BLASTX nr result
ID: Cephaelis21_contig00023552
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00023552
(1297 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-... 127 1e-44
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta... 122 3e-42
gb|ABA98491.1| retrotransposon protein, putative, unclassified [... 117 5e-42
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo... 117 1e-41
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ... 115 1e-41
>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
Length = 1142
Score = 127 bits (318), Expect(5) = 1e-44
Identities = 66/147 (44%), Positives = 90/147 (61%)
Frame = +1
Query: 1 LYLPLIISQSKKEVFGSIQDAVNKWILSWTNHFPSHACKEVLIKSVINAMPLYAMPCLML 180
L LP + SK +VF ++D + I W+ F S KEV+IKSV +P Y M C L
Sbjct: 535 LGLPESLGGSKTKVFSFVRDRLQSRINGWSAKFLSKGGKEVMIKSVAATLPRYVMSCFRL 594
Query: 181 PKNICQGIEKSAAKFWWNSNGTQAREIY*KA*EKISWKKFEGGLGFRRIQDFNTALLTKQ 360
PK I + + AKFWW+SNG +R ++ A +K+ K +GGLGFR + DFN+ALL KQ
Sbjct: 595 PKAITSKLTSAVAKFWWSSNG-DSRGMHWMAWDKLCSSKSDGGLGFRNVDDFNSALLAKQ 653
Query: 361 LWRLITQPNLLMSKVMRSKYFPRGGLL 441
LWRLIT P+ L +KV + +YF + L
Sbjct: 654 LWRLITAPDSLFAKVFKGRYFRKSNPL 680
Score = 54.3 bits (129), Expect(5) = 1e-44
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
Frame = +2
Query: 599 VSELINPNSKEWNIKLISNIFSKQDTEAILQIPISKTGSKDYLVWQYTNKGNFTVTSAYN 778
V LI+ S WNI L+ +F +D I +PI +D L W +T GN+TV S Y+
Sbjct: 745 VKSLIDSRSNFWNIDLLKELFDPEDVPLISALPIGNPNMEDTLGWHFTKAGNYTVKSGYH 804
Query: 779 WLISQHHLSNSNPKSSNRKANLRA-MWKRL*NLNIKRKIKHFLLEGLS 919
++ L+ L+A +WK + K++HFL + LS
Sbjct: 805 --TARLDLNEGTTLIGPDLTTLKAYIWK----VQCPPKLRHFLWQILS 846
Score = 33.9 bits (76), Expect(5) = 1e-44
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 973 CTVCGEQLETLEHLFFQCQNSQRIWKLS 1056
C CG E++ H FQC +++IW LS
Sbjct: 866 CVSCGASEESINHTLFQCHPARQIWALS 893
Score = 26.9 bits (58), Expect(5) = 1e-44
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 1170 YILWGIWKARNA*CFKETNIYVIAVLDRCRLEWQEFMEA 1286
+I+W IWKARN F+ + + +L E Q + EA
Sbjct: 929 WIIWYIWKARNEKVFENVDKDPMEILLLAVKEAQSWQEA 967
Score = 26.2 bits (56), Expect(5) = 1e-44
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3
Query: 474 WRSWIRVKKVLKAGLRFQVRDGQSIQMWD 560
WRS I + ++ GL +V G SI +W+
Sbjct: 692 WRSMISARSLVYKGLIKRVGSGASISVWN 720
>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1374
Score = 122 bits (307), Expect(5) = 3e-42
Identities = 66/156 (42%), Positives = 92/156 (58%)
Frame = +1
Query: 1 LYLPLIISQSKKEVFGSIQDAVNKWILSWTNHFPSHACKEVLIKSVINAMPLYAMPCLML 180
L LP SK ++D + K +L W ++F S KE+L+K+V A+P Y M C +
Sbjct: 751 LGLPESFQGSKVATLSYLKDRLGKKVLGWQSNFLSPGGKEILLKAVAMALPTYTMSCFKI 810
Query: 181 PKNICQGIEKSAAKFWWNSNGTQAREIY*KA*EKISWKKFEGGLGFRRIQDFNTALLTKQ 360
PK ICQ IE A+FWW N + R ++ KA +S K GGLGF+ I+ FN ALL KQ
Sbjct: 811 PKTICQQIESVMAEFWW-KNKKEGRGLHWKAWCHLSRPKAVGGLGFKEIEAFNIALLGKQ 869
Query: 361 LWRLITQPNLLMSKVMRSKYFPRGGLLYAEANQQSS 468
LWR+IT+ + LM+KV +S+YF + L A + S
Sbjct: 870 LWRMITEKDSLMAKVFKSRYFSKSDPLNAPLGSRPS 905
Score = 55.5 bits (132), Expect(5) = 3e-42
Identities = 28/106 (26%), Positives = 60/106 (56%)
Frame = +2
Query: 587 TVQWVSELINPNSKEWNIKLISNIFSKQDTEAILQIPISKTGSKDYLVWQYTNKGNFTVT 766
++ V +L+ P+ ++WN L+S +F E IL + ++D W+Y+ G+++V
Sbjct: 964 SIHVVKDLLLPDGRDWNWNLVSLLFPDNTQENILALRPGGKETRDRFTWEYSRSGHYSVK 1023
Query: 767 SAYNWLISQHHLSNSNPKSSNRKANLRAMWKRL*NLNIKRKIKHFL 904
S Y W++++ +NP+ + +L +++++ L++ KI HFL
Sbjct: 1024 SGY-WVMTEIINQRNNPQEV-LQPSLDPIFQQIWKLDVPPKIHHFL 1067
Score = 30.4 bits (67), Expect(5) = 3e-42
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 970 ACTVCGEQLETLEHLFFQCQNSQRIWKLSP 1059
+C C ET+ HL F+C ++ W +SP
Sbjct: 1091 SCVRCPSHGETVNHLLFKCPFARLTWAISP 1120
Score = 26.2 bits (56), Expect(5) = 3e-42
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 6/32 (18%)
Frame = +3
Query: 1140 VHQNQIE------LTSYILWGIWKARNA*CFK 1217
VH++Q E L +ILW +WK RN FK
Sbjct: 1143 VHKSQPEESDHHALIPWILWRLWKNRNDLVFK 1174
Score = 25.8 bits (55), Expect(5) = 3e-42
Identities = 8/28 (28%), Positives = 18/28 (64%)
Frame = +3
Query: 474 WRSWIRVKKVLKAGLRFQVRDGQSIQMW 557
W+S + ++K G+R + +G++I +W
Sbjct: 908 WKSIYEAQVLIKQGIRAVIGNGETINVW 935
>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1621
Score = 117 bits (292), Expect(4) = 5e-42
Identities = 60/144 (41%), Positives = 90/144 (62%)
Frame = +1
Query: 1 LYLPLIISQSKKEVFGSIQDAVNKWILSWTNHFPSHACKEVLIKSVINAMPLYAMPCLML 180
L LP+ + +S+ ++F +++ + + I W S A KE+LIK+V A+P +AM C L
Sbjct: 1007 LGLPVFVGRSRTKIFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQAIPTFAMGCFEL 1066
Query: 181 PKNICQGIEKSAAKFWWNSNGTQAREIY*KA*EKISWKKFEGGLGFRRIQDFNTALLTKQ 360
K++C I K AK+WW SN + +++ + K++ K GGLGFR I FN A+L KQ
Sbjct: 1067 TKDLCDQISKMIAKYWW-SNQEKDNKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQ 1125
Query: 361 LWRLITQPNLLMSKVMRSKYFPRG 432
WRLI P+ L S+V+R+KYFP G
Sbjct: 1126 GWRLIQDPDSLCSRVLRAKYFPLG 1149
Score = 62.8 bits (151), Expect(4) = 5e-42
Identities = 40/113 (35%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
Frame = +2
Query: 599 VSELINPNSKEWNIKLISNIFSKQDTEAILQIPISKTGSKDYLVWQYTNKGNFTVTSAYN 778
V ELI+P + W+ L+S F ++D AI IP+ +D L W + +G FTV SAY
Sbjct: 1216 VEELIDPYTGTWDEDLLSQTFWEEDVAAIKSIPV-HVEMEDVLAWHFDARGCFTVKSAYK 1274
Query: 779 WLISQHHLSNSN--PKSSNRKANLRAMWKRL*NLNIKRKIKHFLLEGLSQNLA 931
++ N P SN ++ WK+L L + KIKHFL LA
Sbjct: 1275 VQREMERRASRNGCPGVSNWESGDDDFWKKLWKLGVPGKIKHFLWRMCHNTLA 1327
Score = 32.0 bits (71), Expect(4) = 5e-42
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +1
Query: 973 CTVCGEQLETLEHLFFQCQNSQRIWK 1050
C +CG E HLFF+C+ +++W+
Sbjct: 1343 CVMCGRYNEDAGHLFFKCKPVKKVWQ 1368
Score = 28.1 bits (61), Expect(4) = 5e-42
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 456 STVILLWRSWIRVKKVLKAGLRFQVRDGQSIQMW 557
S V WRS + +VL+ G+ ++V DG I +W
Sbjct: 1158 SNVSYTWRSIQKGLRVLQNGMIWRVGDGSKINIW 1191
>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
Length = 1594
Score = 117 bits (292), Expect(4) = 1e-41
Identities = 60/144 (41%), Positives = 90/144 (62%)
Frame = +1
Query: 1 LYLPLIISQSKKEVFGSIQDAVNKWILSWTNHFPSHACKEVLIKSVINAMPLYAMPCLML 180
L LP+ + +S+ ++F +++ + + I W S A KE+LIK+V A+P +AM C L
Sbjct: 980 LGLPVFVGRSRTKIFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQAIPTFAMGCFEL 1039
Query: 181 PKNICQGIEKSAAKFWWNSNGTQAREIY*KA*EKISWKKFEGGLGFRRIQDFNTALLTKQ 360
K++C I K AK+WW SN + +++ + K++ K GGLGFR I FN A+L KQ
Sbjct: 1040 TKDLCDQISKMIAKYWW-SNQEKDNKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQ 1098
Query: 361 LWRLITQPNLLMSKVMRSKYFPRG 432
WRLI P+ L S+V+R+KYFP G
Sbjct: 1099 GWRLIQDPDSLCSRVLRAKYFPLG 1122
Score = 62.8 bits (151), Expect(4) = 1e-41
Identities = 40/113 (35%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
Frame = +2
Query: 599 VSELINPNSKEWNIKLISNIFSKQDTEAILQIPISKTGSKDYLVWQYTNKGNFTVTSAYN 778
V ELI+P + W+ L+S F ++D AI IP+ +D L W + +G FTV SAY
Sbjct: 1189 VEELIDPYTGTWDEDLLSQTFWEEDVAAIKSIPV-HVEMEDVLAWHFDARGCFTVKSAYK 1247
Query: 779 WLISQHHLSNSN--PKSSNRKANLRAMWKRL*NLNIKRKIKHFLLEGLSQNLA 931
++ N P SN ++ WK+L L + KIKHFL LA
Sbjct: 1248 VQREMERRASRNGCPGVSNWESGDDDFWKKLWKLGVPGKIKHFLWRMCHNTLA 1300
Score = 32.0 bits (71), Expect(4) = 1e-41
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +1
Query: 973 CTVCGEQLETLEHLFFQCQNSQRIWK 1050
C +CG E HLFF+C+ +++W+
Sbjct: 1316 CVMCGRYNEDAGHLFFKCKPVKKVWQ 1341
Score = 26.9 bits (58), Expect(4) = 1e-41
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 456 STVILLWRSWIRVKKVLKAGLRFQVRDGQSIQMW 557
S V WRS + +VL+ G+ +++ DG I +W
Sbjct: 1131 SNVSYTWRSIQKGLRVLQNGMIWRMGDGSKINIW 1164
>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1509
Score = 115 bits (288), Expect(4) = 1e-41
Identities = 59/144 (40%), Positives = 89/144 (61%)
Frame = +1
Query: 1 LYLPLIISQSKKEVFGSIQDAVNKWILSWTNHFPSHACKEVLIKSVINAMPLYAMPCLML 180
L LP+ + +S+ ++F +++ + + I W S A KE+LIK+V +P +AM C L
Sbjct: 952 LGLPVFVGRSRTKIFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQVIPTFAMGCFEL 1011
Query: 181 PKNICQGIEKSAAKFWWNSNGTQAREIY*KA*EKISWKKFEGGLGFRRIQDFNTALLTKQ 360
K++C I K AK+WW SN + +++ + K++ K GGLGFR I FN A+L KQ
Sbjct: 1012 TKDLCDQISKMIAKYWW-SNQEKDNKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQ 1070
Query: 361 LWRLITQPNLLMSKVMRSKYFPRG 432
WRLI P+ L S+V+R+KYFP G
Sbjct: 1071 GWRLIQDPDSLCSRVLRAKYFPLG 1094
Score = 62.8 bits (151), Expect(4) = 1e-41
Identities = 40/113 (35%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
Frame = +2
Query: 599 VSELINPNSKEWNIKLISNIFSKQDTEAILQIPISKTGSKDYLVWQYTNKGNFTVTSAYN 778
V ELI+P + W+ L+S F ++D AI IP+ +D L W + +G FTV SAY
Sbjct: 1161 VEELIDPYTGTWDEDLLSQTFWEEDVAAIKSIPV-HVEMEDVLAWHFDARGCFTVKSAYK 1219
Query: 779 WLISQHHLSNSN--PKSSNRKANLRAMWKRL*NLNIKRKIKHFLLEGLSQNLA 931
++ N P SN ++ WK+L L + KIKHFL LA
Sbjct: 1220 VQREMERRASRNGCPGVSNWESGDDDFWKKLWKLGVPGKIKHFLWRMCHNTLA 1272
Score = 32.0 bits (71), Expect(4) = 1e-41
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +1
Query: 973 CTVCGEQLETLEHLFFQCQNSQRIWK 1050
C +CG E HLFF+C+ +++W+
Sbjct: 1288 CVMCGRYNEDAGHLFFKCKPVKKVWQ 1313
Score = 28.1 bits (61), Expect(4) = 1e-41
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 456 STVILLWRSWIRVKKVLKAGLRFQVRDGQSIQMW 557
S V WRS + +VL+ G+ ++V DG I +W
Sbjct: 1103 SNVSYTWRSIQKGLRVLQNGMIWRVGDGSKINIW 1136