BLASTX nr result

ID: Cephaelis21_contig00023453 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00023453
         (2215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM82603.1|AF525305_1 putative DNA/RNA binding protein [Brass...    72   5e-10
gb|AAC28216.1| T24M8.9 gene product [Arabidopsis thaliana] gi|72...    65   1e-07
emb|CAB81573.1| putative protein [Arabidopsis thaliana]                62   8e-07
emb|CCA65980.1| hypothetical protein [Beta vulgaris subsp. vulga...    61   1e-06
emb|CAB10338.1| hypothetical protein [Arabidopsis thaliana] gi|7...    60   2e-06

>gb|AAM82603.1|AF525305_1 putative DNA/RNA binding protein [Brassica napus]
          Length = 306

 Score = 72.4 bits (176), Expect = 5e-10
 Identities = 44/127 (34%), Positives = 63/127 (49%), Gaps = 17/127 (13%)
 Frame = -3

Query: 1733 VWFIGGIAMRMFKWTPYFQVDV-ESSLVPVWIKFPRLPIQFFQNEA-------------L 1596
            +W I   +M + KW P  Q ++ E S VPVW+ F  +P QF+  E              L
Sbjct: 1    MWHIDNQSMFVAKWKPGLQPEIPELSSVPVWLDFHNVPPQFYSEEGLEHIAGTLGHPLFL 60

Query: 1595 FPATSTLKRLSVARIQVEIDLLKPRPEKI*IKIGTRVGYWQKVEYD---IPPYCKHCWYV 1425
             PAT+ +  L VAR+   ID  KP PE + ++  +  G+ ++VE     +PP C HC  V
Sbjct: 61   HPATANMSNLEVARVFTIIDPTKPLPEAVNVRFDS--GHIERVEVSSPWLPPTCDHCKEV 118

Query: 1424 GHQENFC 1404
            GH    C
Sbjct: 119  GHSIKNC 125


>gb|AAC28216.1| T24M8.9 gene product [Arabidopsis thaliana]
            gi|7267147|emb|CAB80815.1| putative protein [Arabidopsis
            thaliana]
          Length = 463

 Score = 64.7 bits (156), Expect = 1e-07
 Identities = 42/135 (31%), Positives = 62/135 (45%), Gaps = 17/135 (12%)
 Frame = -3

Query: 1751 RLYSPQVWFIGGIAMRMFKWTPYFQ-VDVESSLVPVWIKFPRLPIQFFQNEAL------- 1596
            R+ S ++W I G  M + KW P    V  E +  P+W++   +P QFF +  L       
Sbjct: 171  RVLSQRLWQIDGQTMFVAKWEPGLTPVKPELTTAPIWLELRHVPFQFFNDNGLEHIASLV 230

Query: 1595 ------FPATSTLKRLSVARIQVEIDLLKPRPEKI*IKIGTRVGYWQKVEYD---IPPYC 1443
                   P+T+    L VAR+   ID  KP PE + +   +  G  +++E     +PP C
Sbjct: 231  GEPKFLHPSTANKTNLEVARVFTIIDPRKPLPEAVNVHFAS--GDIRRIEVSSPWMPPVC 288

Query: 1442 KHCWYVGHQENFCHV 1398
             HC  VGH    C V
Sbjct: 289  AHCKEVGHSLRKCKV 303


>emb|CAB81573.1| putative protein [Arabidopsis thaliana]
          Length = 510

 Score = 61.6 bits (148), Expect = 8e-07
 Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 25/214 (11%)
 Frame = -3

Query: 1871 PSVDNIHKYLSALDFKGDFN--VSLMDNRHV*IHFRIEEDYLR--LYSPQVWFIGGIAMR 1704
            P V  IH  ++ +   GD +  + +++     + FR+  + +R  + + ++W I G+ M 
Sbjct: 139  PHVGKIHMIVNKIWRLGDKSTLIDVLEVNESTVKFRVRNEAMRHRILNRRMWNIMGLPMI 198

Query: 1703 MFKWTPYFQVDVESSL--VPVWIKFPRLPIQFFQNEA-------------LFPATSTLKR 1569
            + KWTPY + DV+ +L  +P+W+    +P+  F ++              L P T   + 
Sbjct: 199  ISKWTPYSE-DVQPALKSIPLWVTLSNVPLTMFTDKGLEFLASVVGKPVRLHPKTEACES 257

Query: 1568 LSVARIQVEIDLLKPRPEKI*IKIGTRVGYWQKV-EYDIP---PYCKHCWYVGHQENFCH 1401
               A+I VE DL K  P++  I  G   G    V  Y  P   P+C+ C   GH  + C 
Sbjct: 258  FEEAKILVEADLTKDLPKEY-ILSGEEEGELDAVIHYSYPWLSPHCQVCKKWGHLRDSCL 316

Query: 1400 VNNPELKVSVMQNN--SDTRPLN*WVQKSQGKTK 1305
            +   +   S + N+  S+  P    V+++   TK
Sbjct: 317  LEK-QKPTSTLNNSPVSEKEPQKIVVEEAHVSTK 349


>emb|CCA65980.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 390

 Score = 61.2 bits (147), Expect = 1e-06
 Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 15/133 (11%)
 Frame = -3

Query: 1772 RIEEDYLRLYSPQVWFIGGIAMRMFKWTPYFQVDVE-SSLVPVWIKFPRLPIQFFQNEAL 1596
            R E D +    P +++  G AM + +W+  F    E   ++P+W+K P LP+  +  ++L
Sbjct: 137  REERDKILFSGPHLFY--GKAMIVKQWSANFNFHEEVQKVIPIWVKLPNLPLNCWGEDSL 194

Query: 1595 FPATSTLK-------------RLSVARIQVEIDLLKPRPEKI*IKIGTRVGYWQKVEYD- 1458
                S L              R+S AR+ VE+D+ +  P  + ++    V + QK+EYD 
Sbjct: 195  SRIGSVLGVPLYADECTSKGLRVSYARMLVEMDVTQEIPITVAVEDPNGVVFKQKLEYDW 254

Query: 1457 IPPYCKHCWYVGH 1419
            +P +CK C  VGH
Sbjct: 255  VPHFCKKCQMVGH 267


>emb|CAB10338.1| hypothetical protein [Arabidopsis thaliana]
           gi|7268308|emb|CAB78602.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 655

 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 39/109 (35%), Positives = 57/109 (52%), Gaps = 5/109 (4%)
 Frame = -1

Query: 409 GDRADEFWYRLGFQNPM----VSDSLKIWVFWRHDMV-IEA*SQSEQFIHLSCHHISLAT 245
           GDRA     RLGF+N      V  S  +W+ WR  +  +E  S + QFIH     ++   
Sbjct: 548 GDRAGRICQRLGFENQFRVDAVGQSSGLWLLWRSSVGNVEIVSSTSQFIHAKI--LTGLE 605

Query: 244 LSYITAVYAKCSVSERRLLWADLQHIQNSVGDTPWFLGGDFNAIVLMEE 98
             ++  VYA  SVS R  LW +L+   + + D P  +GGDFN I+ ++E
Sbjct: 606 SVHLVVVYAAPSVSRRSGLWNELREAVSGL-DGPLIIGGDFNTILRVDE 653


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