BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00022835
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD17351.1| contains similarity to retrovirus-related polypro...   223   1e-56
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]              218   5e-55
gb|AAM94350.1| gag-pol polyprotein [Zea mays]                         214   4e-54
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja...   214   8e-54
dbj|BAH80072.1| putative unclassified retrotransposon protein [O...   214   8e-54

>gb|AAD17351.1| contains similarity to retrovirus-related polyproteins and to CCHC
           zinc finger protein (Pfam: PF00098, Score=16.3, E=0.051,
           E= 1) [Arabidopsis thaliana] gi|7267432|emb|CAB77944.1|
           putative polyprotein [Arabidopsis thaliana]
          Length = 1138

 Score =  223 bits (568), Expect = 1e-56
 Identities = 104/129 (80%), Positives = 116/129 (89%)
 Frame = -1

Query: 395 APVLTLLDFSKIFEIECDASGVGIGAVLKQEGKSVAYFSEKLGGATLNYPTYDKEFYSVV 216
           APVL+L DF K FEIECDA GVGIGAVL Q+ K +AYFSEKLGGATLNYPTYDKE Y++V
Sbjct: 613 APVLSLPDFLKTFEIECDAPGVGIGAVLMQDKKPIAYFSEKLGGATLNYPTYDKELYALV 672

Query: 215 RAIETWQHYLMPKEFVIHTDHESLKHLRGQGKLNKRHAKWVSFIESFPYVIKYK*GKDNI 36
           RA++TWQHYL PKEFVIHTDHESLKHL+GQ KLNKRHA+WV FIE+FPYVIKYK GKDN+
Sbjct: 673 RALQTWQHYLWPKEFVIHTDHESLKHLKGQQKLNKRHARWVEFIETFPYVIKYKKGKDNV 732

Query: 35  VTDALSKRH 9
           V DALS+RH
Sbjct: 733 VADALSRRH 741


>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
          Length = 1887

 Score =  218 bits (554), Expect = 5e-55
 Identities = 103/131 (78%), Positives = 116/131 (88%)
 Frame = -1

Query: 395  APVLTLLDFSKIFEIECDASGVGIGAVLKQEGKSVAYFSEKLGGATLNYPTYDKEFYSVV 216
            APVL+L DF K FEIECDASGVGIG VL Q+ K +AYFSEKLGGATLNYPTYDKE Y++V
Sbjct: 1194 APVLSLPDFLKTFEIECDASGVGIGVVLMQDKKPIAYFSEKLGGATLNYPTYDKELYALV 1253

Query: 215  RAIETWQHYLMPKEFVIHTDHESLKHLRGQGKLNKRHAKWVSFIESFPYVIKYK*GKDNI 36
            RA++T QHYL PKEFVIHTDHESLKHL+GQ KLNKRHA+WV FIE+FPYVIKYK GKDN+
Sbjct: 1254 RALQTGQHYLWPKEFVIHTDHESLKHLKGQQKLNKRHARWVEFIETFPYVIKYKKGKDNV 1313

Query: 35   VTDALSKRHTL 3
            V DALS+R+ L
Sbjct: 1314 VADALSRRYVL 1324


>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
          Length = 1618

 Score =  214 bits (546), Expect = 4e-54
 Identities = 98/131 (74%), Positives = 115/131 (87%)
 Frame = -1

Query: 395  APVLTLLDFSKIFEIECDASGVGIGAVLKQEGKSVAYFSEKLGGATLNYPTYDKEFYSVV 216
            AP+L L DF+K FE+ECDASG+G+G VL QEGK VAYFSEKL G+ LNY TYDKE Y++V
Sbjct: 1005 APLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGSVLNYSTYDKELYALV 1064

Query: 215  RAIETWQHYLMPKEFVIHTDHESLKHLRGQGKLNKRHAKWVSFIESFPYVIKYK*GKDNI 36
            R +ETWQHYL PKEFVIH+DHESLKH+R QGKLN+RHAKWV FIESFPYVIK+K GK+NI
Sbjct: 1065 RTLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESFPYVIKHKKGKENI 1124

Query: 35   VTDALSKRHTL 3
            + DALS+R+TL
Sbjct: 1125 IADALSRRYTL 1135


>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
            gi|31431012|gb|AAP52850.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 2447

 Score =  214 bits (544), Expect = 8e-54
 Identities = 98/131 (74%), Positives = 114/131 (87%)
 Frame = -1

Query: 395  APVLTLLDFSKIFEIECDASGVGIGAVLKQEGKSVAYFSEKLGGATLNYPTYDKEFYSVV 216
            AP+L L DF+K FE+ECDASG+G+G VL QEGK VAYFSEKL G  LNY TYDKE Y++V
Sbjct: 1002 APLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGPVLNYSTYDKELYALV 1061

Query: 215  RAIETWQHYLMPKEFVIHTDHESLKHLRGQGKLNKRHAKWVSFIESFPYVIKYK*GKDNI 36
            R +ETWQHYL PKEFVIH+DHESLKH+R QGKLN+RHAKWV FIESFPYVIK+K GK+NI
Sbjct: 1062 RTLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESFPYVIKHKKGKENI 1121

Query: 35   VTDALSKRHTL 3
            + DALS+R+TL
Sbjct: 1122 IADALSRRYTL 1132



 Score =  114 bits (285), Expect = 8e-24
 Identities = 59/128 (46%), Positives = 80/128 (62%)
 Frame = -1

Query: 395  APVLTLLDFSKIFEIECDASGVGIGAVLKQEGKSVAYFSEKLGGATLNYPTYDKEFYSVV 216
            +PVL L D  K F + CDAS  G+G VL QEG  VAY S +L     NYPT+D E  +VV
Sbjct: 1794 SPVLILPDTRKDFMVYCDASPQGLGCVLMQEGHVVAYASRQLWPHEGNYPTHDLELAAVV 1853

Query: 215  RAIETWQHYLMPKEFVIHTDHESLKHLRGQGKLNKRHAKWVSFIESFPYVIKYK*GKDNI 36
             A++ W+HYL+     I+TDH+SLK++  Q  LN R  +W+  I+ +   I Y  GK N+
Sbjct: 1854 HALKIWRHYLIGNRCEIYTDHKSLKYIFTQSDLNLRQRRWLELIKDYDVGIHYHPGKANV 1913

Query: 35   VTDALSKR 12
            V DALS++
Sbjct: 1914 VADALSRK 1921


>dbj|BAH80072.1| putative unclassified retrotransposon protein [Oryza sativa Indica
           Group]
          Length = 848

 Score =  214 bits (544), Expect = 8e-54
 Identities = 98/131 (74%), Positives = 114/131 (87%)
 Frame = -1

Query: 395 APVLTLLDFSKIFEIECDASGVGIGAVLKQEGKSVAYFSEKLGGATLNYPTYDKEFYSVV 216
           AP+L L DF+K FE+ECDASG+G+G VL QEGK VAYFSEKL G  LNY TYDKE Y++V
Sbjct: 366 APLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGPVLNYSTYDKELYALV 425

Query: 215 RAIETWQHYLMPKEFVIHTDHESLKHLRGQGKLNKRHAKWVSFIESFPYVIKYK*GKDNI 36
           R +ETWQHYL PKEFVIH+DHESLKH+R QGKLN+RHAKWV FIESFPYVIK+K GK+NI
Sbjct: 426 RTLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESFPYVIKHKKGKENI 485

Query: 35  VTDALSKRHTL 3
           + DALS+R+TL
Sbjct: 486 IADALSRRYTL 496