BLASTX nr result

ID: Cephaelis21_contig00021843 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00021843
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283276.1| PREDICTED: ribosomal RNA large subunit methy...   151   5e-35
ref|XP_002316277.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-34
ref|XP_002531569.1| ftsj, putative [Ricinus communis] gi|2235287...   147   9e-34
ref|XP_002871589.1| hypothetical protein ARALYDRAFT_325857 [Arab...   147   1e-33
ref|NP_196887.1| FtsJ-like methyltransferase family protein [Ara...   145   3e-33

>ref|XP_002283276.1| PREDICTED: ribosomal RNA large subunit methyltransferase E [Vitis
           vinifera] gi|296086215|emb|CBI31656.3| unnamed protein
           product [Vitis vinifera]
          Length = 233

 Score =  151 bits (382), Expect = 5e-35
 Identities = 81/121 (66%), Positives = 85/121 (70%), Gaps = 33/121 (27%)
 Frame = +2

Query: 95  MSGAGSPDFFYREAQRLGYVARSAFKLLQMQEKYKLIKPGSSVLDLGCAPGAWLQVACQS 274
           MSGAG+PDFFYREAQRLGY ARSAFKLLQMQ++YKLIKPGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGTPDFFYREAQRLGYAARSAFKLLQMQKQYKLIKPGSSVLDLGCAPGAWLQVACQS 60

Query: 275 LGPLKNGGAVVGIDIKK---------------------------------NKGFSVILSD 355
           LGPLKNGG VVGID+KK                                  KGFSVILSD
Sbjct: 61  LGPLKNGGVVVGIDLKKVKVPSMHCDSRVKTVCADVMKLPKDEIRAFSPQRKGFSVILSD 120

Query: 356 M 358
           M
Sbjct: 121 M 121


>ref|XP_002316277.1| predicted protein [Populus trichocarpa] gi|222865317|gb|EEF02448.1|
           predicted protein [Populus trichocarpa]
          Length = 232

 Score =  150 bits (378), Expect = 1e-34
 Identities = 80/121 (66%), Positives = 86/121 (71%), Gaps = 33/121 (27%)
 Frame = +2

Query: 95  MSGAGSPDFFYREAQRLGYVARSAFKLLQMQEKYKLIKPGSSVLDLGCAPGAWLQVACQS 274
           MSGAG+PDFFYREAQRLGYVARSAFKLLQ+Q+K+KLI PGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGTPDFFYREAQRLGYVARSAFKLLQIQKKHKLIAPGSSVLDLGCAPGAWLQVACQS 60

Query: 275 LGPLKNGGAVVGIDIKK---------------------------------NKGFSVILSD 355
           LGPLKNGGAVVGID+KK                                  KGFSV+LSD
Sbjct: 61  LGPLKNGGAVVGIDLKKVKVPPLYCDSRVQTVCADVMKLPKNQVRALSPRQKGFSVVLSD 120

Query: 356 M 358
           M
Sbjct: 121 M 121


>ref|XP_002531569.1| ftsj, putative [Ricinus communis] gi|223528799|gb|EEF30805.1| ftsj,
           putative [Ricinus communis]
          Length = 228

 Score =  147 bits (371), Expect = 9e-34
 Identities = 78/121 (64%), Positives = 86/121 (71%), Gaps = 33/121 (27%)
 Frame = +2

Query: 95  MSGAGSPDFFYREAQRLGYVARSAFKLLQMQEKYKLIKPGSSVLDLGCAPGAWLQVACQS 274
           MSGAG+PDFFYREAQRLGYVARSAFKLLQ+Q+++KLI PGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKQHKLITPGSSVLDLGCAPGAWLQVACQS 60

Query: 275 LGPLKNGGAVVGIDIKK---------------------------------NKGFSVILSD 355
           LGPLKNGG+VVGID+KK                                  KGFSV+LSD
Sbjct: 61  LGPLKNGGSVVGIDLKKVKVPNPYCDARVKTVCADVMNLPRDQVRALSLQQKGFSVVLSD 120

Query: 356 M 358
           M
Sbjct: 121 M 121


>ref|XP_002871589.1| hypothetical protein ARALYDRAFT_325857 [Arabidopsis lyrata subsp.
           lyrata] gi|297317426|gb|EFH47848.1| hypothetical protein
           ARALYDRAFT_325857 [Arabidopsis lyrata subsp. lyrata]
          Length = 229

 Score =  147 bits (370), Expect = 1e-33
 Identities = 71/79 (89%), Positives = 76/79 (96%)
 Frame = +2

Query: 95  MSGAGSPDFFYREAQRLGYVARSAFKLLQMQEKYKLIKPGSSVLDLGCAPGAWLQVACQS 274
           MSGAG PDFFYREAQRLGYVARSAFKLLQ+Q++YKLIKPGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGVPDFFYREAQRLGYVARSAFKLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQS 60

Query: 275 LGPLKNGGAVVGIDIKKNK 331
           LGPLK+GG VVG+DIKK K
Sbjct: 61  LGPLKSGGIVVGMDIKKVK 79


>ref|NP_196887.1| FtsJ-like methyltransferase family protein [Arabidopsis thaliana]
           gi|5821280|dbj|BAA83750.1| FtsJ [Arabidopsis thaliana]
           gi|10177649|dbj|BAB11111.1| FtsJ [Arabidopsis thaliana]
           gi|332004564|gb|AED91947.1| FtsJ-like methyltransferase
           family protein [Arabidopsis thaliana]
          Length = 224

 Score =  145 bits (367), Expect = 3e-33
 Identities = 70/79 (88%), Positives = 76/79 (96%)
 Frame = +2

Query: 95  MSGAGSPDFFYREAQRLGYVARSAFKLLQMQEKYKLIKPGSSVLDLGCAPGAWLQVACQS 274
           MSGAG PDFFYREAQRLGYVARSAFKLLQ+Q++YKLIKPGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGVPDFFYREAQRLGYVARSAFKLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQS 60

Query: 275 LGPLKNGGAVVGIDIKKNK 331
           LGPL++GG VVG+DIKK K
Sbjct: 61  LGPLRSGGIVVGMDIKKVK 79


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