BLASTX nr result

ID: Cephaelis21_contig00023229 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00023229
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptas...    75   5e-12
gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis ...    69   4e-10
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]              68   7e-10
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]              68   7e-10
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]              68   9e-10

>gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptase);
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 729

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 40/127 (31%), Positives = 68/127 (53%)
 Frame = +1

Query: 7   EMVAPNGEWNWNLLESVLEINLVHFIAAVPVPHPNNEPDKCVGRDSSGGKFSTAKAYVRI 186
           + +  +G W+ N L   L +++V+ I A+P P   + PD      ++  KF+   AY  +
Sbjct: 394 DAINTSGVWDLNFLMDNLHVDIVNQILALPTPSDFDGPDTIGWGGTNTLKFTVQSAY-NL 452

Query: 187 AQCSWNPPSSEAKSIWKLVVPQRVKSFLWLALKQRLMTNENRAKRGLSDTTDCPQCNRSP 366
            Q +      + K++W    P R+++F+WLA   R++TN  R+K G+  +  CP C R  
Sbjct: 453 QQENPFAVGGDWKTLWNWKGPHRIQTFIWLAAHGRILTNYRRSKWGVGISPTCPCCARED 512

Query: 367 ETTLHVL 387
           ET +HVL
Sbjct: 513 ETVIHVL 519


>gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis cebennensis]
          Length = 799

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 39/106 (36%), Positives = 56/106 (52%), Gaps = 4/106 (3%)
 Frame = +1

Query: 82  IAAVPVPHPNNEPDKCVGRDSSGGKFSTAKAYVRIAQCSWNPPSSEAKS----IWKLVVP 249
           + AV V +     D+    +S  GKF+   AY  + +   N P S+       +WK++ P
Sbjct: 419 LKAVVVDNITGVRDRLSWGESLDGKFTVKSAYSSLMKD--NTPRSDLSRMYDRVWKVIAP 476

Query: 250 QRVKSFLWLALKQRLMTNENRAKRGLSDTTDCPQCNRSPETTLHVL 387
           +RVK FLWL + Q +MTN  R +R LSDT  C  C    ET +H+L
Sbjct: 477 ERVKIFLWLGVHQVIMTNMERQRRHLSDTGICQVCKGGDETIIHIL 522


>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 34/126 (26%), Positives = 60/126 (47%)
 Frame = +1

Query: 7    EMVAPNGEWNWNLLESVLEINLVHFIAAVPVPHPNNEPDKCVGRDSSGGKFSTAKAYVRI 186
            +++     W+   L ++L  N++  + A P+   + + D      S+ G  + + AY  I
Sbjct: 968  DLITSQRRWDTGALHNILPTNMIDMVRATPIAINSEQEDFLSWPHSTTGMVTVSSAYSLI 1027

Query: 187  AQCSWNPPSSEAKSIWKLVVPQRVKSFLWLALKQRLMTNENRAKRGLSDTTDCPQCNRSP 366
            A    +  S +   IW+    +++K F+W  +K  LM N  R +RGL+D   CP C    
Sbjct: 1028 AGHDGDDRSHDW--IWRATCTEKIKLFMWKIVKNGLMVNVERKRRGLADAASCPVCGEED 1085

Query: 367  ETTLHV 384
            ET  H+
Sbjct: 1086 ETLDHL 1091


>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 34/126 (26%), Positives = 60/126 (47%)
 Frame = +1

Query: 7    EMVAPNGEWNWNLLESVLEINLVHFIAAVPVPHPNNEPDKCVGRDSSGGKFSTAKAYVRI 186
            +++     W+   L ++L  N++  + A P+   + + D      S+ G  + + AY  I
Sbjct: 968  DLITSQRRWDTGALHNILPTNMIDMVRATPIAINSEQEDFLSWPHSTTGMVTVSSAYSLI 1027

Query: 187  AQCSWNPPSSEAKSIWKLVVPQRVKSFLWLALKQRLMTNENRAKRGLSDTTDCPQCNRSP 366
            A    +  S +   IW+    +++K F+W  +K  LM N  R +RGL+D   CP C    
Sbjct: 1028 AGHDGDDRSHDW--IWRATCTEKIKLFMWKIVKNGLMVNVERKRRGLADAASCPVCGEED 1085

Query: 367  ETTLHV 384
            ET  H+
Sbjct: 1086 ETLDHL 1091


>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
          Length = 1898

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 35/126 (27%), Positives = 60/126 (47%)
 Frame = +1

Query: 7    EMVAPNGEWNWNLLESVLEINLVHFIAAVPVPHPNNEPDKCVGRDSSGGKFSTAKAYVRI 186
            ++      W+   L ++L IN++  + A P+   + + D      S+ G  + + AY  I
Sbjct: 1500 DLTTSQRRWDTGALHNILPINMIDMVRATPIAINSEQEDFPSWPHSTTGMVTVSSAYSLI 1559

Query: 187  AQCSWNPPSSEAKSIWKLVVPQRVKSFLWLALKQRLMTNENRAKRGLSDTTDCPQCNRSP 366
            A    +  S +   IW+    +++K F+W  +K  LM N  R +RGL+D   CP C    
Sbjct: 1560 AGHDGDGRSHDW--IWRATCTEKIKLFMWKIVKNGLMVNVERKRRGLADAASCPVCGEED 1617

Query: 367  ETTLHV 384
            ET  H+
Sbjct: 1618 ETLDHL 1623


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