BLASTX nr result

ID: Cephaelis21_contig00023207 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00023207
         (1144 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531985.1| Ubiquitin ligase protein FANCL, putative [Ri...   353   6e-95
ref|XP_002310876.1| predicted protein [Populus trichocarpa] gi|2...   337   3e-90
ref|XP_003559474.1| PREDICTED: E3 ubiquitin-protein ligase FANCL...   327   4e-87
ref|XP_002463953.1| hypothetical protein SORBIDRAFT_01g009490 [S...   316   8e-84
ref|NP_001131416.1| uncharacterized protein LOC100192745 [Zea ma...   315   2e-83

>ref|XP_002531985.1| Ubiquitin ligase protein FANCL, putative [Ricinus communis]
           gi|223528344|gb|EEF30384.1| Ubiquitin ligase protein
           FANCL, putative [Ricinus communis]
          Length = 309

 Score =  353 bits (905), Expect = 6e-95
 Identities = 157/239 (65%), Positives = 194/239 (81%)
 Frame = +2

Query: 2   DKKGRVHVLEITLDSSYPECPPSVSADVPQIFNLNWSTKSKLKDVVTQFQQHLDKLQDFW 181
           DKKGRVH+LE+ LD ++P  PPSVSADVP IF++ WS  S+LKD++ QF +HL+KLQ+FW
Sbjct: 19  DKKGRVHILEVQLDETHPRHPPSVSADVPYIFSVRWSMNSRLKDLMQQFHEHLEKLQEFW 78

Query: 182 STLDDIDKSLWVVDPKHSCLAMSYRQIYIGNDCYVMLSLNANDPRSLPECRFLGSDSNVS 361
           STL+DID SL VVD   S  A+S+RQI IGNDC++ML +N  DPRSLPECRFLGS     
Sbjct: 79  STLEDIDNSLCVVDIHKSSHAISFRQIDIGNDCFIMLFINTKDPRSLPECRFLGSGPVAH 138

Query: 362 LWRKTWQRNCKRWNRDKSFSDNLASVLNIQLPEPHNASKNDQRTECGVCYAQCLPVDDEF 541
             RK WQRNCK+W +DK+F +NL S+L  +LP+P +  KNDQ+ ECG+CYAQ LP+DDE 
Sbjct: 139 SLRKRWQRNCKQWMQDKTFLENLLSILETELPKPPDVQKNDQQIECGICYAQYLPIDDEL 198

Query: 542 GSNSGASTDYTCENSNCNRAFHSVCLGDWLRSITTTRRSFDVMFGNCPYCSNPVAVQVN 718
           G  SG  TDYTC+NSNCNRAFHS+CLGDWLRSITTTR+S++V+FGNCPYCS PVAV++N
Sbjct: 199 GPRSGTGTDYTCDNSNCNRAFHSICLGDWLRSITTTRQSYNVLFGNCPYCSEPVAVKIN 257


>ref|XP_002310876.1| predicted protein [Populus trichocarpa] gi|222853779|gb|EEE91326.1|
           predicted protein [Populus trichocarpa]
          Length = 270

 Score =  337 bits (865), Expect = 3e-90
 Identities = 153/241 (63%), Positives = 194/241 (80%)
 Frame = +2

Query: 2   DKKGRVHVLEITLDSSYPECPPSVSADVPQIFNLNWSTKSKLKDVVTQFQQHLDKLQDFW 181
           DKKGRVH++EI LD +YP+ PPSVSA+VP IFN+ WS KS+LKD+V QF++HL++LQ+FW
Sbjct: 26  DKKGRVHIMEIQLDKTYPQKPPSVSAEVPYIFNVKWSVKSRLKDLVLQFREHLEELQEFW 85

Query: 182 STLDDIDKSLWVVDPKHSCLAMSYRQIYIGNDCYVMLSLNANDPRSLPECRFLGSDSNVS 361
           STL+DID SL V + K    A + RQI IGNDC +MLS+NA DPRSLPECRF+GS   V+
Sbjct: 86  STLEDIDHSLCVTNKKKLSRATTCRQIDIGNDCSIMLSINARDPRSLPECRFMGSGPVVN 145

Query: 362 LWRKTWQRNCKRWNRDKSFSDNLASVLNIQLPEPHNASKNDQRTECGVCYAQCLPVDDEF 541
             RK W RN KRW +DK+  +NLA +L  +LP P +  +NDQ+ ECG+CYAQ LP+D+E 
Sbjct: 146 PVRKLWLRNNKRWMKDKTLPENLAFILETELPRPSHVLENDQQVECGICYAQYLPIDEEL 205

Query: 542 GSNSGASTDYTCENSNCNRAFHSVCLGDWLRSITTTRRSFDVMFGNCPYCSNPVAVQVNT 721
           GS SGA TD+TC+N++C RAFH+VCL DWLRSITTTR+SFDV+FGNCPYCS PVAV++N 
Sbjct: 206 GSRSGAGTDHTCDNTSCGRAFHTVCLVDWLRSITTTRQSFDVLFGNCPYCSEPVAVKLND 265

Query: 722 R 724
           +
Sbjct: 266 K 266


>ref|XP_003559474.1| PREDICTED: E3 ubiquitin-protein ligase FANCL-like [Brachypodium
           distachyon]
          Length = 311

 Score =  327 bits (837), Expect = 4e-87
 Identities = 144/239 (60%), Positives = 192/239 (80%), Gaps = 1/239 (0%)
 Frame = +2

Query: 2   DKKGRVHVLEITLDSSYPECPPSVSADVPQIFNLNWSTKSKLKDVVTQFQQHLDKLQDFW 181
           D++GR H+LE+TL  +YP CPPS+SADVP +  L WS  S+LKDVV QFQ+HL  LQ++W
Sbjct: 70  DEQGRQHLLEVTLPMNYPACPPSISADVPCLPKLQWSKLSRLKDVVCQFQEHLKNLQNYW 129

Query: 182 STLDDIDKSLWVVDPKHSCLAMSYRQIYIGNDCYVMLSLNANDPRSLPECRFLGSDSNVS 361
            T+DDIDK+LWVVDP     AMS+R+I +G+DCY++L ++A+ P SLPECRFLG+D  + 
Sbjct: 130 CTMDDIDKALWVVDPTKPSYAMSHRRIALGDDCYILLHVDAHKPSSLPECRFLGTDGKLE 189

Query: 362 LWRKTWQRNCKRWNRDKSFSDNLASVLNIQLPEPHNAS-KNDQRTECGVCYAQCLPVDDE 538
              K W++N KRW  DK F +NL++VL+ +LP+P + S K+DQ+ +CG+CYA  LP+DDE
Sbjct: 190 RLIKNWRKNRKRWTADKKFHENLSTVLDFELPQPPSVSIKDDQQADCGICYATHLPIDDE 249

Query: 539 FGSNSGASTDYTCENSNCNRAFHSVCLGDWLRSITTTRRSFDVMFGNCPYCSNPVAVQV 715
            G++SG +TDYTCENS+C+RAFHSVCL DWL +ITTTR+SFDV+FGNCPYCS PVAV++
Sbjct: 250 LGTDSGCATDYTCENSSCDRAFHSVCLRDWLCTITTTRQSFDVLFGNCPYCSEPVAVKI 308


>ref|XP_002463953.1| hypothetical protein SORBIDRAFT_01g009490 [Sorghum bicolor]
           gi|241917807|gb|EER90951.1| hypothetical protein
           SORBIDRAFT_01g009490 [Sorghum bicolor]
          Length = 361

 Score =  316 bits (809), Expect = 8e-84
 Identities = 140/241 (58%), Positives = 186/241 (77%), Gaps = 3/241 (1%)
 Frame = +2

Query: 2   DKKGRVHVLEITLDSSYPECPPSVSADVPQIFNLNWSTKSKLKDVVTQFQQHLDKLQDFW 181
           D+ GR+H+LEITL   YPECPPS+SAD+P +  + WS  S+LKDV+ QFQ HL  LQ+FW
Sbjct: 118 DEAGRIHLLEITLPMGYPECPPSISADIPYLPKIQWSKSSRLKDVLCQFQAHLKILQEFW 177

Query: 182 STLDDIDKSLWVVDPKHSCLAMSYRQIYIGNDCYVMLSLNANDPRSLPECRFLGSDSNVS 361
           ST+D+IDK LW+VDP     AMS+R+I +G+DCY++L ++A  P SLPECRFLG+D  + 
Sbjct: 178 STMDEIDKVLWIVDPTKPSYAMSHRRISLGDDCYILLHVDARKPNSLPECRFLGTDDKLD 237

Query: 362 LWRKTWQRNCKRWNRDKSFSDNLASVLNIQLPEPHNAS---KNDQRTECGVCYAQCLPVD 532
                W++N K+W+  K F +NL +VL+  LP P   S   K+D++ +CG+CYA+ LPVD
Sbjct: 238 QLIINWRKNRKKWDAKKKFHENLTAVLDFALPAPPLVSCNVKDDEQADCGICYAKHLPVD 297

Query: 533 DEFGSNSGASTDYTCENSNCNRAFHSVCLGDWLRSITTTRRSFDVMFGNCPYCSNPVAVQ 712
           DE G++SG  TDYTCEN +C+RAFHSVCL DWLRSIT+TR+SFDV+FGNCPYCS+PVAV+
Sbjct: 298 DELGAHSGCVTDYTCENPSCSRAFHSVCLRDWLRSITSTRQSFDVLFGNCPYCSDPVAVK 357

Query: 713 V 715
           +
Sbjct: 358 I 358


>ref|NP_001131416.1| uncharacterized protein LOC100192745 [Zea mays]
           gi|194691460|gb|ACF79814.1| unknown [Zea mays]
           gi|413933185|gb|AFW67736.1| ubiquitin ligase protein
           FANCL [Zea mays]
          Length = 322

 Score =  315 bits (806), Expect = 2e-83
 Identities = 139/241 (57%), Positives = 188/241 (78%), Gaps = 3/241 (1%)
 Frame = +2

Query: 2   DKKGRVHVLEITLDSSYPECPPSVSADVPQIFNLNWSTKSKLKDVVTQFQQHLDKLQDFW 181
           D+ GR+H+LEITL   YPE PPS+SADVP +  ++WS  S+LKDV+ QFQ HL  LQ+FW
Sbjct: 79  DEPGRMHLLEITLPMGYPESPPSISADVPYLPKIHWSKNSRLKDVICQFQAHLKILQEFW 138

Query: 182 STLDDIDKSLWVVDPKHSCLAMSYRQIYIGNDCYVMLSLNANDPRSLPECRFLGSDSNVS 361
           +T+D+IDK LW+VDP     AMS+R+I +G+DCY++L ++A  P SLPECRFLG+D  + 
Sbjct: 139 NTMDEIDKVLWIVDPTKPSYAMSHRRIALGDDCYILLQVDARKPNSLPECRFLGTDGKLD 198

Query: 362 LWRKTWQRNCKRWNRDKSFSDNLASVLNIQLPEPHNA---SKNDQRTECGVCYAQCLPVD 532
                W++N K+W+  K F +NLA+VL+  LP P +    +K+D++ +CG+CYA+ LPVD
Sbjct: 199 QLIINWRKNRKKWDTKKKFHENLAAVLDFALPSPPSVGDKAKDDEQADCGICYAKHLPVD 258

Query: 533 DEFGSNSGASTDYTCENSNCNRAFHSVCLGDWLRSITTTRRSFDVMFGNCPYCSNPVAVQ 712
           DE G++SG +TDY CEN +C+RAFHSVCL DWLRSITTTR+SFDV+FGNCPYCS+PVAV+
Sbjct: 259 DELGAHSGCATDYMCENPSCSRAFHSVCLRDWLRSITTTRQSFDVLFGNCPYCSDPVAVK 318

Query: 713 V 715
           +
Sbjct: 319 I 319


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