BLASTX nr result

ID: Cephaelis21_contig00023260 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00023260
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298313.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-09
ref|XP_002519712.1| mads box protein, putative [Ricinus communis...    65   6e-09
ref|XP_002879499.1| MADS-box family protein [Arabidopsis lyrata ...    63   2e-08
ref|XP_002305333.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08
ref|XP_003628271.1| MADS-box transcription factor [Medicago trun...    63   2e-08

>ref|XP_002298313.1| predicted protein [Populus trichocarpa] gi|222845571|gb|EEE83118.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 28/42 (66%), Positives = 36/42 (85%)
 Frame = +3

Query: 288 RMVTFSKRRKGLFKKADELQTRTGANVAIVVFSPAGKPYAYG 413
           R++TFSKRR G++KKA EL T TGA +AI VFSPAGKP+++G
Sbjct: 23  RLITFSKRRSGIYKKASELATLTGAEIAIAVFSPAGKPFSFG 64


>ref|XP_002519712.1| mads box protein, putative [Ricinus communis]
           gi|223541129|gb|EEF42685.1| mads box protein, putative
           [Ricinus communis]
          Length = 172

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 31/51 (60%), Positives = 38/51 (74%)
 Frame = +3

Query: 285 SRMVTFSKRRKGLFKKADELQTRTGANVAIVVFSPAGKPYAYGDARLMNAA 437
           SR VTFSKRR GLFKKA+EL T   A +AIVVFSP GKP+++G   + + A
Sbjct: 16  SRQVTFSKRRTGLFKKANELATLCAAQIAIVVFSPGGKPFSFGHPTVQSVA 66


>ref|XP_002879499.1| MADS-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297325338|gb|EFH55758.1| MADS-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 172

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 31/51 (60%), Positives = 36/51 (70%)
 Frame = +3

Query: 285 SRMVTFSKRRKGLFKKADELQTRTGANVAIVVFSPAGKPYAYGDARLMNAA 437
           +R VTFSKRR GLFKKA EL T   A + IVVFSP GKP++YG   L + A
Sbjct: 16  TRQVTFSKRRTGLFKKASELATLCNAELGIVVFSPGGKPFSYGKPNLDSVA 66


>ref|XP_002305333.1| predicted protein [Populus trichocarpa] gi|222848297|gb|EEE85844.1|
           predicted protein [Populus trichocarpa]
          Length = 178

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 28/43 (65%), Positives = 35/43 (81%)
 Frame = +3

Query: 285 SRMVTFSKRRKGLFKKADELQTRTGANVAIVVFSPAGKPYAYG 413
           SR VTFSKRR G+FKKA+EL T  G  +AI+VFSP GKP+++G
Sbjct: 16  SRQVTFSKRRTGVFKKANELATLCGVQIAIIVFSPGGKPFSFG 58


>ref|XP_003628271.1| MADS-box transcription factor [Medicago truncatula]
           gi|355522293|gb|AET02747.1| MADS-box transcription
           factor [Medicago truncatula]
          Length = 181

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 32/63 (50%), Positives = 41/63 (65%)
 Frame = +3

Query: 288 RMVTFSKRRKGLFKKADELQTRTGANVAIVVFSPAGKPYAYGDARLMNAALEAWSGSCSK 467
           R VTFSKRR GLFKKA+EL    GA +AIVVFSP  KPY++G   + + A +      + 
Sbjct: 17  RQVTFSKRRTGLFKKANELAILCGAEIAIVVFSPGNKPYSFGHPSVDDVASKFLEEELNL 76

Query: 468 DNG 476
           D+G
Sbjct: 77  DDG 79


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