BLASTX nr result

ID: Cephaelis21_contig00022574 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00022574
         (209 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK00827.1| predicted protein [Hordeum vulgare subsp. vulgare]     64   1e-08
ref|XP_002874654.1| hypothetical protein ARALYDRAFT_489930 [Arab...    64   1e-08
ref|NP_192830.1| RNA polymerase II transcriptional coactivator K...    62   5e-08
ref|NP_001238108.1| uncharacterized protein LOC100499671 [Glycin...    61   8e-08
ref|XP_002266998.1| PREDICTED: RNA polymerase II transcriptional...    60   2e-07

>dbj|BAK00827.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 190

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/41 (78%), Positives = 35/41 (85%)
 Frame = +2

Query: 8   LTIGELSKSRRVTLTEFKGKTLVSIREFYSKEGKELPTSKG 130
           L I  LSKSRRVTL EFKG TLVSIRE+Y K+GKE+PTSKG
Sbjct: 121 LIICRLSKSRRVTLQEFKGMTLVSIREYYLKDGKEMPTSKG 161


>ref|XP_002874654.1| hypothetical protein ARALYDRAFT_489930 [Arabidopsis lyrata subsp.
           lyrata] gi|297320491|gb|EFH50913.1| hypothetical protein
           ARALYDRAFT_489930 [Arabidopsis lyrata subsp. lyrata]
          Length = 165

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/41 (75%), Positives = 34/41 (82%)
 Frame = +2

Query: 8   LTIGELSKSRRVTLTEFKGKTLVSIREFYSKEGKELPTSKG 130
           L I  LS  RRVT+ EFKGKTLVSIRE+Y K+GKELPTSKG
Sbjct: 96  LIIWRLSDKRRVTIQEFKGKTLVSIREYYKKDGKELPTSKG 136


>ref|NP_192830.1| RNA polymerase II transcriptional coactivator KELP [Arabidopsis
           thaliana] gi|145333013|ref|NP_001078372.1| RNA
           polymerase II transcriptional coactivator KELP
           [Arabidopsis thaliana]
           gi|37079408|sp|O65155.1|KELP_ARATH RecName: Full=RNA
           polymerase II transcriptional coactivator KELP
           gi|2997686|gb|AAC08575.1| putative transcriptional
           co-activator [Arabidopsis thaliana]
           gi|3513735|gb|AAC33951.1| contains similarity to RNA
           polymerase II transcription cofactor p15 [Arabidopsis
           thaliana] gi|4539366|emb|CAB40060.1| putative protein
           [Arabidopsis thaliana] gi|7267790|emb|CAB81193.1|
           putative protein [Arabidopsis thaliana]
           gi|21554027|gb|AAM63108.1| putative transcriptional
           coactivator [Arabidopsis thaliana]
           gi|29028806|gb|AAO64782.1| At4g10920 [Arabidopsis
           thaliana] gi|110736559|dbj|BAF00245.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|110738319|dbj|BAF01087.1| hypothetical protein
           [Arabidopsis thaliana] gi|332657543|gb|AEE82943.1| RNA
           polymerase II transcriptional coactivator KELP
           [Arabidopsis thaliana] gi|332657544|gb|AEE82944.1| RNA
           polymerase II transcriptional coactivator KELP
           [Arabidopsis thaliana]
          Length = 165

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 30/41 (73%), Positives = 34/41 (82%)
 Frame = +2

Query: 8   LTIGELSKSRRVTLTEFKGKTLVSIREFYSKEGKELPTSKG 130
           L I  LS  RRVT+ EFKGK+LVSIRE+Y K+GKELPTSKG
Sbjct: 96  LIICRLSDKRRVTIQEFKGKSLVSIREYYKKDGKELPTSKG 136


>ref|NP_001238108.1| uncharacterized protein LOC100499671 [Glycine max]
           gi|255625681|gb|ACU13185.1| unknown [Glycine max]
          Length = 163

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 29/41 (70%), Positives = 34/41 (82%)
 Frame = +2

Query: 8   LTIGELSKSRRVTLTEFKGKTLVSIREFYSKEGKELPTSKG 130
           L I  LS  RRVT+ +F+GKTLVSIRE+Y K+GKELPTSKG
Sbjct: 95  LIICRLSDKRRVTIQDFRGKTLVSIREYYKKDGKELPTSKG 135


>ref|XP_002266998.1| PREDICTED: RNA polymerase II transcriptional coactivator KELP-like
           [Vitis vinifera]
          Length = 187

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 29/41 (70%), Positives = 34/41 (82%)
 Frame = +2

Query: 8   LTIGELSKSRRVTLTEFKGKTLVSIREFYSKEGKELPTSKG 130
           L I  LS  RRVT+ +F+GKTLVSIREFY K+GKELP+SKG
Sbjct: 117 LIICRLSDRRRVTIQDFRGKTLVSIREFYRKDGKELPSSKG 157


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