BLASTX nr result

ID: Cephaelis21_contig00023259 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00023259
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519712.1| mads box protein, putative [Ricinus communis...    66   3e-09
ref|XP_002298313.1| predicted protein [Populus trichocarpa] gi|2...    65   7e-09
ref|XP_002519715.1| mads box protein, putative [Ricinus communis...    64   1e-08
ref|XP_002879499.1| MADS-box family protein [Arabidopsis lyrata ...    64   1e-08
ref|XP_003628271.1| MADS-box transcription factor [Medicago trun...    64   1e-08

>ref|XP_002519712.1| mads box protein, putative [Ricinus communis]
           gi|223541129|gb|EEF42685.1| mads box protein, putative
           [Ricinus communis]
          Length = 172

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 32/52 (61%), Positives = 40/52 (76%)
 Frame = -3

Query: 202 TSRMVTFSKRRKGLFKKADELQTRTGANVAIVVFSPTGKPYAYGDARLMNVA 47
           +SR VTFSKRR GLFKKA+EL T   A +AIVVFSP GKP+++G   + +VA
Sbjct: 15  SSRQVTFSKRRTGLFKKANELATLCAAQIAIVVFSPGGKPFSFGHPTVQSVA 66


>ref|XP_002298313.1| predicted protein [Populus trichocarpa] gi|222845571|gb|EEE83118.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 28/52 (53%), Positives = 39/52 (75%)
 Frame = -3

Query: 205 ETSRMVTFSKRRKGLFKKADELQTRTGANVAIVVFSPTGKPYAYGDARLMNV 50
           +  R++TFSKRR G++KKA EL T TGA +AI VFSP GKP+++G   + +V
Sbjct: 20  QDDRLITFSKRRSGIYKKASELATLTGAEIAIAVFSPAGKPFSFGHPSVESV 71


>ref|XP_002519715.1| mads box protein, putative [Ricinus communis]
           gi|223541132|gb|EEF42688.1| mads box protein, putative
           [Ricinus communis]
          Length = 220

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 29/53 (54%), Positives = 39/53 (73%)
 Frame = -3

Query: 205 ETSRMVTFSKRRKGLFKKADELQTRTGANVAIVVFSPTGKPYAYGDARLMNVA 47
           E  R++TFSKRR G++KKA EL T  GA V I+VFSP GKP+++G   L ++A
Sbjct: 21  EEDRLITFSKRRSGIYKKASELITLCGAEVGILVFSPAGKPFSFGHPSLESIA 73


>ref|XP_002879499.1| MADS-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297325338|gb|EFH55758.1| MADS-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 172

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 32/51 (62%), Positives = 37/51 (72%)
 Frame = -3

Query: 199 SRMVTFSKRRKGLFKKADELQTRTGANVAIVVFSPTGKPYAYGDARLMNVA 47
           +R VTFSKRR GLFKKA EL T   A + IVVFSP GKP++YG   L +VA
Sbjct: 16  TRQVTFSKRRTGLFKKASELATLCNAELGIVVFSPGGKPFSYGKPNLDSVA 66


>ref|XP_003628271.1| MADS-box transcription factor [Medicago truncatula]
           gi|355522293|gb|AET02747.1| MADS-box transcription
           factor [Medicago truncatula]
          Length = 181

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 33/63 (52%), Positives = 42/63 (66%)
 Frame = -3

Query: 196 RMVTFSKRRKGLFKKADELQTRTGANVAIVVFSPTGKPYAYGDARLMNVALEAWSGSCSK 17
           R VTFSKRR GLFKKA+EL    GA +AIVVFSP  KPY++G   + +VA +      + 
Sbjct: 17  RQVTFSKRRTGLFKKANELAILCGAEIAIVVFSPGNKPYSFGHPSVDDVASKFLEEELNL 76

Query: 16  DNG 8
           D+G
Sbjct: 77  DDG 79


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