BLASTX nr result
ID: Cephaelis21_contig00022828
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00022828
(1077 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P30155.1|RK27_TOBAC RecName: Full=50S ribosomal protein L27, ... 133 7e-29
ref|XP_002270270.1| PREDICTED: 50S ribosomal protein L27, chloro... 131 3e-28
emb|CAN67770.1| hypothetical protein VITISV_010521 [Vitis vinifera] 131 3e-28
ref|NP_198911.1| 50S ribosomal protein L27 [Arabidopsis thaliana... 129 2e-27
ref|XP_002870663.1| hypothetical protein ARALYDRAFT_493880 [Arab... 127 4e-27
>sp|P30155.1|RK27_TOBAC RecName: Full=50S ribosomal protein L27, chloroplastic; AltName:
Full=CL27; Flags: Precursor gi|170306|gb|AAA34104.1|
ribosomal protein L27 [Nicotiana tabacum]
gi|170326|gb|AAA34115.1| ribosomal protein L27
[Nicotiana tabacum]
Length = 179
Score = 133 bits (335), Expect = 7e-29
Identities = 76/97 (78%), Positives = 83/97 (85%), Gaps = 1/97 (1%)
Frame = -2
Query: 908 VSFNLVGALRGLSVAPSSSSTFLTGDFGAV-PGVQHLSVSFPPLKSPSPLTIESAHKKGA 732
VSF+LVGA +GLS+A SSS+FL GDFGA P SVSFP LKSP LTIESAHKKGA
Sbjct: 3 VSFSLVGAFKGLSLA--SSSSFLKGDFGAAFPVAPKFSVSFP-LKSP--LTIESAHKKGA 57
Query: 731 GNTKNGRDSPGQRLGVKIYGDQVAKPGAIIVRQRGTK 621
G+TKNGRDSPGQRLGVKI+GDQVAKPG+IIVRQRGTK
Sbjct: 58 GSTKNGRDSPGQRLGVKIFGDQVAKPGSIIVRQRGTK 94
Score = 60.8 bits (146), Expect = 5e-07
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = -2
Query: 86 QFHPGKNVGLGKDHTIFSLIDGLVKFEK 3
+FHPGKNVGLGKDHTIFSLIDGLVKFEK
Sbjct: 94 KFHPGKNVGLGKDHTIFSLIDGLVKFEK 121
>ref|XP_002270270.1| PREDICTED: 50S ribosomal protein L27, chloroplastic [Vitis
vinifera] gi|296082339|emb|CBI21344.3| unnamed protein
product [Vitis vinifera]
Length = 186
Score = 131 bits (329), Expect = 3e-28
Identities = 73/95 (76%), Positives = 80/95 (84%)
Frame = -2
Query: 905 SFNLVGALRGLSVAPSSSSTFLTGDFGAVPGVQHLSVSFPPLKSPSPLTIESAHKKGAGN 726
S NLVGA +GLS+ SS+S+FL GD G++ G L VSFP LKS PLTIESAHKKGAG+
Sbjct: 3 SLNLVGAFKGLSL--SSTSSFLRGDLGSITGSSKLCVSFP-LKS-LPLTIESAHKKGAGS 58
Query: 725 TKNGRDSPGQRLGVKIYGDQVAKPGAIIVRQRGTK 621
TKNGRDS GQRLGVKIYGDQVAKPGAIIVRQRGTK
Sbjct: 59 TKNGRDSRGQRLGVKIYGDQVAKPGAIIVRQRGTK 93
Score = 60.8 bits (146), Expect = 5e-07
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = -2
Query: 86 QFHPGKNVGLGKDHTIFSLIDGLVKFEK 3
+FHPGKNVGLGKDHTIFSLIDGLVKFEK
Sbjct: 93 KFHPGKNVGLGKDHTIFSLIDGLVKFEK 120
>emb|CAN67770.1| hypothetical protein VITISV_010521 [Vitis vinifera]
Length = 186
Score = 131 bits (329), Expect = 3e-28
Identities = 73/95 (76%), Positives = 80/95 (84%)
Frame = -2
Query: 905 SFNLVGALRGLSVAPSSSSTFLTGDFGAVPGVQHLSVSFPPLKSPSPLTIESAHKKGAGN 726
S NLVGA +GLS+ SS+S+FL GD G++ G L VSFP LKS PLTIESAHKKGAG+
Sbjct: 3 SLNLVGAFKGLSL--SSTSSFLRGDLGSITGSSKLCVSFP-LKS-LPLTIESAHKKGAGS 58
Query: 725 TKNGRDSPGQRLGVKIYGDQVAKPGAIIVRQRGTK 621
TKNGRDS GQRLGVKIYGDQVAKPGAIIVRQRGTK
Sbjct: 59 TKNGRDSRGQRLGVKIYGDQVAKPGAIIVRQRGTK 93
Score = 60.8 bits (146), Expect = 5e-07
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = -2
Query: 86 QFHPGKNVGLGKDHTIFSLIDGLVKFEK 3
+FHPGKNVGLGKDHTIFSLIDGLVKFEK
Sbjct: 93 KFHPGKNVGLGKDHTIFSLIDGLVKFEK 120
>ref|NP_198911.1| 50S ribosomal protein L27 [Arabidopsis thaliana]
gi|20139726|sp|Q9FLN4.1|RK27_ARATH RecName: Full=50S
ribosomal protein L27, chloroplastic; AltName:
Full=CL27; Flags: Precursor gi|189096146|pdb|3BBO|X
Chain X, Homology Model For The Spinach Chloroplast 50s
Subunit Fitted To 9.4a Cryo-Em Map Of The 70s
Chlororibosome gi|9759141|dbj|BAB09697.1| 50S ribosomal
protein L27 [Arabidopsis thaliana]
gi|15028249|gb|AAK76713.1| putative 50S ribosomal
protein L27 [Arabidopsis thaliana]
gi|21436345|gb|AAM51342.1| putative 50S ribosomal
protein L27 [Arabidopsis thaliana]
gi|332007235|gb|AED94618.1| 50S ribosomal protein L27
[Arabidopsis thaliana]
Length = 198
Score = 129 bits (323), Expect = 2e-27
Identities = 68/101 (67%), Positives = 81/101 (80%), Gaps = 1/101 (0%)
Frame = -2
Query: 920 MAATVSFNLVGALRGLSVAPSSSSTFLTGDFGAVPGVQH-LSVSFPPLKSPSPLTIESAH 744
MA ++S NL+GA +GLS+ SS+S+FL GD P +++ L++P PLTIESAH
Sbjct: 3 MATSMSLNLIGAFKGLSL--SSTSSFLRGDLSFSPKTSFTVTLPLENLQAPIPLTIESAH 60
Query: 743 KKGAGNTKNGRDSPGQRLGVKIYGDQVAKPGAIIVRQRGTK 621
KKGAG+TKNGRDSPGQRLGVKIYGDQVAKPGAIIVRQRGTK
Sbjct: 61 KKGAGSTKNGRDSPGQRLGVKIYGDQVAKPGAIIVRQRGTK 101
Score = 57.0 bits (136), Expect = 8e-06
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = -2
Query: 86 QFHPGKNVGLGKDHTIFSLIDGLVKFEK 3
+FH GKNVG+GKDHTIFSLIDGLVKFEK
Sbjct: 101 KFHAGKNVGIGKDHTIFSLIDGLVKFEK 128
>ref|XP_002870663.1| hypothetical protein ARALYDRAFT_493880 [Arabidopsis lyrata subsp.
lyrata] gi|297316499|gb|EFH46922.1| hypothetical protein
ARALYDRAFT_493880 [Arabidopsis lyrata subsp. lyrata]
Length = 198
Score = 127 bits (320), Expect = 4e-27
Identities = 68/101 (67%), Positives = 81/101 (80%), Gaps = 1/101 (0%)
Frame = -2
Query: 920 MAATVSFNLVGALRGLSVAPSSSSTFLTGDFGAVPGVQH-LSVSFPPLKSPSPLTIESAH 744
MA +++ NLVGA +GLS+ SS+S+FL GD P +++ L++P PLTIESAH
Sbjct: 3 MATSMTLNLVGAFKGLSL--SSTSSFLRGDLNFSPKTTFTVTLPLENLQAPIPLTIESAH 60
Query: 743 KKGAGNTKNGRDSPGQRLGVKIYGDQVAKPGAIIVRQRGTK 621
KKGAG+TKNGRDSPGQRLGVKIYGDQVAKPGAIIVRQRGTK
Sbjct: 61 KKGAGSTKNGRDSPGQRLGVKIYGDQVAKPGAIIVRQRGTK 101
Score = 57.0 bits (136), Expect = 8e-06
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = -2
Query: 86 QFHPGKNVGLGKDHTIFSLIDGLVKFEK 3
+FH GKNVG+GKDHTIFSLIDGLVKFEK
Sbjct: 101 KFHAGKNVGIGKDHTIFSLIDGLVKFEK 128