BLASTX nr result

ID: Cephaelis21_contig00023165 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00023165
         (1499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264357.1| PREDICTED: high mobility group B protein 10 ...   316   1e-83
ref|XP_002531766.1| transcription factor, putative [Ricinus comm...   315   2e-83
ref|XP_002330570.1| high mobility group family [Populus trichoca...   309   1e-81
ref|XP_003592799.1| High mobility group protein B3 [Medicago tru...   244   4e-62
ref|XP_004139006.1| PREDICTED: high mobility group B protein 15-...   242   2e-61

>ref|XP_002264357.1| PREDICTED: high mobility group B protein 10 [Vitis vinifera]
            gi|296090037|emb|CBI39856.3| unnamed protein product
            [Vitis vinifera]
          Length = 331

 Score =  316 bits (809), Expect = 1e-83
 Identities = 168/300 (56%), Positives = 213/300 (71%), Gaps = 4/300 (1%)
 Frame = -2

Query: 1327 PPTENAAAAHQA--RSYPKAEAECQQLLQNPDVFLQKLRSFHSSFGTKFKIPTLGGKSLN 1154
            P +E A   H +  R YP+A A+ Q+++Q+ D+F Q L+ FH SFGTKF +PT GGK+L+
Sbjct: 24   PQSEAATPTHVSAHRPYPEAAAQYQEVVQSADLFWQTLKDFHRSFGTKFMVPTTGGKALD 83

Query: 1153 LHQLFVEVTSRGGIEKVIRDRRWKEVTGAFKFPSSITSASFVLRKYYLSLLYHFEQVYYF 974
            LH+LFVEVTSRGG+EKVIRDR+WKEVT  FKFP++ITSASFVLRKYYLSLL+H+EQVYYF
Sbjct: 84   LHRLFVEVTSRGGLEKVIRDRKWKEVTTVFKFPTTITSASFVLRKYYLSLLHHYEQVYYF 143

Query: 973  RKEEPSTSVSSADPAN-SVVDGQMGEHSLVDGSALRQCTEIPNLEAGSLVTGTIEAKCDY 797
            RK+  S  +S ADP N S ++G        D +        P L+ G LVTGTI+ K D 
Sbjct: 144  RKQ--SFPISMADPLNSSPINGSATTPVFQDSATTNDLPVSPRLQPGCLVTGTIDGKFDN 201

Query: 796  GYLIAVEFGSQKLNGVLYHIP-AVSQMSQRSNSMSGHAPRRRRSRKMGLNYPSLTKPNKS 620
            GYL++V  GS  L GVLYHIP   S MS+ SN+ +   PR  +  ++ L  PS  K ++S
Sbjct: 202  GYLVSVNLGSDVLKGVLYHIPNNESHMSRSSNASAVPPPRNWKRSQLALRDPSRPKRSQS 261

Query: 619  GYNFFFAEHYTRLKPSHQGQEGAISKKIEVLWSRLSEAEKQVYQLKGQRDN*RHQSEMHE 440
            GYNFFFAE+Y RLKP + GQE AISKKI  LW+RL++AEKQVYQ KG  D  R+++EM E
Sbjct: 262  GYNFFFAENYARLKPLYSGQERAISKKIGFLWNRLTDAEKQVYQEKGMIDKERYKTEMLE 321


>ref|XP_002531766.1| transcription factor, putative [Ricinus communis]
            gi|223528602|gb|EEF30622.1| transcription factor,
            putative [Ricinus communis]
          Length = 313

 Score =  315 bits (807), Expect = 2e-83
 Identities = 166/290 (57%), Positives = 211/290 (72%), Gaps = 1/290 (0%)
 Frame = -2

Query: 1291 RSYPKAEAECQQLLQNPDVFLQKLRSFHSSFGTKFKIPTLGGKSLNLHQLFVEVTSRGGI 1112
            RSYP   A+ + ++Q+ D+F +KL+SFH SFGTKF +PT+GGK+L+LH LFVEVTSRGG+
Sbjct: 28   RSYPSPTAQFEDVVQSSDLFWEKLKSFHKSFGTKFMVPTVGGKALDLHHLFVEVTSRGGL 87

Query: 1111 EKVIRDRRWKEVTGAFKFPSSITSASFVLRKYYLSLLYHFEQVYYFRKEEPSTSVSSADP 932
            EKV+RDR+WKEV  AF FPS+ITSASFVLRKYYLSLLYHFEQVY F K+ PS SVS  D 
Sbjct: 88   EKVVRDRKWKEVIAAFNFPSTITSASFVLRKYYLSLLYHFEQVYQFHKQVPSVSVSD-DV 146

Query: 931  ANSVVDGQMGEHSLVDGSALRQCTEIPNLEAGSLVTGTIEAKCDYGYLIAVEFGSQKLNG 752
              ++V+G     + V+G  + Q      L+ GS V GTI+ K D GYLI V  GS++L G
Sbjct: 147  NGNLVNGS----ATVEGVTVNQFPGSSQLQLGSSVNGTIDGKFDNGYLITVTLGSEQLKG 202

Query: 751  VLYHIPAVSQMSQRSNSMSGHAPRRRRSR-KMGLNYPSLTKPNKSGYNFFFAEHYTRLKP 575
            VLYHIP    MSQ S++ S   PRR R R ++ L  PS  K ++SGYNFFFAEHY +LKP
Sbjct: 203  VLYHIPNEFYMSQSSHN-SDLPPRRHRKRSRLLLRDPSRPKSHRSGYNFFFAEHYAQLKP 261

Query: 574  SHQGQEGAISKKIEVLWSRLSEAEKQVYQLKGQRDN*RHQSEMHECDTSH 425
             H GQE  ISKKI +LW+ L+EAEK++YQ KG +D  R+++EM E  +S+
Sbjct: 262  LHYGQEKVISKKIGLLWNNLTEAEKEIYQEKGLKDKERYKNEMLEYRSSY 311


>ref|XP_002330570.1| high mobility group family [Populus trichocarpa]
            gi|222872128|gb|EEF09259.1| high mobility group family
            [Populus trichocarpa]
          Length = 316

 Score =  309 bits (791), Expect = 1e-81
 Identities = 162/290 (55%), Positives = 206/290 (71%), Gaps = 1/290 (0%)
 Frame = -2

Query: 1291 RSYPKAEAECQQLLQNPDVFLQKLRSFHSSFGTKFKIPTLGGKSLNLHQLFVEVTSRGGI 1112
            RSYP A A+ + + Q+ D+F +KL++FH SFGTKF +PT+GGK+L+LH LFVEVTSRGGI
Sbjct: 29   RSYPPATAKYEDIAQSSDLFWEKLKAFHQSFGTKFMVPTVGGKALDLHHLFVEVTSRGGI 88

Query: 1111 EKVIRDRRWKEVTGAFKFPSSITSASFVLRKYYLSLLYHFEQVYYFRKEEPSTSVSSADP 932
            EKVI DR+WKEV  AF FP++ITSASFVLRK+YLSLLYHFEQVY+F K+ P  S + A  
Sbjct: 89   EKVITDRKWKEVITAFNFPTTITSASFVLRKHYLSLLYHFEQVYHFNKQIPLVSGTDAMN 148

Query: 931  ANSVVDGQMGEHSLVDGSALRQCTEIPNLEAGSLVTGTIEAKCDYGYLIAVEFGSQKLNG 752
              S+V+G     +L +G+   Q +    L+ G  V+G I+ K D GYL+ V  G+ +L G
Sbjct: 149  GRSLVNGSA---TLEEGAITNQFSSSQQLQIGCSVSGIIDGKFDNGYLVTVNLGTNQLKG 205

Query: 751  VLYHIPAVSQMSQRSNSMSGHAPRRRRSR-KMGLNYPSLTKPNKSGYNFFFAEHYTRLKP 575
            VLYHIP     SQ S S S   PRRRR R ++ L  PS  K N+SGYNFFF EHY +LKP
Sbjct: 206  VLYHIPHTFHESQDSRS-SDLPPRRRRKRSRLALRDPSQPKSNRSGYNFFFTEHYAQLKP 264

Query: 574  SHQGQEGAISKKIEVLWSRLSEAEKQVYQLKGQRDN*RHQSEMHECDTSH 425
             H GQE  ISKKI +LW+ L+EAEKQVYQ KG RD  ++++EM E  +S+
Sbjct: 265  LHHGQEKVISKKIGLLWNNLTEAEKQVYQEKGLRDKEKYRNEMLEYRSSY 314


>ref|XP_003592799.1| High mobility group protein B3 [Medicago truncatula]
            gi|355481847|gb|AES63050.1| High mobility group protein
            B3 [Medicago truncatula]
          Length = 417

 Score =  244 bits (623), Expect = 4e-62
 Identities = 137/319 (42%), Positives = 187/319 (58%), Gaps = 26/319 (8%)
 Frame = -2

Query: 1324 PTENAAAAHQARSYPKAEAECQQLLQNPDVFLQKLRSFHSSFGTKFKIPTLGGKSLNLHQ 1145
            P +  A +H    YP   A  ++++ NP +F+  L   H+  GTKF IP +GG+ L+LH+
Sbjct: 13   PMKETALSHG--EYPPPMATYEEVVDNPKLFILCLEKLHTLMGTKFMIPVIGGRELDLHR 70

Query: 1144 LFVEVTSRGGIEKVIRDRRWKEVTGAFKFPSSITSASFVLRKYYLSLLYHFEQVYYFRKE 965
            LFVEVTSRGG EK+I+DR+WKEVT  F FPS+ T+ASFVLRKYY SLLYH+EQ+YYF+  
Sbjct: 71   LFVEVTSRGGFEKIIKDRKWKEVTLVFNFPSTATNASFVLRKYYTSLLYHYEQIYYFKAR 130

Query: 964  EPSTSVSSADPANSVVDGQMGE---------------HSLVDGSALRQCTEIPNLEAGSL 830
            + + + S    + S +     +                 L   SA  +   + +  AGS 
Sbjct: 131  DWTNTTSDVLQSQSSIPAPAPKMQFSHPSPQVQPAVFQQLKVNSAPPEGLSMGSSSAGSQ 190

Query: 829  VTGTIEAKCDYGYLIAVEFGSQKLNGVLYHIP-----AVSQMSQRSN------SMSGHAP 683
            V G I+ K D GYL+ V  GS+KL GVLY  P       S  S  +N      S+  H  
Sbjct: 191  VVGVIDGKFDSGYLVTVTIGSEKLKGVLYQAPQNPVLPASHHSVPANNNNVTASVGVHRR 250

Query: 682  RRRRSRKMGLNYPSLTKPNKSGYNFFFAEHYTRLKPSHQGQEGAISKKIEVLWSRLSEAE 503
            RRR+  +M    P+  KPN+SGYNFFFAE + RLKP H+G++  IS+ I  LW++L E+E
Sbjct: 251  RRRKKSEMKKRDPAHPKPNRSGYNFFFAEQHPRLKPLHRGKDREISRTIGELWNKLPESE 310

Query: 502  KQVYQLKGQRDN*RHQSEM 446
            K VYQ K  +D  R+ +EM
Sbjct: 311  KAVYQDKAVKDKERYITEM 329


>ref|XP_004139006.1| PREDICTED: high mobility group B protein 15-like [Cucumis sativus]
            gi|449530303|ref|XP_004172135.1| PREDICTED: high mobility
            group B protein 15-like [Cucumis sativus]
          Length = 491

 Score =  242 bits (618), Expect = 2e-61
 Identities = 133/309 (43%), Positives = 181/309 (58%), Gaps = 29/309 (9%)
 Frame = -2

Query: 1285 YPKAEAECQQLLQNPDVFLQKLRSFHSSFGTKFKIPTLGGKSLNLHQLFVEVTSRGGIEK 1106
            YP  +   + ++ N  +F+  L   HS  GTKF IP +GGK L+LH+LFVEVTSRGGIEK
Sbjct: 24   YPPPQTTYEDIIANSKIFMTALEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEK 83

Query: 1105 VIRDRRWKEVTGAFKFPSSITSASFVLRKYYLSLLYHFEQVYYFRKE--EPSTSVSSADP 932
            VIR+RRWKEVT  F FPS+ T+ASFVLRKYY+SLL+HFEQ+Y+F+     P TS SS  P
Sbjct: 84   VIRERRWKEVTSVFNFPSTATNASFVLRKYYISLLHHFEQIYFFKAVGWTPVTSDSSPCP 143

Query: 931  ANSVVDGQ-------MGEHSLVDGSALRQCTEIPNLEAGSL-------VTGTIEAKCDYG 794
            + S +  Q         ++           TE+P +   S        V G I+ K D G
Sbjct: 144  SASAIPTQGVTSMLPPSDNQAASHQPQSTATELPAVSPSSTSPVGGFPVIGVIDGKFDSG 203

Query: 793  YLIAVEFGSQKLNGVLYHIP-------------AVSQMSQRSNSMSGHAPRRRRSRKMGL 653
            YL+ V  G++KL GVLY  P             A ++      + + H  RRR+  ++  
Sbjct: 204  YLVTVTVGTEKLKGVLYQAPEQPSQPQVLQPVGAFAKDGSTPTTPNAHRRRRRKKSEIKR 263

Query: 652  NYPSLTKPNKSGYNFFFAEHYTRLKPSHQGQEGAISKKIEVLWSRLSEAEKQVYQLKGQR 473
              P+  KPN+SGYNFFFAE + RLKP + G++  IS+ I  LW++L E+E+ VYQ K  +
Sbjct: 264  RDPAHPKPNRSGYNFFFAEQHARLKPLYPGKDREISRMIGDLWNKLKESERTVYQEKAMK 323

Query: 472  DN*RHQSEM 446
            D  R++ EM
Sbjct: 324  DKERYRIEM 332


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