BLASTX nr result

ID: Cephaelis21_contig00023173 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00023173
         (1073 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_200746.1| methyl-CPG-binding domain 6 protein [Arabidopsi...   106   9e-21
ref|XP_002864630.1| hypothetical protein ARALYDRAFT_919168 [Arab...   103   6e-20
ref|XP_003632148.1| PREDICTED: methyl-CpG-binding domain-contain...   100   5e-19
emb|CBI16127.3| unnamed protein product [Vitis vinifera]              100   5e-19
ref|XP_002875791.1| hypothetical protein ARALYDRAFT_485028 [Arab...    96   2e-17

>ref|NP_200746.1| methyl-CPG-binding domain 6 protein [Arabidopsis thaliana]
           gi|75180469|sp|Q9LTJ1.1|MBD6_ARATH RecName:
           Full=Methyl-CpG-binding domain-containing protein 6;
           Short=AtMBD6; Short=MBD06; AltName:
           Full=Methyl-CpG-binding protein MBD6
           gi|8885544|dbj|BAA97474.1| unnamed protein product
           [Arabidopsis thaliana] gi|28416643|gb|AAO42852.1|
           At5g59380 [Arabidopsis thaliana]
           gi|110743343|dbj|BAE99559.1| hypothetical protein
           [Arabidopsis thaliana] gi|332009795|gb|AED97178.1|
           methyl-CPG-binding domain 6 protein [Arabidopsis
           thaliana]
          Length = 225

 Score =  106 bits (265), Expect = 9e-21
 Identities = 53/144 (36%), Positives = 83/144 (57%), Gaps = 3/144 (2%)
 Frame = +2

Query: 332 WLPKGWRMEVRVRNSGATAGTTDRYFISPS-GQRFRSKVEVLHYLETGSKRKNNKKSKTD 508
           WLP GWR+E ++R SGATAG+ D+Y+  P+ G++FRS+ EVL+YLE G+ ++  KK++  
Sbjct: 80  WLPPGWRVEDKIRTSGATAGSVDKYYYEPNTGRKFRSRTEVLYYLEHGTSKRGTKKAENT 139

Query: 509 SEATPXXXXXXXXXXXXXXN--PRDFSDLKFDFENPPQSVTWARAGSGDCPGDWVPSIGS 682
                                 P     L FDF+NPP  V+W+ A +G+    W+P+IG 
Sbjct: 140 YFNPDHFEGQGSNRVTRTATVPPPPPPPLDFDFKNPPDKVSWSMANAGE--EGWIPNIGD 197

Query: 683 TTLPESIRTEWGTAYSRIRKLDKS 754
             + +S+R +W TA++ I   + S
Sbjct: 198 VKVQDSVRRDWSTAFTFITSRNPS 221


>ref|XP_002864630.1| hypothetical protein ARALYDRAFT_919168 [Arabidopsis lyrata subsp.
           lyrata] gi|297310465|gb|EFH40889.1| hypothetical protein
           ARALYDRAFT_919168 [Arabidopsis lyrata subsp. lyrata]
          Length = 233

 Score =  103 bits (258), Expect = 6e-20
 Identities = 56/145 (38%), Positives = 83/145 (57%), Gaps = 4/145 (2%)
 Frame = +2

Query: 332 WLPKGWRMEVRVRNSGATAGTTDRYFISP-SGQRFRSKVEVLHYLETG-SKRKNNKKSKT 505
           WLP GWR+E ++R SGATAG+ D+Y+  P +G++FRS+ EVL+YLE G SKR   KK + 
Sbjct: 87  WLPPGWRVEDKIRTSGATAGSVDKYYYEPNTGRKFRSRTEVLYYLEHGTSKRGGTKKVEN 146

Query: 506 DSEATPXXXXXXXXXXXXXXN--PRDFSDLKFDFENPPQSVTWARAGSGDCPGDWVPSIG 679
               +                  P     L FDF+NPP+ V+W+ A +G+    W+P IG
Sbjct: 147 TDFLSDHFEGQGSNRARRKAKEPPPPPPPLDFDFKNPPEKVSWSMAKAGE--EAWIPIIG 204

Query: 680 STTLPESIRTEWGTAYSRIRKLDKS 754
              + +S+R +W TA++ I   + S
Sbjct: 205 DVKVQDSVRRDWSTAFTFITNRNPS 229


>ref|XP_003632148.1| PREDICTED: methyl-CpG-binding domain-containing protein 6-like
           [Vitis vinifera]
          Length = 297

 Score =  100 bits (250), Expect = 5e-19
 Identities = 56/137 (40%), Positives = 74/137 (54%), Gaps = 1/137 (0%)
 Frame = +2

Query: 320 EHPGWLPKGWRMEVRVRNSGATAGTTDRYFISP-SGQRFRSKVEVLHYLETGSKRKNNKK 496
           E   WLP GW +E RVR+SGA+AG+ D+YFI P +G+RFRSK EV +YLETG  RK  KK
Sbjct: 167 EREDWLPPGWIVEGRVRSSGASAGSRDKYFIEPITGRRFRSKKEVRYYLETGEVRKKPKK 226

Query: 497 SKTDSEATPXXXXXXXXXXXXXXNPRDFSDLKFDFENPPQSVTWARAGSGDCPGDWVPSI 676
           +  +S                         L F+FE+ P +V W R GS +    W P I
Sbjct: 227 NPDNS----------------PEKGTKSPPLNFNFEDVPDTVKWVRTGSSE---GWTPFI 267

Query: 677 GSTTLPESIRTEWGTAY 727
               +PES + +W  A+
Sbjct: 268 NGQEVPESSKRDWAAAF 284


>emb|CBI16127.3| unnamed protein product [Vitis vinifera]
          Length = 135

 Score =  100 bits (250), Expect = 5e-19
 Identities = 56/137 (40%), Positives = 74/137 (54%), Gaps = 1/137 (0%)
 Frame = +2

Query: 320 EHPGWLPKGWRMEVRVRNSGATAGTTDRYFISP-SGQRFRSKVEVLHYLETGSKRKNNKK 496
           E   WLP GW +E RVR+SGA+AG+ D+YFI P +G+RFRSK EV +YLETG  RK  KK
Sbjct: 5   EREDWLPPGWIVEGRVRSSGASAGSRDKYFIEPITGRRFRSKKEVRYYLETGEVRKKPKK 64

Query: 497 SKTDSEATPXXXXXXXXXXXXXXNPRDFSDLKFDFENPPQSVTWARAGSGDCPGDWVPSI 676
           +  +S                         L F+FE+ P +V W R GS +    W P I
Sbjct: 65  NPDNS----------------PEKGTKSPPLNFNFEDVPDTVKWVRTGSSE---GWTPFI 105

Query: 677 GSTTLPESIRTEWGTAY 727
               +PES + +W  A+
Sbjct: 106 NGQEVPESSKRDWAAAF 122


>ref|XP_002875791.1| hypothetical protein ARALYDRAFT_485028 [Arabidopsis lyrata subsp.
           lyrata] gi|297321629|gb|EFH52050.1| hypothetical protein
           ARALYDRAFT_485028 [Arabidopsis lyrata subsp. lyrata]
          Length = 181

 Score = 95.9 bits (237), Expect = 2e-17
 Identities = 57/161 (35%), Positives = 80/161 (49%), Gaps = 5/161 (3%)
 Frame = +2

Query: 269 ATPLSQRRPTRPVEETSEHPGWLPKGWRMEVRVRNSGATAGTTDRYFISP-SGQRFRSKV 445
           ATP+  +   R    T     WLP  WR EVRVR SG  AGT D+++  P +G++FRSK 
Sbjct: 16  ATPVDLKSRKRA---TPGDDNWLPPDWRTEVRVRTSGTKAGTVDKFYYEPITGRKFRSKN 72

Query: 446 EVLHYLETGSKRKNNKKSKTDSEATPXXXXXXXXXXXXXXNPR----DFSDLKFDFENPP 613
           EVL+YLE G+ +K  KK++     +               N +        L FDF N P
Sbjct: 73  EVLYYLEHGAPKKAVKKAENGDSLSEHSEGRGSIRRQTKSNKKANEPPPKPLNFDFLNVP 132

Query: 614 QSVTWARAGSGDCPGDWVPSIGSTTLPESIRTEWGTAYSRI 736
           + VTW   G       W+P IG   + ES+  +WG A++ +
Sbjct: 133 EKVTW--TGINGSEEAWLPFIGDYKIQESVSQDWGRAFTLV 171


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