BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00022607
         (1081 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268516.1| PREDICTED: pentatricopeptide repeat-containi...   368   1e-99
ref|XP_002533784.1| pentatricopeptide repeat-containing protein,...   353   4e-95
ref|XP_004135752.1| PREDICTED: pentatricopeptide repeat-containi...   353   5e-95
ref|XP_003539000.1| PREDICTED: pentatricopeptide repeat-containi...   351   2e-94
ref|NP_174349.1| pentatricopeptide repeat-containing protein [Ar...   343   6e-92

>ref|XP_002268516.1| PREDICTED: pentatricopeptide repeat-containing protein At1g30610,
            chloroplastic-like [Vitis vinifera]
          Length = 846

 Score =  368 bits (945), Expect = 1e-99
 Identities = 200/359 (55%), Positives = 250/359 (69%), Gaps = 18/359 (5%)
 Frame = +3

Query: 54   RSQKDGKNDKFMYSRARSSGGFLMKEGRDIG-------------GLSRPKDGENDKLSDW 194
            +  K GK D+   +    S   L+++  D+G             G    K   +DKL   
Sbjct: 137  KKSKFGKQDELYKNSGGRSARGLVQDELDLGWKNDDENSSEIWEGKGSSKSQRDDKL--- 193

Query: 195  EGEIY----SGVVTKGEGK-NDVFGLVIAGNKMVTDNKITGKEKVRKFTKKSIIDEDING 359
            +G  +    SG+ +KG  K +++ G  +   K V D KI  K+     ++K  +++   G
Sbjct: 194  KGRAFKADSSGLGSKGMRKRHEMNGAQV---KKVGDEKIGIKKGNFNKSRKGFLEK--GG 248

Query: 360  REVLDMERDAFKPSKELEDVYARPRISRAEMEERIQKLAKCLNGADIDMPEWMFTKMMRS 539
             ++L++ER AFK  +   D+  +  +S+ EMEERIQKLAK LNGADIDMPEWMF+KMMRS
Sbjct: 249  DDILEIERAAFKNFEAFNDITVKKPVSKMEMEERIQKLAKLLNGADIDMPEWMFSKMMRS 308

Query: 540  GQIRFSDYSMLRLIQILGKLGNWRRVLQVIEWIQLRERFKSHKLRHIYTSALDALGKSRR 719
             +IRF+D+S+LR+IQILGKLGNWRR LQV+EW+QLRERFKSHKLR+IYT+ALD LGK+RR
Sbjct: 309  AKIRFTDHSILRVIQILGKLGNWRRALQVLEWLQLRERFKSHKLRYIYTAALDVLGKARR 368

Query: 720  PVEALNLFNSMQKHMSSYPDIVAYRSIAVTLGQSGHMKELFYVIDTMRSPPKKKLKTGVL 899
            PVEALN+F +M + MSSYPD+VAY  IAVTLGQ+GHMKELF VID MRSPP+KK KTG L
Sbjct: 369  PVEALNVFYAMLQQMSSYPDLVAYHCIAVTLGQAGHMKELFDVIDCMRSPPRKKFKTGAL 428

Query: 900  EKWDPRLEPDIVVYNAVLNACVQRKKWEGAFWVXXXXXXXXXXPPTTTYGLVMEVMLAC 1076
            EKWDPRLEPDIVVYNAVLNACV+RK+WEGAFWV          P  TTYGLVMEVM  C
Sbjct: 429  EKWDPRLEPDIVVYNAVLNACVRRKQWEGAFWVLQQLKQQSQKPSITTYGLVMEVMFVC 487


>ref|XP_002533784.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223526285|gb|EEF28597.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 856

 Score =  353 bits (906), Expect = 4e-95
 Identities = 170/265 (64%), Positives = 214/265 (80%)
 Frame = +3

Query: 282  TDNKITGKEKVRKFTKKSIIDEDINGREVLDMERDAFKPSKELEDVYARPRISRAEMEER 461
            TD +   K+ + + T ++ +D      +  ++ER AFK  +E  +   RP+ S+ E+E+R
Sbjct: 242  TDKEFMEKKGLIRRTNQAFLD--YGHEDDSEVERAAFKSLEEYNNFTGRPQNSKREVEDR 299

Query: 462  IQKLAKCLNGADIDMPEWMFTKMMRSGQIRFSDYSMLRLIQILGKLGNWRRVLQVIEWIQ 641
            +QKLAKCLNGADIDMPEWMF+KMMRS +I+++D+S+LR+IQILGKLGNWRRVLQVIEW+Q
Sbjct: 300  LQKLAKCLNGADIDMPEWMFSKMMRSARIKYTDHSVLRIIQILGKLGNWRRVLQVIEWLQ 359

Query: 642  LRERFKSHKLRHIYTSALDALGKSRRPVEALNLFNSMQKHMSSYPDIVAYRSIAVTLGQS 821
            +RERFKSH+LR+IYT+AL+ LGK++RPVEALN+F+ MQ+ MSSYPD+VAY  IAVTLGQ+
Sbjct: 360  MRERFKSHRLRNIYTTALNVLGKAQRPVEALNVFHVMQQQMSSYPDLVAYHCIAVTLGQA 419

Query: 822  GHMKELFYVIDTMRSPPKKKLKTGVLEKWDPRLEPDIVVYNAVLNACVQRKKWEGAFWVX 1001
            GHM++LF VID+MRSPPKKK K   + KWDPRLEPDIVVYNAVLNACVQRK+WEGAFWV 
Sbjct: 420  GHMEQLFDVIDSMRSPPKKKFKMAAVHKWDPRLEPDIVVYNAVLNACVQRKQWEGAFWVL 479

Query: 1002 XXXXXXXXXPPTTTYGLVMEVMLAC 1076
                     P TTTYGL+MEVM AC
Sbjct: 480  QQLKQQGLQPSTTTYGLIMEVMFAC 504


>ref|XP_004135752.1| PREDICTED: pentatricopeptide repeat-containing protein At1g30610,
            chloroplastic-like [Cucumis sativus]
          Length = 902

 Score =  353 bits (905), Expect = 5e-95
 Identities = 184/313 (58%), Positives = 232/313 (74%), Gaps = 5/313 (1%)
 Frame = +3

Query: 153  SRPKDGENDKLSD--WEGEIYSGVVTKGEGKNDVFGLVIAGNKMVTDNKITGKEKVRKFT 326
            SR  DG + K S+  W          KG  K   +G+ +  +    D K+  K+  + + 
Sbjct: 249  SRVSDGNSMKTSEKIWAWGDDDAKPAKGVLKAGKYGIQLERSYNPGD-KVGRKKTEQSYR 307

Query: 327  KKSIIDE---DINGREVLDMERDAFKPSKELEDVYARPRISRAEMEERIQKLAKCLNGAD 497
              S   +   + N +  L++E  AF  + +  D+  +PR+S+ EMEERIQ L+K LNGAD
Sbjct: 308  GTSTSGKRFLEFNEKNSLEVEHAAFN-NFDAFDIMDKPRVSKMEMEERIQMLSKRLNGAD 366

Query: 498  IDMPEWMFTKMMRSGQIRFSDYSMLRLIQILGKLGNWRRVLQVIEWIQLRERFKSHKLRH 677
            IDMPEWMF++MMRS +IR+SD+S+LR+IQ+LGKLGNWRRVLQ+IEW+Q+RERFKSHKLR 
Sbjct: 367  IDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQIIEWLQMRERFKSHKLRF 426

Query: 678  IYTSALDALGKSRRPVEALNLFNSMQKHMSSYPDIVAYRSIAVTLGQSGHMKELFYVIDT 857
            IYT+ALD LGK+RRPVEALN+F++MQ+H SSYPD+VAY SIAVTLGQ+G+M+ELF VID+
Sbjct: 427  IYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAGYMRELFDVIDS 486

Query: 858  MRSPPKKKLKTGVLEKWDPRLEPDIVVYNAVLNACVQRKKWEGAFWVXXXXXXXXXXPPT 1037
            MRSPPKKK KTGVLEKWDPRL+PDIV+YNAVLNACV+RK  EGAFWV          P T
Sbjct: 487  MRSPPKKKFKTGVLEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVLQELKKQSLQPST 546

Query: 1038 TTYGLVMEVMLAC 1076
            +TYGLVMEVML C
Sbjct: 547  STYGLVMEVMLEC 559


>ref|XP_003539000.1| PREDICTED: pentatricopeptide repeat-containing protein At1g30610,
            chloroplastic-like [Glycine max]
          Length = 893

 Score =  351 bits (900), Expect = 2e-94
 Identities = 171/259 (66%), Positives = 209/259 (80%)
 Frame = +3

Query: 300  GKEKVRKFTKKSIIDEDINGREVLDMERDAFKPSKELEDVYARPRISRAEMEERIQKLAK 479
            G    R  ++K  ID   +  + L++ER AF+  ++  +V  + + S  EMEE+IQKLA 
Sbjct: 292  GSLAYRNGSRKRFIDRGYDS-DNLEVERAAFENLEDPNNVIRKSQFSHKEMEEKIQKLAN 350

Query: 480  CLNGADIDMPEWMFTKMMRSGQIRFSDYSMLRLIQILGKLGNWRRVLQVIEWIQLRERFK 659
             LNGADI++PEWMF+KM+RS +++F+DY++ R+I ILGKLGNWRRV+QVIEW+Q RERFK
Sbjct: 351  SLNGADINLPEWMFSKMIRSARLKFNDYAITRIIIILGKLGNWRRVIQVIEWLQKRERFK 410

Query: 660  SHKLRHIYTSALDALGKSRRPVEALNLFNSMQKHMSSYPDIVAYRSIAVTLGQSGHMKEL 839
            SHKLRHIYT+ALDALGKSRRPVEALN+F++MQ+ MSSYPD+VAY SIAVTLGQ+GHMKEL
Sbjct: 411  SHKLRHIYTAALDALGKSRRPVEALNIFHAMQQQMSSYPDLVAYHSIAVTLGQAGHMKEL 470

Query: 840  FYVIDTMRSPPKKKLKTGVLEKWDPRLEPDIVVYNAVLNACVQRKKWEGAFWVXXXXXXX 1019
            F VID MRSPPKKK KTG+ E WDPRLEPDIVVY+AVLNACV+RK+WEGAFWV       
Sbjct: 471  FDVIDIMRSPPKKKFKTGIFENWDPRLEPDIVVYHAVLNACVRRKQWEGAFWVLQQLKKQ 530

Query: 1020 XXXPPTTTYGLVMEVMLAC 1076
               P  TTYGLVMEVML+C
Sbjct: 531  GQPPSATTYGLVMEVMLSC 549


>ref|NP_174349.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75200328|sp|Q9SA76.1|PPR64_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At1g30610, chloroplastic; AltName: Full=Protein EMBRYO
            DEFECTIVE 2279; Flags: Precursor
            gi|4587517|gb|AAD25748.1|AC007060_6 T5I8.6 [Arabidopsis
            thaliana] gi|332193128|gb|AEE31249.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 1006

 Score =  343 bits (879), Expect = 6e-92
 Identities = 168/267 (62%), Positives = 210/267 (78%)
 Frame = +3

Query: 279  VTDNKITGKEKVRKFTKKSIIDEDINGREVLDMERDAFKPSKELEDVYARPRISRAEMEE 458
            +  +K++G  ++    K++  D+D     +  ME  AF+ S E  D+  +P  SR EME+
Sbjct: 382  IRSSKLSGTRRIG--AKRNDDDDD----SLFAMETPAFRFSDESSDIVDKPATSRVEMED 435

Query: 459  RIQKLAKCLNGADIDMPEWMFTKMMRSGQIRFSDYSMLRLIQILGKLGNWRRVLQVIEWI 638
            RI+KLAK LNGADI+MPEW F+K +RS +IR++DY+++RLI  LGKLGNWRRVLQVIEW+
Sbjct: 436  RIEKLAKVLNGADINMPEWQFSKAIRSAKIRYTDYTVMRLIHFLGKLGNWRRVLQVIEWL 495

Query: 639  QLRERFKSHKLRHIYTSALDALGKSRRPVEALNLFNSMQKHMSSYPDIVAYRSIAVTLGQ 818
            Q ++R+KS+K+R IYT+AL+ LGKSRRPVEALN+F++M   +SSYPD+VAYRSIAVTLGQ
Sbjct: 496  QRQDRYKSNKIRIIYTTALNVLGKSRRPVEALNVFHAMLLQISSYPDMVAYRSIAVTLGQ 555

Query: 819  SGHMKELFYVIDTMRSPPKKKLKTGVLEKWDPRLEPDIVVYNAVLNACVQRKKWEGAFWV 998
            +GH+KELFYVIDTMRSPPKKK K   LEKWDPRLEPD+VVYNAVLNACVQRK+WEGAFWV
Sbjct: 556  AGHIKELFYVIDTMRSPPKKKFKPTTLEKWDPRLEPDVVVYNAVLNACVQRKQWEGAFWV 615

Query: 999  XXXXXXXXXXPPTTTYGLVMEVMLACE 1079
                      P   TYGL+MEVMLACE
Sbjct: 616  LQQLKQRGQKPSPVTYGLIMEVMLACE 642