +ALEA+GKHCK
Sbjct: 97  FSFLADHAGSLQTLRIPRSDIGDSIVEQIAGRLSTVTFLDVSYCNKISGRALEAIGKHCK 156

Query: 128 FLTGLRRIMHPLEVIDKPSQDDEALAIAFTMPGLKHLEM 12
            L GL R MHPL+     +QDDEA AIA TMP LK LEM
Sbjct: 157 LLVGLCRNMHPLDTEGLEAQDDEAYAIATTMPKLKRLEM 195


>ref|XP_002454240.1| hypothetical protein SORBIDRAFT_04g027350 [Sorghum bicolor]
           gi|241934071|gb|EES07216.1| hypothetical protein
           SORBIDRAFT_04g027350 [Sorghum bicolor]
          Length = 365

 Score =  125 bits (313), Expect = 5e-27
 Identities = 60/99 (60%), Positives = 81/99 (81%)
 Frame = -3

Query: 308 FAFVANHAKSLQTLRLQRGEISNSIVKQFAWKLSAVTFLDLSYCSKIGAQALEALGKHCK 129
           F+F+ ++A++L+TL + R EIS+SIV+  A +LS VTFLD+S C+KIGA+ALEA GKHCK
Sbjct: 144 FSFIGDNARALRTLEIPRSEISDSIVETVAPRLSNVTFLDISSCTKIGARALEAFGKHCK 203

Query: 128 FLTGLRRIMHPLEVIDKPSQDDEALAIAFTMPGLKHLEM 12
            L GLRR+MHP++++DK  Q DEA AIA +MP L+HLEM
Sbjct: 204 SLVGLRRVMHPIDLVDKVCQHDEAHAIACSMPKLRHLEM 242


>dbj|BAJ92240.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 324

 Score =  124 bits (311), Expect = 8e-27
 Identities = 62/99 (62%), Positives = 78/99 (78%)
 Frame = -3

Query: 308 FAFVANHAKSLQTLRLQRGEISNSIVKQFAWKLSAVTFLDLSYCSKIGAQALEALGKHCK 129
           F F+ANHA+SL+TL L R EIS+ IV+  A +LS VTFLD+S C+KIGA+ALEA GK+CK
Sbjct: 98  FTFIANHARSLKTLELPRSEISDCIVEDVAQRLSNVTFLDVSSCTKIGARALEAFGKNCK 157

Query: 128 FLTGLRRIMHPLEVIDKPSQDDEALAIAFTMPGLKHLEM 12
            L GLRR+MHP++V  K  Q DEA AIA +MP L+HLE+
Sbjct: 158 SLVGLRRVMHPIDVAGKVCQHDEARAIAGSMPKLRHLEI 196


>ref|NP_001057164.1| Os06g0219700 [Oryza sativa Japonica Group]
           gi|51535368|dbj|BAD37239.1| F-box protein-like [Oryza
           sativa Japonica Group] gi|113595204|dbj|BAF19078.1|
           Os06g0219700 [Oryza sativa Japonica Group]
           gi|125554574|gb|EAZ00180.1| hypothetical protein
           OsI_22185 [Oryza sativa Indica Group]
           gi|125596515|gb|EAZ36295.1| hypothetical protein
           OsJ_20616 [Oryza sativa Japonica Group]
           gi|215697729|dbj|BAG91723.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 317

 Score =  123 bits (309), Expect = 1e-26
 Identities = 59/99 (59%), Positives = 78/99 (78%)
 Frame = -3

Query: 308 FAFVANHAKSLQTLRLQRGEISNSIVKQFAWKLSAVTFLDLSYCSKIGAQALEALGKHCK 129
           F F+ +HA+SL+T+ L R +IS+S+V+  A +LS VTFLD+S C+KIGA+ALEA GKHCK
Sbjct: 98  FTFIGDHARSLKTMELPRSDISDSLVENVAPRLSNVTFLDISSCTKIGARALEAFGKHCK 157

Query: 128 FLTGLRRIMHPLEVIDKPSQDDEALAIAFTMPGLKHLEM 12
            L GLRR+MHP +V+ + SQ DEA AIA  MP L+HLE+
Sbjct: 158 SLIGLRRVMHPTDVVGRASQHDEARAIACNMPKLRHLEI 196


Top