BLASTX nr result

ID: Cephaelis21_contig00023185 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00023185
         (783 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25845.3| unnamed protein product [Vitis vinifera]               43   9e-07
emb|CAN71402.1| hypothetical protein VITISV_006284 [Vitis vinifera]    40   1e-06
ref|XP_002283959.1| PREDICTED: replication protein A 70 kDa DNA-...    40   1e-06
emb|CBI15109.3| unnamed protein product [Vitis vinifera]               40   1e-06
ref|NP_001141474.1| uncharacterized protein LOC100273584 [Zea ma...    41   2e-06

>emb|CBI25845.3| unnamed protein product [Vitis vinifera]
          Length = 131

 Score = 43.1 bits (100), Expect(2) = 9e-07
 Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
 Frame = +2

Query: 107 ALTPKTQNNLSSVTESSFFML----SVIQPCEKKRQHQAWRTCSKKMRGDIGSGYWGEGC 274
           +L+  T N      + SFF +    S I+P ++   ++A +TC+KK+ G IGSGYW EGC
Sbjct: 25  SLSHVTSNPYLGEDKPSFFSIRAYISFIKP-DQTMWYRACKTCNKKVTGAIGSGYWCEGC 83



 Score = 36.2 bits (82), Expect(2) = 9e-07
 Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
 Frame = +3

Query: 345 NAKEC---LFLICELSDPWDETWLSVFNEETGKFLVCSANVINKLK 473
           N  EC     ++ ++SD   E WLS+FNE+  +   CSA+  +KLK
Sbjct: 86  NDDECSLRYIMVVKVSDASGEAWLSMFNEQAERIFGCSADEPDKLK 131


>emb|CAN71402.1| hypothetical protein VITISV_006284 [Vitis vinifera]
          Length = 634

 Score = 40.0 bits (92), Expect(2) = 1e-06
 Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
 Frame = +2

Query: 107 ALTPKTQNNLSSVTESSFFML----SVIQPCEKKRQHQAWRTCSKKMRGDIGSGYWGEGC 274
           +L+  T N      + SFF +    S I+P ++   ++A +TC+KK+   IGSGYW EGC
Sbjct: 460 SLSHVTSNPSLGEDKPSFFSIRAYISFIKP-DQTMWYRACKTCNKKVTDAIGSGYWCEGC 518



 Score = 38.9 bits (89), Expect(2) = 1e-06
 Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 3/48 (6%)
 Frame = +3

Query: 345 NAKEC---LFLICELSDPWDETWLSVFNEETGKFLVCSANVINKLKTK 479
           N  EC     ++ ++SD   E WLS+FNE+  +   CSA+ ++KLK++
Sbjct: 521 NDDECSLRYIMVVKVSDASGEAWLSLFNEQAERMFGCSADELDKLKSQ 568


>ref|XP_002283959.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit isoform
           1 [Vitis vinifera]
          Length = 625

 Score = 40.0 bits (92), Expect(2) = 1e-06
 Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
 Frame = +2

Query: 107 ALTPKTQNNLSSVTESSFFML----SVIQPCEKKRQHQAWRTCSKKMRGDIGSGYWGEGC 274
           +L+  T N      + SFF +    S I+P ++   ++A +TC+KK+   IGSGYW EGC
Sbjct: 451 SLSHVTSNPSLGEDKPSFFSIRAYISFIKP-DQTMWYRACKTCNKKVTDAIGSGYWCEGC 509



 Score = 38.9 bits (89), Expect(2) = 1e-06
 Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 3/48 (6%)
 Frame = +3

Query: 345 NAKEC---LFLICELSDPWDETWLSVFNEETGKFLVCSANVINKLKTK 479
           N  EC     ++ ++SD   E WLS+FNE+  +   CSA+ ++KLK++
Sbjct: 512 NDDECSLRYIMVVKVSDASGEAWLSLFNEQAERMFGCSADELDKLKSQ 559


>emb|CBI15109.3| unnamed protein product [Vitis vinifera]
          Length = 602

 Score = 40.0 bits (92), Expect(2) = 1e-06
 Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
 Frame = +2

Query: 107 ALTPKTQNNLSSVTESSFFML----SVIQPCEKKRQHQAWRTCSKKMRGDIGSGYWGEGC 274
           +L+  T N      + SFF +    S I+P ++   ++A +TC+KK+   IGSGYW EGC
Sbjct: 428 SLSHVTSNPSLGEDKPSFFSIRAYISFIKP-DQTMWYRACKTCNKKVTDAIGSGYWCEGC 486



 Score = 38.9 bits (89), Expect(2) = 1e-06
 Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 3/48 (6%)
 Frame = +3

Query: 345 NAKEC---LFLICELSDPWDETWLSVFNEETGKFLVCSANVINKLKTK 479
           N  EC     ++ ++SD   E WLS+FNE+  +   CSA+ ++KLK++
Sbjct: 489 NDDECSLRYIMVVKVSDASGEAWLSLFNEQAERMFGCSADELDKLKSQ 536


>ref|NP_001141474.1| uncharacterized protein LOC100273584 [Zea mays]
           gi|194704722|gb|ACF86445.1| unknown [Zea mays]
           gi|195647462|gb|ACG43199.1| replication protein A 70 kDa
           DNA-binding subunit [Zea mays]
           gi|413956552|gb|AFW89201.1| Replication protein A
           DNA-binding subunit [Zea mays]
          Length = 623

 Score = 41.2 bits (95), Expect(2) = 2e-06
 Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
 Frame = +3

Query: 345 NAKEC---LFLICELSDPWDETWLSVFNEETGKFLVCSANVINKLK 473
           N  EC     ++ +LSDP  E W+SVFNE   K + CSA+ +++++
Sbjct: 512 NYSECSLRYIMVIKLSDPTGEAWVSVFNEHAEKIIGCSADELDRIR 557



 Score = 36.6 bits (83), Expect(2) = 2e-06
 Identities = 17/41 (41%), Positives = 27/41 (65%)
 Frame = +2

Query: 152 SSFFMLSVIQPCEKKRQHQAWRTCSKKMRGDIGSGYWGEGC 274
           S + ++S I+P ++   ++A  TC+KK+    GSGYW EGC
Sbjct: 470 SLYAIISHIKP-DQNMWYRACTTCNKKVTEAFGSGYWCEGC 509


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