BLASTX nr result

ID: Cephaelis21_contig00022541 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00022541
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]          67   2e-09
gb|AAT40504.2| Polyprotein, putative [Solanum demissum]                65   2e-09
ref|ZP_11072118.1| hypothetical protein B879_04163 [Cecembia lon...    66   3e-09
gb|AAT40500.1| Putative reverse transcriptase, identical [Solanu...    65   3e-09
emb|CCH50976.1| T4.15 [Malus x robusta]                                64   4e-09

>gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 562

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 30/46 (65%), Positives = 39/46 (84%)
 Frame = -2

Query: 173 LDKIRNTCIKKKIGIALIDEKMRETRLRWFGHVHRRPLEAPVRRVE 36
           LDKIRN  I++++G+A I EK+ E+RLRWFGHV RRP+E PVRRV+
Sbjct: 446 LDKIRNEDIRERVGVAPIVEKIVESRLRWFGHVRRRPIEHPVRRVD 491


>gb|AAT40504.2| Polyprotein, putative [Solanum demissum]
          Length = 868

 Score = 64.7 bits (156), Expect(2) = 2e-09
 Identities = 28/45 (62%), Positives = 36/45 (80%)
 Frame = -2

Query: 170 DKIRNTCIKKKIGIALIDEKMRETRLRWFGHVHRRPLEAPVRRVE 36
           DKIRN  I++K+G+A + +K+RE RLRWFGHV RR  +APVRR E
Sbjct: 597 DKIRNEVIREKVGVASVVDKLREARLRWFGHVKRRSADAPVRRCE 641



 Score = 21.6 bits (44), Expect(2) = 2e-09
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = -3

Query: 193 WMCGHT 176
           WMCGHT
Sbjct: 589 WMCGHT 594


>ref|ZP_11072118.1| hypothetical protein B879_04163 [Cecembia lonarensis LW9]
           gi|405551390|gb|EKB47241.1| hypothetical protein
           B879_04163 [Cecembia lonarensis LW9]
          Length = 133

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 30/45 (66%), Positives = 36/45 (80%)
 Frame = -2

Query: 170 DKIRNTCIKKKIGIALIDEKMRETRLRWFGHVHRRPLEAPVRRVE 36
           DKIRN  I+ K+G+A I+ KMRE RLRWFGHV RRP +APVRR +
Sbjct: 36  DKIRNEDIQGKVGVAEIEGKMRENRLRWFGHVQRRPTDAPVRRCD 80


>gb|AAT40500.1| Putative reverse transcriptase, identical [Solanum demissum]
          Length = 213

 Score = 64.7 bits (156), Expect(2) = 3e-09
 Identities = 28/45 (62%), Positives = 36/45 (80%)
 Frame = -2

Query: 170 DKIRNTCIKKKIGIALIDEKMRETRLRWFGHVHRRPLEAPVRRVE 36
           DKIRN  I++K+G+A + +K+RE RLRWFGHV RR  +APVRR E
Sbjct: 129 DKIRNEVIREKVGVASVVDKLREARLRWFGHVKRRSADAPVRRCE 173



 Score = 21.6 bits (44), Expect(2) = 3e-09
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = -3

Query: 193 WMCGHT 176
           WMCGHT
Sbjct: 121 WMCGHT 126


>emb|CCH50976.1| T4.15 [Malus x robusta]
          Length = 986

 Score = 63.9 bits (154), Expect(2) = 4e-09
 Identities = 28/45 (62%), Positives = 35/45 (77%)
 Frame = -2

Query: 170  DKIRNTCIKKKIGIALIDEKMRETRLRWFGHVHRRPLEAPVRRVE 36
            DKIRN  I+ K+G+A I  KMRE +LRWFGHV RRP +AP+RR +
Sbjct: 889  DKIRNEDIRGKVGVAEIQGKMRENQLRWFGHVQRRPTDAPIRRCD 933



 Score = 21.6 bits (44), Expect(2) = 4e-09
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = -3

Query: 193 WMCGHT 176
           WMCGHT
Sbjct: 881 WMCGHT 886


Top