BLASTX nr result

ID: Cephaelis21_contig00022592 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00022592
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265565.2| PREDICTED: F-box protein At-B-like [Vitis vi...    73   3e-11
emb|CBI39868.3| unnamed protein product [Vitis vinifera]               73   3e-11
emb|CAC36388.1| hypothetical protein [Capsella rubella]                56   3e-06
ref|NP_175955.1| F-box protein At-B [Arabidopsis thaliana] gi|75...    55   5e-06
emb|CAC36384.1| hypothetical protein [Arabidopsis thaliana]            55   5e-06

>ref|XP_002265565.2| PREDICTED: F-box protein At-B-like [Vitis vinifera]
          Length = 619

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 37/55 (67%), Positives = 42/55 (76%)
 Frame = +3

Query: 111 LEGLPDSLITEIVQKLDLESLCSGACVSRTFRSCVSQVLSTRSSLDLSAFSPDAE 275
           LEGLP +LI EI+ KLD E+LCS ACVSR  R  VS+ L   SSLDLSAFSPDA+
Sbjct: 18  LEGLPTTLINEIIVKLDTETLCSVACVSRALRFAVSEALPLSSSLDLSAFSPDAQ 72


>emb|CBI39868.3| unnamed protein product [Vitis vinifera]
          Length = 607

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 37/55 (67%), Positives = 42/55 (76%)
 Frame = +3

Query: 111 LEGLPDSLITEIVQKLDLESLCSGACVSRTFRSCVSQVLSTRSSLDLSAFSPDAE 275
           LEGLP +LI EI+ KLD E+LCS ACVSR  R  VS+ L   SSLDLSAFSPDA+
Sbjct: 6   LEGLPTTLINEIIVKLDTETLCSVACVSRALRFAVSEALPLSSSLDLSAFSPDAQ 60


>emb|CAC36388.1| hypothetical protein [Capsella rubella]
          Length = 606

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 31/49 (63%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
 Frame = +3

Query: 132 LITEIVQKLDLESLCSGACVSRTFRSC-VSQVLSTRSSLDLSAFSPDAE 275
           L  EI+++LDLE+LCS ACVS T RS  VS VL + +SLDLS FSPD E
Sbjct: 9   LAEEILKRLDLENLCSVACVSTTLRSAVVSGVLPSLTSLDLSVFSPDEE 57


>ref|NP_175955.1| F-box protein At-B [Arabidopsis thaliana]
           gi|75339120|sp|Q9ZWC6.1|ATB_ARATH RecName: Full=F-box
           protein At-B gi|8778504|gb|AAF79512.1|AC002328_20
           F20N2.2 [Arabidopsis thaliana]
           gi|20856547|gb|AAM26672.1| At1g55590/F20N2_18
           [Arabidopsis thaliana] gi|24111385|gb|AAN46816.1|
           At1g55590/F20N2_18 [Arabidopsis thaliana]
           gi|332195148|gb|AEE33269.1| F-box protein At-B
           [Arabidopsis thaliana]
          Length = 607

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 31/49 (63%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
 Frame = +3

Query: 132 LITEIVQKLDLESLCSGACVSRTFRSC-VSQVLSTRSSLDLSAFSPDAE 275
           L  EI+++LDLE+LCS ACVS T RS  VS VL + +SLDLS FSPD E
Sbjct: 9   LAEEILKRLDLENLCSVACVSTTLRSAVVSGVLPSLTSLDLSVFSPDDE 57


>emb|CAC36384.1| hypothetical protein [Arabidopsis thaliana]
          Length = 601

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 31/49 (63%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
 Frame = +3

Query: 132 LITEIVQKLDLESLCSGACVSRTFRSC-VSQVLSTRSSLDLSAFSPDAE 275
           L  EI+++LDLE+LCS ACVS T RS  VS VL + +SLDLS FSPD E
Sbjct: 3   LAEEILKRLDLENLCSVACVSTTLRSAVVSGVLPSLTSLDLSVFSPDDE 51


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