BLASTX nr result
ID: Cephaelis21_contig00022598
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00022598
(355 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002263704.1| PREDICTED: pentatricopeptide repeat-containi... 125 5e-27
ref|XP_002530609.1| pentatricopeptide repeat-containing protein,... 120 9e-26
ref|XP_004144368.1| PREDICTED: pentatricopeptide repeat-containi... 111 7e-23
ref|NP_190543.1| pentatricopeptide repeat-containing protein [Ar... 107 8e-22
ref|XP_002875993.1| pentatricopeptide repeat-containing protein ... 100 2e-19
>ref|XP_002263704.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49740-like [Vitis vinifera]
Length = 729
Score = 125 bits (313), Expect = 5e-27
Identities = 62/116 (53%), Positives = 79/116 (68%)
Frame = +1
Query: 4 SCSCSREAIQVHAQATKMGFEYCTSVSNAAIRMYANCGNLNAARKVFERLKEKDIVSWNT 183
SCS +R + QVHAQA KMGFE CT VSNAA+ MY++CGNL+A VF+RL+EKD++SWN
Sbjct: 296 SCSSARVSHQVHAQAIKMGFEACTPVSNAAMTMYSSCGNLHAVHMVFDRLEEKDLISWNI 355
Query: 184 MITSYAQEKLGREANLVYFQMQREGLQPDEFTIGXXXXXXXXXXXXEIIYAAVMKN 351
+I +YAQ R A L + QMQR G++PDEFTIG ++ A V KN
Sbjct: 356 IIMNYAQGNFYRLAILAFLQMQRAGIEPDEFTIGSLLASSESLEIVKMFQALVSKN 411
Score = 71.6 bits (174), Expect = 6e-11
Identities = 38/93 (40%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Frame = +1
Query: 4 SCSCSREAIQVHAQATKMGFEYCTSVSNAAIRMYANCGNLNAARKVFERLKEKDIVSWNT 183
S S R Q+H + G TS+ NA I MYA CG+L+ + ++F + +DIVSWN
Sbjct: 495 SISALRHGKQIHGYILRSGVFSVTSLGNALITMYAKCGDLDWSLRIFNVMNGRDIVSWNA 554
Query: 184 MITSYAQEKLGREANLVYFQMQRE-GLQPDEFT 279
MI++YAQ G+EA + MQ G++PD+ T
Sbjct: 555 MISAYAQHGKGKEAVHFFKAMQDSGGVKPDQAT 587
>ref|XP_002530609.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223529857|gb|EEF31789.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 684
Score = 120 bits (302), Expect = 9e-26
Identities = 62/117 (52%), Positives = 77/117 (65%)
Frame = +1
Query: 4 SCSCSREAIQVHAQATKMGFEYCTSVSNAAIRMYANCGNLNAARKVFERLKEKDIVSWNT 183
SC + Q HAQA KMGFE TS+SNA I MY++C +L+AARKVFERL+ KD VSWNT
Sbjct: 309 SCLHAEIGYQFHAQAIKMGFEASTSLSNATITMYSSCKDLHAARKVFERLERKDPVSWNT 368
Query: 184 MITSYAQEKLGREANLVYFQMQREGLQPDEFTIGXXXXXXXXXXXXEIIYAAVMKNA 354
MI+SY Q GR A L Y +M+R G +PDEFT G E+I+A V +N+
Sbjct: 369 MISSYTQGNFGRLAILAYLEMRRTGTEPDEFTFGSLLASSELLETVEMIHALVFRNS 425
Score = 64.7 bits (156), Expect = 7e-09
Identities = 34/84 (40%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Frame = +1
Query: 31 QVHAQATKMGFEYCTSVSNAAIRMYANCGNLNAARKVFERLKEKDIVSWNTMITSYAQEK 210
QVH + GF S+ N I YA CG ++ + +VF L +KD VSWN +I++YAQ
Sbjct: 517 QVHGYIMRSGFSSEVSLGNGLITFYAKCGLIDWSSRVFTALAKKDTVSWNALISAYAQHG 576
Query: 211 LGREANLVYFQMQREG-LQPDEFT 279
G EA + MQ +QPD+ T
Sbjct: 577 KGNEAIYQFEAMQHSSEVQPDDAT 600
>ref|XP_004144368.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49740-like [Cucumis sativus]
Length = 735
Score = 111 bits (277), Expect = 7e-23
Identities = 55/116 (47%), Positives = 71/116 (61%)
Frame = +1
Query: 4 SCSCSREAIQVHAQATKMGFEYCTSVSNAAIRMYANCGNLNAARKVFERLKEKDIVSWNT 183
SCS + A QVH+QA K+GFE T V N+ I MY +CG AA VF+ L EKD++SWN
Sbjct: 303 SCSIIQVAQQVHSQAIKLGFESFTLVGNSTITMYTSCGEFQAANAVFQMLIEKDLISWNA 362
Query: 184 MITSYAQEKLGREANLVYFQMQREGLQPDEFTIGXXXXXXXXXXXXEIIYAAVMKN 351
+I+SY Q G+ A L + QMQR G+ PDEFT G E+++A V KN
Sbjct: 363 IISSYVQGNFGKSAVLAFLQMQRTGIGPDEFTFGSLLGVSEFIEIVEMVHAYVYKN 418
Score = 59.7 bits (143), Expect = 2e-07
Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Frame = +1
Query: 31 QVHAQATKMGFEYCTSVSNAAIRMYANCGNLNAARKVFERLKEKDIVSWNTMITSYAQEK 210
Q+H + G TS+ N I MY+ CG L + + F + E+DIVSWN++I++YAQ
Sbjct: 511 QIHGYILRSGNSSETSLCNGLITMYSKCGLLGWSLRTFNVMIERDIVSWNSIISAYAQHG 570
Query: 211 LGREANLVYFQMQ-REGLQPDEFT 279
G+EA + MQ + PD+ T
Sbjct: 571 QGKEAVDCFKAMQDMPSIMPDQAT 594
>ref|NP_190543.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183390|sp|Q9M2Y4.1|PP276_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g49740 gi|6723419|emb|CAB66912.1| putative protein
[Arabidopsis thaliana] gi|332645063|gb|AEE78584.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 737
Score = 107 bits (268), Expect = 8e-22
Identities = 55/116 (47%), Positives = 73/116 (62%)
Frame = +1
Query: 1 GSCSCSREAIQVHAQATKMGFEYCTSVSNAAIRMYANCGNLNAARKVFERLKEKDIVSWN 180
GSCSC+ QVH A K G+E T VSNA + MY++ + AA KVFE L+EKD+V+WN
Sbjct: 299 GSCSCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWN 358
Query: 181 TMITSYAQEKLGREANLVYFQMQREGLQPDEFTIGXXXXXXXXXXXXEIIYAAVMK 348
TMI+SY Q KLG+ A VY +M G++PDEFT G E++ A ++K
Sbjct: 359 TMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEMVQACIIK 414
Score = 63.5 bits (153), Expect = 2e-08
Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = +1
Query: 31 QVHAQATKMGFEYCTSVSNAAIRMYANCGNLNAARKVFERLKEKDIVSWNTMITSYAQEK 210
Q HA + G T + NA I MY+ CG + + +VF ++ EKD+VSWN++I++Y++
Sbjct: 510 QTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHG 569
Query: 211 LGREANLVYFQMQREG-LQPDEFT 279
G A Y MQ EG + PD T
Sbjct: 570 EGENAVNTYKTMQDEGKVIPDAAT 593
>ref|XP_002875993.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297321831|gb|EFH52252.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 731
Score = 100 bits (248), Expect = 2e-19
Identities = 50/115 (43%), Positives = 70/115 (60%)
Frame = +1
Query: 4 SCSCSREAIQVHAQATKMGFEYCTSVSNAAIRMYANCGNLNAARKVFERLKEKDIVSWNT 183
SCSC QVH + K G+E T VSN+ + MY++ + AA KVFE L+EKD+++WNT
Sbjct: 294 SCSCETMGHQVHGLSIKTGYEEYTLVSNSTMTMYSSFEDFGAAHKVFESLEEKDLITWNT 353
Query: 184 MITSYAQEKLGREANLVYFQMQREGLQPDEFTIGXXXXXXXXXXXXEIIYAAVMK 348
MI+ Y Q LG+ A L+Y +M G++PDEFT G E++ A V+K
Sbjct: 354 MISGYNQANLGQSALLLYKRMHGIGVKPDEFTFGSLLASSLDLDALEMVQACVIK 408
Score = 68.6 bits (166), Expect = 5e-10
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Frame = +1
Query: 31 QVHAQATKMGFEYCTSVSNAAIRMYANCGNLNAARKVFERLKEKDIVSWNTMITSYAQEK 210
Q HA A + G T + NA I MY+ CG L + VF ++ +KD VSWN++I++YA+
Sbjct: 504 QTHAYALRHGQFKETLIGNAFINMYSQCGTLQKSLAVFHQMSDKDTVSWNSLISAYARHG 563
Query: 211 LGREANLVYFQMQREG-LQPDEFTI 282
G A L Y MQ EG + PD T+
Sbjct: 564 KGESAVLTYKTMQDEGKVDPDAATL 588