BLASTX nr result

ID: Cephaelis21_contig00022540 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00022540
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520265.1| pentatricopeptide repeat-containing protein,...   199   1e-49
ref|XP_002302206.1| predicted protein [Populus trichocarpa] gi|2...   198   3e-49
ref|XP_002279169.1| PREDICTED: putative pentatricopeptide repeat...   196   2e-48
emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera]   196   2e-48
ref|XP_003629293.1| Pentatricopeptide repeat protein [Medicago t...   181   4e-44

>ref|XP_002520265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540484|gb|EEF42051.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 681

 Score =  199 bits (507), Expect = 1e-49
 Identities = 90/126 (71%), Positives = 106/126 (84%)
 Frame = +3

Query: 3   WNSMLTGYAMNGHGSQALNLFHQMRCSDVSPTDITFTAVLSACNHCGLIEEADKLFTAMK 182
           WNSML GYA NG+G + L LF++M+ + + PTDITFT VLSAC+HCGL+EE  K F  MK
Sbjct: 506 WNSMLMGYATNGYGLETLTLFNEMKQAGLRPTDITFTGVLSACDHCGLVEEGRKWFNIMK 565

Query: 183 HEYHIDPGIEHYSCMVDLFARAGCLEEAMNLIEQMPFKADASMWVSLLRGCVAHGDKFLG 362
           ++YHIDPGIEHYSCMVDLFARAGCL+EA+NL+E MPF+AD SMW S+LRGCVAHGDK LG
Sbjct: 566 YDYHIDPGIEHYSCMVDLFARAGCLKEALNLVEHMPFEADCSMWSSVLRGCVAHGDKDLG 625

Query: 363 KKVVDQ 380
           KKV  Q
Sbjct: 626 KKVAQQ 631


>ref|XP_002302206.1| predicted protein [Populus trichocarpa] gi|222843932|gb|EEE81479.1|
           predicted protein [Populus trichocarpa]
          Length = 681

 Score =  198 bits (504), Expect = 3e-49
 Identities = 90/126 (71%), Positives = 109/126 (86%)
 Frame = +3

Query: 3   WNSMLTGYAMNGHGSQALNLFHQMRCSDVSPTDITFTAVLSACNHCGLIEEADKLFTAMK 182
           WNSML GYA NGHG +AL LF++MR + V PT+ITFT VLSAC+HCGL++E  + F  M+
Sbjct: 505 WNSMLMGYATNGHGLEALTLFNEMRHAGVRPTEITFTGVLSACDHCGLVKEGWRWFNIMQ 564

Query: 183 HEYHIDPGIEHYSCMVDLFARAGCLEEAMNLIEQMPFKADASMWVSLLRGCVAHGDKFLG 362
           ++YHIDPGIEHYSCMVDLFARAGCLEEAMNLI++MPF+ADASMW S+LRGC+AHG+K LG
Sbjct: 565 YDYHIDPGIEHYSCMVDLFARAGCLEEAMNLIKRMPFEADASMWSSVLRGCMAHGEKDLG 624

Query: 363 KKVVDQ 380
           +KV  Q
Sbjct: 625 EKVAQQ 630



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 35/115 (30%), Positives = 56/115 (48%)
 Frame = +3

Query: 3   WNSMLTGYAMNGHGSQALNLFHQMRCSDVSPTDITFTAVLSACNHCGLIEEADKLFTAMK 182
           WNSM+ G + NG   +AL+LF  M   D+       T+V+SAC     +E  +++F A  
Sbjct: 404 WNSMIVGLSQNGCPVEALDLFCMMNKLDLRMNRFNLTSVISACASISSLELGEQIF-ARA 462

Query: 183 HEYHIDPGIEHYSCMVDLFARAGCLEEAMNLIEQMPFKADASMWVSLLRGCVAHG 347
               +D      + +VD + + G +E    L + M  K+D   W S+L G   +G
Sbjct: 463 TVVGLDSDEVISTSLVDFYCKCGFIEIGRKLFDTM-MKSDEISWNSMLMGYATNG 516


>ref|XP_002279169.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g77010, mitochondrial-like [Vitis vinifera]
          Length = 685

 Score =  196 bits (498), Expect = 2e-48
 Identities = 92/123 (74%), Positives = 102/123 (82%)
 Frame = +3

Query: 3   WNSMLTGYAMNGHGSQALNLFHQMRCSDVSPTDITFTAVLSACNHCGLIEEADKLFTAMK 182
           WNSML GYA NGHG +ALN+F QMR   V PTDITF  VLSAC+HCGL+EE  K F AMK
Sbjct: 506 WNSMLMGYATNGHGIEALNVFDQMRSVGVQPTDITFVGVLSACDHCGLVEEGRKWFYAMK 565

Query: 183 HEYHIDPGIEHYSCMVDLFARAGCLEEAMNLIEQMPFKADASMWVSLLRGCVAHGDKFLG 362
            +YHI+PGIEHYSCMVDL+ARAG LE+AMNLIEQMP KAD SMW S+LRGCVAHG+  LG
Sbjct: 566 LDYHINPGIEHYSCMVDLYARAGLLEDAMNLIEQMPLKADTSMWSSVLRGCVAHGNNILG 625

Query: 363 KKV 371
           KKV
Sbjct: 626 KKV 628


>emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera]
          Length = 1796

 Score =  196 bits (498), Expect = 2e-48
 Identities = 92/123 (74%), Positives = 102/123 (82%)
 Frame = +3

Query: 3   WNSMLTGYAMNGHGSQALNLFHQMRCSDVSPTDITFTAVLSACNHCGLIEEADKLFTAMK 182
           WNSML GYA NGHG +ALN+F QMR   V PTDITF  VLSAC+HCGL+EE  K F AMK
Sbjct: 506 WNSMLMGYATNGHGIEALNVFDQMRSVGVQPTDITFVGVLSACDHCGLVEEGRKWFYAMK 565

Query: 183 HEYHIDPGIEHYSCMVDLFARAGCLEEAMNLIEQMPFKADASMWVSLLRGCVAHGDKFLG 362
            +YHI+PGIEHYSCMVDL+ARAG LE+AMNLIEQMP KAD SMW S+LRGCVAHG+  LG
Sbjct: 566 LDYHINPGIEHYSCMVDLYARAGLLEDAMNLIEQMPLKADTSMWSSVLRGCVAHGNNILG 625

Query: 363 KKV 371
           KKV
Sbjct: 626 KKV 628



 Score =  110 bits (276), Expect = 9e-23
 Identities = 51/126 (40%), Positives = 80/126 (63%)
 Frame = +3

Query: 3    WNSMLTGYAMNGHGSQALNLFHQMRCSDVSPTDITFTAVLSACNHCGLIEEADKLFTAMK 182
            WN+M+ G A NG  S+AL +F ++      P +IT   VL ACN  GL++E   +F++M+
Sbjct: 1111 WNTMIMGLAYNGRVSKALEIFKELLIGGPPPDEITLAGVLLACNVGGLVDEGLSIFSSME 1170

Query: 183  HEYHIDPGIEHYSCMVDLFARAGCLEEAMNLIEQMPFKADASMWVSLLRGCVAHGDKFLG 362
             EY + P IEHY+C+VD+ +R G L+EAM+++E MP +    +W SLL  C  +GD    
Sbjct: 1171 KEYGVIPAIEHYACIVDMMSRGGKLKEAMDIVELMPHEPSGLIWGSLLCACEIYGDLRFT 1230

Query: 363  KKVVDQ 380
            ++V ++
Sbjct: 1231 ERVAER 1236


>ref|XP_003629293.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355523315|gb|AET03769.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 672

 Score =  181 bits (460), Expect = 4e-44
 Identities = 81/126 (64%), Positives = 102/126 (80%)
 Frame = +3

Query: 3   WNSMLTGYAMNGHGSQALNLFHQMRCSDVSPTDITFTAVLSACNHCGLIEEADKLFTAMK 182
           WN+ML GYA NG+G +AL LF++M  S V P+ ITFT +LSAC+HCGL+EE   LF  MK
Sbjct: 496 WNTMLMGYATNGYGIEALTLFNEMGYSGVRPSAITFTGILSACDHCGLVEEGRDLFRTMK 555

Query: 183 HEYHIDPGIEHYSCMVDLFARAGCLEEAMNLIEQMPFKADASMWVSLLRGCVAHGDKFLG 362
           H+Y I+PGIEHYSCMVDLFAR GC  EAM LIE+MPF+ADA+MW+S+LRGCV+HG+K +G
Sbjct: 556 HDYDINPGIEHYSCMVDLFARVGCFGEAMYLIEEMPFQADANMWLSVLRGCVSHGNKTIG 615

Query: 363 KKVVDQ 380
           K   ++
Sbjct: 616 KMAAEK 621


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