BLASTX nr result
ID: Cephaelis21_contig00022577
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00022577
(1687 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q8L6J1.2|RPO3B_TOBAC RecName: Full=DNA-directed RNA polymeras... 494 e-137
sp|P69242.1|RPOT3_NICSY RecName: Full=DNA-directed RNA polymeras... 494 e-137
emb|CAC95026.1| plastid RNA polymerase [Nicotiana tabacum] 484 e-134
emb|CBI36559.3| unnamed protein product [Vitis vinifera] 480 e-133
ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 480 e-133
>sp|Q8L6J1.2|RPO3B_TOBAC RecName: Full=DNA-directed RNA polymerase 3B, chloroplastic; AltName:
Full=NictaRpoT3-tom; AltName: Full=T7 bacteriophage-type
single subunit RNA polymerase 3B; Flags: Precursor
gi|21425667|emb|CAC95021.2| chloroplast RNA polymerase
[Nicotiana tabacum]
Length = 977
Score = 494 bits (1273), Expect = e-137
Identities = 241/290 (83%), Positives = 267/290 (92%)
Frame = -2
Query: 1686 AALGNDSIEAAGVNLIAGDKPADVYSEIAMRVRDIIRLDSEKDPAIDPNALIAKLLLDQV 1507
AALG DS+EAA VNL+AG+KPADVY+EIA+RV IIR DS KDPAIDPNAL+AKLL+DQV
Sbjct: 688 AALGRDSMEAAAVNLVAGEKPADVYTEIALRVDHIIRGDSIKDPAIDPNALLAKLLIDQV 747
Query: 1506 DRKLVKQTVMTSVYGITYVGAREQINRRLEEKGLITDDMLLFSAACYAAKVTMAALGELF 1327
DRKLVKQTVMTSVYG+TYVGAREQI RRLEEKGLI DD LLF+A+CYAAKVT+AALGELF
Sbjct: 748 DRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLIDDDRLLFTASCYAAKVTLAALGELF 807
Query: 1326 ERARGIMVWLGDCAKVIASENQPVQWMTPLGLPIVQPYFKSQRRMIKTSLQVLAWQREGD 1147
+ ARG M WLGDCAKVIA ENQPV+W TPLGLP+VQPYFK+QR +I+TSLQ+LA QREGD
Sbjct: 808 QAARGTMTWLGDCAKVIALENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQILALQREGD 867
Query: 1146 SVEARKQRTAFPPNFVHSLDSSHMMMTAVACRDAGLHFAGVHDSFWTHACDVDKMNQILR 967
+VE RKQRTAFPPNFVHSLD SHMMMTAVACRDAGL FAGVHDSFWTHACDVD+MN+ILR
Sbjct: 868 AVEVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLQFAGVHDSFWTHACDVDQMNRILR 927
Query: 966 EKFVELYSMPILENLLESFQTSYPCLNFPALPKRGNFNLREVLQSPYFFN 817
EKFVELYS+PILE+LLE+FQ SYP L FP LPKRG+FNLREVL+SPYFFN
Sbjct: 928 EKFVELYSLPILEDLLENFQKSYPALTFPPLPKRGDFNLREVLESPYFFN 977
>sp|P69242.1|RPOT3_NICSY RecName: Full=DNA-directed RNA polymerase 3, chloroplastic; AltName:
Full=NsRpoT-C; AltName: Full=T7 bacteriophage-type single
subunit RNA polymerase 3; Flags: Precursor
gi|59800203|sp|P69243.1|RPO3A_TOBAC RecName:
Full=DNA-directed RNA polymerase 3A, chloroplastic;
AltName: Full=NictaRpoT3-syl; AltName: Full=T7
bacteriophage-type single subunit RNA polymerase 3A;
Flags: Precursor gi|21425641|emb|CAC82576.3| phage-type
RNA polymerase [Nicotiana sylvestris]
gi|21425679|emb|CAC95027.2| plastid RNA polymerase
[Nicotiana tabacum] gi|24475541|dbj|BAC22693.1| T7
bacteriophage-type single subunit RNA polymerase
[Nicotiana sylvestris] gi|24475543|dbj|BAC22694.1| T7
bacteriophage-type single subunit RNA polymerase
[Nicotiana sylvestris]
Length = 977
Score = 494 bits (1273), Expect = e-137
Identities = 243/290 (83%), Positives = 266/290 (91%)
Frame = -2
Query: 1686 AALGNDSIEAAGVNLIAGDKPADVYSEIAMRVRDIIRLDSEKDPAIDPNALIAKLLLDQV 1507
AALG DS+EAA VNL+AGDKPADVY+EIA+RV IIR DS KDPA DPNAL+AKLL+DQV
Sbjct: 688 AALGRDSMEAAAVNLVAGDKPADVYTEIALRVDHIIRGDSIKDPATDPNALLAKLLIDQV 747
Query: 1506 DRKLVKQTVMTSVYGITYVGAREQINRRLEEKGLITDDMLLFSAACYAAKVTMAALGELF 1327
DRKLVKQTVMTSVYG+TYVGAREQI RRLEEKGLI DD LLF+A+CYAAKVT+AALGELF
Sbjct: 748 DRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLIDDDRLLFTASCYAAKVTLAALGELF 807
Query: 1326 ERARGIMVWLGDCAKVIASENQPVQWMTPLGLPIVQPYFKSQRRMIKTSLQVLAWQREGD 1147
+ ARG M WLGDCAKVIASENQPV+W TPLGLP+VQPYFK+QR +I+TSLQVLA QREGD
Sbjct: 808 QAARGTMTWLGDCAKVIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGD 867
Query: 1146 SVEARKQRTAFPPNFVHSLDSSHMMMTAVACRDAGLHFAGVHDSFWTHACDVDKMNQILR 967
+VE RKQRTAFPPNFVHSLD SHMMMTAVACRDAGL FAGVHDSFWTHACDVD+MN+ILR
Sbjct: 868 TVEVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLQFAGVHDSFWTHACDVDQMNRILR 927
Query: 966 EKFVELYSMPILENLLESFQTSYPCLNFPALPKRGNFNLREVLQSPYFFN 817
EKFVELYSMPILE+LLESFQ SYP L FP LPKRG+F+L EVL+SPYFFN
Sbjct: 928 EKFVELYSMPILEDLLESFQNSYPALTFPPLPKRGDFDLVEVLESPYFFN 977
>emb|CAC95026.1| plastid RNA polymerase [Nicotiana tabacum]
Length = 557
Score = 484 bits (1246), Expect = e-134
Identities = 238/290 (82%), Positives = 264/290 (91%)
Frame = -2
Query: 1686 AALGNDSIEAAGVNLIAGDKPADVYSEIAMRVRDIIRLDSEKDPAIDPNALIAKLLLDQV 1507
AALG DS+EAA VNL+AG+KPADVY+EIA+RV IIR DS KDPAIDPNAL+AKLL+DQV
Sbjct: 271 AALGRDSMEAAAVNLVAGEKPADVYTEIALRVDHIIRGDSIKDPAIDPNALLAKLLIDQV 330
Query: 1506 DRKLVKQTVMTSVYGITYVGAREQINRRLEEKGLITDDMLLFSAACYAAKVTMAALGELF 1327
DRKLVKQTVMTSVYG+TYVGAREQI RRLEEKGLI DD LLF+A+CY VT+AALGELF
Sbjct: 331 DRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLIDDDRLLFTASCY---VTLAALGELF 387
Query: 1326 ERARGIMVWLGDCAKVIASENQPVQWMTPLGLPIVQPYFKSQRRMIKTSLQVLAWQREGD 1147
+ ARG M WLGDCAKVIA ENQPV+W TPLGLP+VQPYFK+QR +I+TSLQ+LA QREGD
Sbjct: 388 QAARGTMTWLGDCAKVIALENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQILALQREGD 447
Query: 1146 SVEARKQRTAFPPNFVHSLDSSHMMMTAVACRDAGLHFAGVHDSFWTHACDVDKMNQILR 967
+VE RKQRTAFPPNFVHSLD SHMMMTAVACRDAGL FAGVHDSFWTHACDVD+MN+ILR
Sbjct: 448 AVEVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLQFAGVHDSFWTHACDVDQMNRILR 507
Query: 966 EKFVELYSMPILENLLESFQTSYPCLNFPALPKRGNFNLREVLQSPYFFN 817
EKFVELYS+PILE+LLE+FQ SYP L FP LPKRG+FNLREVL+SPYFFN
Sbjct: 508 EKFVELYSLPILEDLLENFQKSYPALTFPPLPKRGDFNLREVLESPYFFN 557
>emb|CBI36559.3| unnamed protein product [Vitis vinifera]
Length = 808
Score = 480 bits (1235), Expect = e-133
Identities = 234/290 (80%), Positives = 261/290 (90%)
Frame = -2
Query: 1686 AALGNDSIEAAGVNLIAGDKPADVYSEIAMRVRDIIRLDSEKDPAIDPNALIAKLLLDQV 1507
AALG +S+EA+ VNL+AG+KPADVYSEIA RV +I++ DS KDPA DP AL+AK+L+ QV
Sbjct: 519 AALGRNSLEASAVNLVAGEKPADVYSEIAARVHEIMKRDSNKDPATDPKALLAKVLIGQV 578
Query: 1506 DRKLVKQTVMTSVYGITYVGAREQINRRLEEKGLITDDMLLFSAACYAAKVTMAALGELF 1327
DRKLVKQTVMTSVYG+TY+GAREQI RRL EKGLITD+ LLF+AACYAAKVT+AALGE+F
Sbjct: 579 DRKLVKQTVMTSVYGVTYIGAREQIKRRLAEKGLITDERLLFTAACYAAKVTLAALGEIF 638
Query: 1326 ERARGIMVWLGDCAKVIASENQPVQWMTPLGLPIVQPYFKSQRRMIKTSLQVLAWQREGD 1147
+ AR IM WLG+CAKVIASENQPVQW TPLGLP++QPY KS+R +I+TSLQVLA QREG
Sbjct: 639 QAARDIMAWLGECAKVIASENQPVQWTTPLGLPVIQPYCKSERHLIRTSLQVLALQREGS 698
Query: 1146 SVEARKQRTAFPPNFVHSLDSSHMMMTAVACRDAGLHFAGVHDSFWTHACDVDKMNQILR 967
V RKQRTAFPPNFVHSLD SHMMMTAVACRDAGL FAGVHDSFWTHACDVDKMNQILR
Sbjct: 699 VVVIRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLCFAGVHDSFWTHACDVDKMNQILR 758
Query: 966 EKFVELYSMPILENLLESFQTSYPCLNFPALPKRGNFNLREVLQSPYFFN 817
EKFVELYSMPILENLLESFQTS+P L FP LP RGNF+LREVL+SPYFFN
Sbjct: 759 EKFVELYSMPILENLLESFQTSHPTLTFPPLPDRGNFDLREVLESPYFFN 808
>ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Vitis
vinifera]
Length = 979
Score = 480 bits (1235), Expect = e-133
Identities = 234/290 (80%), Positives = 261/290 (90%)
Frame = -2
Query: 1686 AALGNDSIEAAGVNLIAGDKPADVYSEIAMRVRDIIRLDSEKDPAIDPNALIAKLLLDQV 1507
AALG +S+EA+ VNL+AG+KPADVYSEIA RV +I++ DS KDPA DP AL+AK+L+ QV
Sbjct: 690 AALGRNSLEASAVNLVAGEKPADVYSEIAARVHEIMKRDSNKDPATDPKALLAKVLIGQV 749
Query: 1506 DRKLVKQTVMTSVYGITYVGAREQINRRLEEKGLITDDMLLFSAACYAAKVTMAALGELF 1327
DRKLVKQTVMTSVYG+TY+GAREQI RRL EKGLITD+ LLF+AACYAAKVT+AALGE+F
Sbjct: 750 DRKLVKQTVMTSVYGVTYIGAREQIKRRLAEKGLITDERLLFTAACYAAKVTLAALGEIF 809
Query: 1326 ERARGIMVWLGDCAKVIASENQPVQWMTPLGLPIVQPYFKSQRRMIKTSLQVLAWQREGD 1147
+ AR IM WLG+CAKVIASENQPVQW TPLGLP++QPY KS+R +I+TSLQVLA QREG
Sbjct: 810 QAARDIMAWLGECAKVIASENQPVQWTTPLGLPVIQPYCKSERHLIRTSLQVLALQREGS 869
Query: 1146 SVEARKQRTAFPPNFVHSLDSSHMMMTAVACRDAGLHFAGVHDSFWTHACDVDKMNQILR 967
V RKQRTAFPPNFVHSLD SHMMMTAVACRDAGL FAGVHDSFWTHACDVDKMNQILR
Sbjct: 870 VVVIRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLCFAGVHDSFWTHACDVDKMNQILR 929
Query: 966 EKFVELYSMPILENLLESFQTSYPCLNFPALPKRGNFNLREVLQSPYFFN 817
EKFVELYSMPILENLLESFQTS+P L FP LP RGNF+LREVL+SPYFFN
Sbjct: 930 EKFVELYSMPILENLLESFQTSHPTLTFPPLPDRGNFDLREVLESPYFFN 979