BLASTX nr result

ID: Cephaelis21_contig00022734 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00022734
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316840.1| glutamate-gated kainate-type ion channel rec...   119   3e-25
ref|XP_003593704.1| Glutamate receptor 2.7 [Medicago truncatula]...   117   8e-25
ref|XP_003593708.1| Glutamate-gated kainate-type ion channel rec...   117   1e-24
ref|XP_002305092.1| glutamate-gated kainate-type ion channel rec...   117   1e-24
ref|XP_003541715.1| PREDICTED: glutamate receptor 2.7-like [Glyc...   113   2e-23

>ref|XP_002316840.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222859905|gb|EEE97452.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 838

 Score =  119 bits (298), Expect = 3e-25
 Identities = 58/115 (50%), Positives = 85/115 (73%)
 Frame = -3

Query: 345 LLLFFVMIICLSSVTGAKNETINIGAIIDVHSRVGKEQQIAMKMAVQSFNNISANHRLVL 166
           L+ F +++          N+  NIGAIID +SR GKE++ AM++AVQ+FNNIS NH+L L
Sbjct: 35  LITFLLILSDGVEAAAGTNKVTNIGAIIDGNSRSGKEEKTAMEIAVQNFNNISRNHKLSL 94

Query: 165 HFQDIGNNPIQAVSAAEELIREQQVQVIIGLQTWEQSVLVADVGKRAQVPVLSLA 1
           HF+    +P+QA  AAEELI+E++V+VIIG+  WE++ LVA++G ++QVP+LS A
Sbjct: 95  HFKHPKGDPLQAAYAAEELIKEKKVEVIIGMDKWEEAALVANIGNQSQVPILSFA 149


>ref|XP_003593704.1| Glutamate receptor 2.7 [Medicago truncatula]
           gi|355482752|gb|AES63955.1| Glutamate receptor 2.7
           [Medicago truncatula]
          Length = 1083

 Score =  117 bits (294), Expect = 8e-25
 Identities = 56/118 (47%), Positives = 88/118 (74%), Gaps = 7/118 (5%)
 Frame = -3

Query: 339 LFFVMIICLSSVTGAKNETIN-------IGAIIDVHSRVGKEQQIAMKMAVQSFNNISAN 181
           LFFV+++  + + G ++ET+N       IG IID  SR+GKEQ++AM +A QS+NN S N
Sbjct: 16  LFFVLLVPFALIYGIRDETMNSDNKVISIGVIIDGDSRIGKEQEVAMDIAAQSYNNTSKN 75

Query: 180 HRLVLHFQDIGNNPIQAVSAAEELIREQQVQVIIGLQTWEQSVLVADVGKRAQVPVLS 7
           ++L L+F++   + ++A+  AEE+I  Q+VQVIIG+QTW+++ +VA+VG +AQVPV+S
Sbjct: 76  YKLALYFKNSTKDTLKAIKIAEEMINVQKVQVIIGMQTWQEAAMVAEVGSKAQVPVIS 133



 Score =  102 bits (253), Expect = 4e-20
 Identities = 46/97 (47%), Positives = 77/97 (79%)
 Frame = -3

Query: 291  NETINIGAIIDVHSRVGKEQQIAMKMAVQSFNNISANHRLVLHFQDIGNNPIQAVSAAEE 112
            ++ I+IG I+DV+SR+GKEQ++A ++A QS++N S N++LVL+FQ+   + ++A+  AEE
Sbjct: 942  SKVISIGVIVDVNSRIGKEQELA-EIASQSYSNTSKNYKLVLYFQNSTKDTLKAIKIAEE 1000

Query: 111  LIREQQVQVIIGLQTWEQSVLVADVGKRAQVPVLSLA 1
            +I  Q+VQVIIG+ TW ++ ++ D+G +AQVP++S A
Sbjct: 1001 MINVQKVQVIIGMHTWPEAAIMEDIGSKAQVPIISFA 1037


>ref|XP_003593708.1| Glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Medicago truncatula] gi|355482756|gb|AES63959.1|
           Glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Medicago truncatula]
          Length = 635

 Score =  117 bits (292), Expect = 1e-24
 Identities = 55/118 (46%), Positives = 85/118 (72%), Gaps = 3/118 (2%)
 Frame = -3

Query: 345 LLLFFVMIICL---SSVTGAKNETINIGAIIDVHSRVGKEQQIAMKMAVQSFNNISANHR 175
           LLL+  +II L     +  +   T ++G IIDV+S +GK Q+ AM++A QSFNN S NH 
Sbjct: 15  LLLWLPLIISLLLFQCLANSSQTTTSVGVIIDVNSEIGKNQKTAMQIAAQSFNNYSNNHN 74

Query: 174 LVLHFQDIGNNPIQAVSAAEELIREQQVQVIIGLQTWEQSVLVADVGKRAQVPVLSLA 1
           ++L F+D G NP+QA SAAE+LI +++V+VIIG++TW+++ +VAD G + Q+P +S +
Sbjct: 75  IILFFRDSGKNPLQAASAAEDLITKEKVKVIIGMETWQEAAIVADFGAKFQIPTISFS 132


>ref|XP_002305092.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222848056|gb|EEE85603.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 942

 Score =  117 bits (292), Expect = 1e-24
 Identities = 53/93 (56%), Positives = 76/93 (81%)
 Frame = -3

Query: 279 NIGAIIDVHSRVGKEQQIAMKMAVQSFNNISANHRLVLHFQDIGNNPIQAVSAAEELIRE 100
           NIGAIIDV+SR+GKE++ A+++AVQ FN+IS NH L LHF+  G +P+Q   AAEELI+E
Sbjct: 57  NIGAIIDVNSRIGKEEKTALELAVQDFNDISTNHELSLHFRHPGEDPLQVAYAAEELIKE 116

Query: 99  QQVQVIIGLQTWEQSVLVADVGKRAQVPVLSLA 1
           ++V+VIIG+  WE++ LVA++G + Q+P+LS A
Sbjct: 117 KKVKVIIGMDNWEEAALVANIGNQYQIPILSFA 149


>ref|XP_003541715.1| PREDICTED: glutamate receptor 2.7-like [Glycine max]
          Length = 910

 Score =  113 bits (282), Expect = 2e-23
 Identities = 52/122 (42%), Positives = 89/122 (72%), Gaps = 7/122 (5%)
 Frame = -3

Query: 345 LLLFFVMIICLSSVTG-------AKNETINIGAIIDVHSRVGKEQQIAMKMAVQSFNNIS 187
           ++  F ++I L  ++G       A N+ I+IGAIIDV+SR+GKEQQ+A+ +A QS+N+ S
Sbjct: 1   MIWLFYLLISLGLISGYQNEATNANNKVISIGAIIDVNSRIGKEQQVALDIAAQSYNSTS 60

Query: 186 ANHRLVLHFQDIGNNPIQAVSAAEELIREQQVQVIIGLQTWEQSVLVADVGKRAQVPVLS 7
             ++L L+F++   +P++A++  EE+I +Q+VQVIIG+  W ++ LVA++G +AQVP+++
Sbjct: 61  RTYKLALYFRNSTKDPLRAITLVEEMIYKQKVQVIIGMHKWSEAALVAEIGSQAQVPIIA 120

Query: 6   LA 1
            A
Sbjct: 121 FA 122


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