BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00021848
         (502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB09815.1| non-LTR retroelement reverse transcriptase-like ...   115   5e-24
gb|AAD22368.1| putative non-LTR retroelement reverse transcripta...   112   4e-23
gb|AAF23831.1|AC007234_3 F1E22.12 [Arabidopsis thaliana]              108   3e-22
sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H pr...   108   3e-22
gb|AAF19536.1|AC007190_4 F23N19.5 [Arabidopsis thaliana]              108   6e-22

>dbj|BAB09815.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
           thaliana]
          Length = 676

 Score =  115 bits (287), Expect = 5e-24
 Identities = 60/156 (38%), Positives = 89/156 (57%), Gaps = 1/156 (0%)
 Frame = -3

Query: 500 RRPSQGWVKLNSDGARDIDTGWASAGRVIRDQSGRWICGYGRSIGRCSVLQAELWGCMDG 321
           R+P++GWV +N+DGA   + G A+AG VIRD+ G W+ G+  +IG CS   AELWG   G
Sbjct: 509 RKPAEGWVTMNTDGASHGNPGQATAGGVIRDEHGSWLVGFALNIGVCSAPLAELWGVYYG 568

Query: 320 LSIVCEKGYRRVEIELDNEEAVRLINRENEDGATCA-ITRKIQQYCRRDWSYKCRHIFRE 144
           L +  E+G+RRV +E+D+   V  +     D    A + R    +  +DW  +  H++RE
Sbjct: 569 LVVAWERGWRRVRLEVDSALVVGFLQSGIGDSHPLAFLVRLCHGFISKDWIVRITHVYRE 628

Query: 143 ANRVADSLAKSSRDLDSCLTVWESPPAQVIGLLAHD 36
           ANR+AD LA  +  L     + +S P  V  +L  D
Sbjct: 629 ANRLADGLANYAFTLPFGFLLLDSCPEHVSSILLED 664


>gb|AAD22368.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 321

 Score =  112 bits (279), Expect = 4e-23
 Identities = 63/156 (40%), Positives = 88/156 (56%), Gaps = 1/156 (0%)
 Frame = -3

Query: 494 PSQGWVKLNSDGARDIDTGWASAGRVIRDQSGRWICGYGRSIGRCSVLQAELWGCMDGLS 315
           P  GWVKLN+DGA   + G+A+AG V+RD +G WI G+  +IG CS   AELWG   GL 
Sbjct: 156 PEDGWVKLNTDGASRGNPGFATAGGVLRDHNGAWIGGFAVNIGVCSAPLAELWGVYYGLF 215

Query: 314 IVCEKGYRRVEIELDNEEAVRLINRENEDGATCA-ITRKIQQYCRRDWSYKCRHIFREAN 138
           I   +G RRVE+E+D++  V  +     D    + + R    +  + W  +  H++REAN
Sbjct: 216 IAWGRGARRVELEVDSKMVVGFLTTGIADSHPLSFLLRLCYDFLSKGWIVRISHVYREAN 275

Query: 137 RVADSLAKSSRDLDSCLTVWESPPAQVIGLLAHDRA 30
           R+AD LA  +  L   L + ES P  V  +L  D A
Sbjct: 276 RLADGLANYAFSLSLGLHLLESRPDVVSSILLDDVA 311


>gb|AAF23831.1|AC007234_3 F1E22.12 [Arabidopsis thaliana]
          Length = 1055

 Score =  108 bits (271), Expect = 3e-22
 Identities = 61/154 (39%), Positives = 85/154 (55%), Gaps = 1/154 (0%)
 Frame = -3

Query: 494  PSQGWVKLNSDGARDIDTGWASAGRVIRDQSGRWICGYGRSIGRCSVLQAELWGCMDGLS 315
            P  GWVK+N+DGA   + G ASAG V+RD +G W  G+  +IGRCS  QAELWG   GL 
Sbjct: 564  PCVGWVKVNTDGASRGNPGLASAGGVLRDCTGAWCGGFSLNIGRCSAPQAELWGVYYGLY 623

Query: 314  IVCEKGYRRVEIELDNEEAVRLINRENEDGATCA-ITRKIQQYCRRDWSYKCRHIFREAN 138
               EK   RVE+E+D+E  V  +     D    + + R    + ++DW  +  H++REAN
Sbjct: 624  FAWEKKVPRVELEVDSEVIVGFLKTGISDSHPLSFLVRLCHGFLQKDWLVRIVHVYREAN 683

Query: 137  RVADSLAKSSRDLDSCLTVWESPPAQVIGLLAHD 36
            R+AD LA  +  L      ++  P  +  LL  D
Sbjct: 684  RLADGLANYAFSLSLGFHSFDLVPDAMSSLLRED 717


>sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H protein At1g65750
          Length = 620

 Score =  108 bits (271), Expect = 3e-22
 Identities = 61/154 (39%), Positives = 85/154 (55%), Gaps = 1/154 (0%)
 Frame = -3

Query: 494 PSQGWVKLNSDGARDIDTGWASAGRVIRDQSGRWICGYGRSIGRCSVLQAELWGCMDGLS 315
           P  GWVK+N+DGA   + G ASAG V+RD +G W  G+  +IGRCS  QAELWG   GL 
Sbjct: 455 PCVGWVKVNTDGASRGNPGLASAGGVLRDCTGAWCGGFSLNIGRCSAPQAELWGVYYGLY 514

Query: 314 IVCEKGYRRVEIELDNEEAVRLINRENEDGATCA-ITRKIQQYCRRDWSYKCRHIFREAN 138
              EK   RVE+E+D+E  V  +     D    + + R    + ++DW  +  H++REAN
Sbjct: 515 FAWEKKVPRVELEVDSEVIVGFLKTGISDSHPLSFLVRLCHGFLQKDWLVRIVHVYREAN 574

Query: 137 RVADSLAKSSRDLDSCLTVWESPPAQVIGLLAHD 36
           R+AD LA  +  L      ++  P  +  LL  D
Sbjct: 575 RLADGLANYAFSLSLGFHSFDLVPDAMSSLLRED 608


>gb|AAF19536.1|AC007190_4 F23N19.5 [Arabidopsis thaliana]
          Length = 233

 Score =  108 bits (269), Expect = 6e-22
 Identities = 57/155 (36%), Positives = 84/155 (54%), Gaps = 1/155 (0%)
 Frame = -3

Query: 497 RPSQGWVKLNSDGARDIDTGWASAGRVIRDQSGRWICGYGRSIGRCSVLQAELWGCMDGL 318
           +PS GW KLN+DGA   + G A+AG  +R++ G W  G+  +IGRC    AELWG   GL
Sbjct: 67  KPSLGWCKLNTDGASHGNPGLATAGGALRNEYGEWCFGFALNIGRCLAPLAELWGVYYGL 126

Query: 317 SIVCEKGYRRVEIELDNEEAVRLINRE-NEDGATCAITRKIQQYCRRDWSYKCRHIFREA 141
            +  ++G  R+E+E+D+E  V  +            + R    +  RDW  +  H++REA
Sbjct: 127 FMAWDRGITRLELEVDSEMVVGFLRTGIGSSHPLSFLVRMCHGFLSRDWIVRIGHVYREA 186

Query: 140 NRVADSLAKSSRDLDSCLTVWESPPAQVIGLLAHD 36
           NR+AD LA  + DL      + SPP  +  +L  D
Sbjct: 187 NRLADGLANYAFDLPLGYHAFASPPNSLDSILRDD 221