BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00022370
         (734 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...   193   4e-47
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   191   2e-46
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip...   184   1e-44
gb|AAD29058.1| putative non-LTR retroelement reverse transcripta...   183   3e-44
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]               181   1e-43

>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H;
            Endonuclease/exonuclease/phosphatase [Medicago
            truncatula]
          Length = 1246

 Score =  193 bits (490), Expect = 4e-47
 Identities = 100/244 (40%), Positives = 150/244 (61%)
 Frame = -1

Query: 734  DFVPTLLSSADNEKLVAPVSLQEVRDVIFLLDADSAPGPDGFSGQFYRTS*DIIAPNLLQ 555
            D +P+L+S+ DN  L+      EV++ +F L+ D APGP+GF G FY+T  DI+  +++Q
Sbjct: 424  DTIPSLVSNVDNNSLLRLPLWGEVKNAVFTLNGDGAPGPNGFGGHFYQTYWDIVGADVIQ 483

Query: 554  AVQEFFAGVPIPRSVASKLIVLLPKKDNPATYADFRPISLCNFLNKIFTCLMCRRLRDFL 375
            +VQ+FF    + +++ S LIVL+PK        D+RPI+L NF  KI + ++  RL D  
Sbjct: 484  SVQDFFISGQLAQNINSNLIVLIPKVPGARVMGDYRPIALANFQFKIISKILADRLADIT 543

Query: 374  PSLISEEQAAFLKDREIADNVVLVQEILHHLDKKVRRHNVLFKLDMAKAFDQVCWPFLQK 195
              +IS EQ  F++DR+I+  V+L  E ++ L+K+    NV  K+D+AKAFD + W FL  
Sbjct: 544  MRIISVEQRGFIRDRDISKCVILASEAINLLEKRQYGGNVALKVDIAKAFDTLDWNFLLA 603

Query: 194  VLHIFGFHPLFTNLVMNNMKGSWFSVLVNGNVSGFFQSTRELKQGDPLSPYLVLFCVDAL 15
            VL  FGF   F + ++  ++ +  SVLVNG   GFF  +  ++QGDPLSP L     + L
Sbjct: 604  VLQRFGFDEKFVHWILVILQSARLSVLVNGKAVGFFTCSHGVRQGDPLSPLLFCLVEEVL 663

Query: 14   SRGL 3
            SR L
Sbjct: 664  SRAL 667


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  191 bits (484), Expect = 2e-46
 Identities = 95/242 (39%), Positives = 148/242 (61%)
 Frame = -1

Query: 728  VPTLLSSADNEKLVAPVSLQEVRDVIFLLDADSAPGPDGFSGQFYRTS*DIIAPNLLQAV 549
            +P   S AD + L+ PV+ +E+R V+F + +D +PGPDG++ +F++ + +II      AV
Sbjct: 437  LPVRCSDADQQSLIRPVTAEEIRKVLFRMPSDKSPGPDGYTSEFFKATWEIIGDEFTLAV 496

Query: 548  QEFFAGVPIPRSVASKLIVLLPKKDNPATYADFRPISLCNFLNKIFTCLMCRRLRDFLPS 369
            Q FF    +P+ + S ++ L+PKK       D+RPIS CN L K+ + ++  RL+  LP 
Sbjct: 497  QSFFTKGFLPKGINSTILALIPKKTEAREMKDYRPISCCNVLYKVISKIIANRLKLVLPK 556

Query: 368  LISEEQAAFLKDREIADNVVLVQEILHHLDKKVRRHNVLFKLDMAKAFDQVCWPFLQKVL 189
             I+  Q+AF+KDR + +N++L  E++    K         K+D++KAFD V WPFL  V 
Sbjct: 557  FIAGNQSAFVKDRLLIENLLLATELVKDYHKDTISTRCAIKIDISKAFDSVQWPFLINVF 616

Query: 188  HIFGFHPLFTNLVMNNMKGSWFSVLVNGNVSGFFQSTRELKQGDPLSPYLVLFCVDALSR 9
             I GF   F + +   +  + FSV VNG ++G+FQS+R L+QG  LSPYL + C+D LS+
Sbjct: 617  TILGFPREFIHWINICITTASFSVQVNGELAGYFQSSRGLRQGCALSPYLFVICMDVLSK 676

Query: 8    GL 3
             L
Sbjct: 677  ML 678


>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
            72.31) [Arabidopsis thaliana]
          Length = 928

 Score =  184 bits (468), Expect = 1e-44
 Identities = 97/244 (39%), Positives = 143/244 (58%)
 Frame = -1

Query: 734  DFVPTLLSSADNEKLVAPVSLQEVRDVIFLLDADSAPGPDGFSGQFYRTS*DIIAPNLLQ 555
            D +P   S +D E L   VS +E+  V+F +  D +PGPDG++ +FY+ + +II    + 
Sbjct: 323  DLLPYRCSDSDKEMLTNHVSAEEIHKVVFSMPNDKSPGPDGYTAEFYKGAWNIIGAEFIL 382

Query: 554  AVQEFFAGVPIPRSVASKLIVLLPKKDNPATYADFRPISLCNFLNKIFTCLMCRRLRDFL 375
            A+Q FFA   +P+ + S ++ L+PKK       D+RPIS CN L K+ + ++  RL+  L
Sbjct: 383  AIQSFFAKGFLPKGINSTILALIPKKKEAKEMKDYRPISCCNVLYKVISKIIANRLKLVL 442

Query: 374  PSLISEEQAAFLKDREIADNVVLVQEILHHLDKKVRRHNVLFKLDMAKAFDQVCWPFLQK 195
            P  I   Q+AF+KDR + +NV+L  EI+    K         K+D++KAFD V W FL  
Sbjct: 443  PKFIVGNQSAFVKDRLLIENVLLATEIVKDYHKDSVSSRCALKIDISKAFDSVQWKFLIN 502

Query: 194  VLHIFGFHPLFTNLVMNNMKGSWFSVLVNGNVSGFFQSTRELKQGDPLSPYLVLFCVDAL 15
            VL    F P FT+ +   +  + FSV VNG ++G F S REL+QG  LSPYL +  +D L
Sbjct: 503  VLEAMNFPPEFTHWITLCITTASFSVQVNGELAGVFSSARELRQGCSLSPYLFVISMDVL 562

Query: 14   SRGL 3
            S+ L
Sbjct: 563  SKML 566


>gb|AAD29058.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1229

 Score =  183 bits (465), Expect = 3e-44
 Identities = 97/241 (40%), Positives = 147/241 (60%), Gaps = 2/241 (0%)
 Frame = -1

Query: 728  VPTLLSSADNEKLVAPVSLQEVRDVIFLLDADSAPGPDGFSGQFYRTS*DIIAPNLLQAV 549
            +  ++S  DN+ L    + +EV+D +F ++A  APGPDGF+  FY +   II+ ++ + +
Sbjct: 307  IEPMVSQGDNDFLTRIPNDEEVKDAVFSINASKAPGPDGFTAGFYHSYWHIISTDVGREI 366

Query: 548  QEFFAGVPIPRSVASKLIVLLPKKDNPATYADFRPISLCNFLNKIFTCLMCRRLRDFLPS 369
            + FF     PR +    I L+PK   P   AD+RPI+LCN   KI   +M +R++  LP 
Sbjct: 367  RLFFTSKNFPRRMNETHIRLIPKDLGPRKVADYRPIALCNIFYKIVAKIMTKRMQLILPK 426

Query: 368  LISEEQAAFLKDREIADNVVLVQEILHHL-DKKVRRH-NVLFKLDMAKAFDQVCWPFLQK 195
            LISE Q+AF+  R I+DNV++  E+LH L     ++H ++  K DM+KA+D+V W FL+K
Sbjct: 427  LISENQSAFVPGRVISDNVLITHEVLHFLRTSSAKKHCSMAVKTDMSKAYDRVEWDFLKK 486

Query: 194  VLHIFGFHPLFTNLVMNNMKGSWFSVLVNGNVSGFFQSTRELKQGDPLSPYLVLFCVDAL 15
            VL  FGFH ++ + V+  +    +S L+NG   G    TR L+QGDPLSP L + C + L
Sbjct: 487  VLQRFGFHSIWIDWVLECVTSVSYSFLINGTPQGKVVPTRGLRQGDPLSPCLFILCTEVL 546

Query: 14   S 12
            S
Sbjct: 547  S 547


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score =  181 bits (459), Expect = 1e-43
 Identities = 94/244 (38%), Positives = 144/244 (59%)
 Frame = -1

Query: 734 DFVPTLLSSADNEKLVAPVSLQEVRDVIFLLDADSAPGPDGFSGQFYRTS*DIIAPNLLQ 555
           D +    +++DNE L   VS +E++ V+F +  D +PGPDG++ +FY+ + DII      
Sbjct: 82  DLLQFRCTNSDNEMLTREVSSEEIKTVLFSMPKDKSPGPDGYTSEFYKATWDIIGQEFTL 141

Query: 554 AVQEFFAGVPIPRSVASKLIVLLPKKDNPATYADFRPISLCNFLNKIFTCLMCRRLRDFL 375
            VQ FF    +P+ + S ++ L+PKK       D+RPIS CN L K+ + ++  RL+  L
Sbjct: 142 PVQSFFQKGFLPKGINSIILALIPKKLAAKEMRDYRPISCCNVLYKVISKIIANRLKLLL 201

Query: 374 PSLISEEQAAFLKDREIADNVVLVQEILHHLDKKVRRHNVLFKLDMAKAFDQVCWPFLQK 195
           P  I+E Q+AF+KDR + +N++L  E++    K         K+D++KAFD V W FL  
Sbjct: 202 PRFIAENQSAFVKDRLLIENLLLATELVKDYHKDSISARCAIKIDISKAFDSVQWSFLTN 261

Query: 194 VLHIFGFHPLFTNLVMNNMKGSWFSVLVNGNVSGFFQSTRELKQGDPLSPYLVLFCVDAL 15
            L    F P F + +   +  + FSV VNG++ G+FQS R L+QG  LSPYL + C+D L
Sbjct: 262 TLVAMNFSPTFIHWINLCITTASFSVQVNGDLVGYFQSKRGLRQGCSLSPYLFVICMDVL 321

Query: 14  SRGL 3
           S+ L
Sbjct: 322 SKML 325