BLASTX nr result

ID: Cephaelis21_contig00021795 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00021795
         (836 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAQ24534.1| SWIb domain-containing protein [Solanum chacoense]     127   4e-27
ref|XP_003537709.1| PREDICTED: upstream activation factor subuni...   123   6e-26
ref|XP_003517103.1| PREDICTED: upstream activation factor subuni...   121   2e-25
ref|XP_002270166.1| PREDICTED: upstream activation factor subuni...   114   3e-23
ref|XP_003612482.1| Upstream activation factor subunit UAF30 [Me...   113   6e-23

>gb|AAQ24534.1| SWIb domain-containing protein [Solanum chacoense]
          Length = 148

 Score =  127 bits (318), Expect = 4e-27
 Identities = 67/123 (54%), Positives = 77/123 (62%)
 Frame = -2

Query: 679 RKDPAMATRVFGNCCRTLMEXXXXXXXXXXXXXXXXXXXXXXXXXXXKPLAVSPSLGKFL 500
           RK  A ++R+FGN CRTLM                            KP  +SP+L KF+
Sbjct: 24  RKTMASSSRIFGNYCRTLMAAAKTSAGKTPPATTTTAAGKGRSKGILKPQPISPALQKFV 83

Query: 499 GAPESSRNDAVKKVWDYIKSRNLQNPANKKEIFCDEKLKTIFEGKDKVGFTDIAKLLSKH 320
           G  E SR DAVKK+WDYIK+ NLQNPANKKEI CD+ LKTIF GKDKVGF +IAKLLS H
Sbjct: 84  GTSEISRTDAVKKIWDYIKTNNLQNPANKKEINCDDMLKTIFAGKDKVGFLEIAKLLSFH 143

Query: 319 FPK 311
           F K
Sbjct: 144 FQK 146


>ref|XP_003537709.1| PREDICTED: upstream activation factor subunit UAF30-like [Glycine
           max]
          Length = 132

 Score =  123 bits (308), Expect = 6e-26
 Identities = 60/72 (83%), Positives = 63/72 (87%)
 Frame = -2

Query: 526 VSPSLGKFLGAPESSRNDAVKKVWDYIKSRNLQNPANKKEIFCDEKLKTIFEGKDKVGFT 347
           VS  LG FLGAP+ SR DAVKKVW YIK +NLQNPANKKEIFCDEKLKTIFEGKDKVGFT
Sbjct: 59  VSSELGDFLGAPQVSRTDAVKKVWAYIKLQNLQNPANKKEIFCDEKLKTIFEGKDKVGFT 118

Query: 346 DIAKLLSKHFPK 311
           +IAKLLS HF K
Sbjct: 119 EIAKLLSSHFVK 130


>ref|XP_003517103.1| PREDICTED: upstream activation factor subunit UAF30-like [Glycine
           max]
          Length = 132

 Score =  121 bits (304), Expect = 2e-25
 Identities = 59/72 (81%), Positives = 63/72 (87%)
 Frame = -2

Query: 526 VSPSLGKFLGAPESSRNDAVKKVWDYIKSRNLQNPANKKEIFCDEKLKTIFEGKDKVGFT 347
           VS  LG FLGAP+ SR +AVKKVW YIK +NLQNPANKKEIFCDEKLKTIFEGKDKVGFT
Sbjct: 59  VSSELGDFLGAPQVSRTEAVKKVWAYIKLQNLQNPANKKEIFCDEKLKTIFEGKDKVGFT 118

Query: 346 DIAKLLSKHFPK 311
           +IAKLLS HF K
Sbjct: 119 EIAKLLSNHFVK 130


>ref|XP_002270166.1| PREDICTED: upstream activation factor subunit spp27 [Vitis
           vinifera] gi|147798865|emb|CAN68050.1| hypothetical
           protein VITISV_015104 [Vitis vinifera]
           gi|296090194|emb|CBI40013.3| unnamed protein product
           [Vitis vinifera]
          Length = 128

 Score =  114 bits (285), Expect = 3e-23
 Identities = 52/75 (69%), Positives = 63/75 (84%)
 Frame = -2

Query: 535 PLAVSPSLGKFLGAPESSRNDAVKKVWDYIKSRNLQNPANKKEIFCDEKLKTIFEGKDKV 356
           P+ VSP+L KFLG PE+SR +AVKK+W++IK  NLQNP NK+EI CDEKLK++FEGKDKV
Sbjct: 52  PVPVSPALRKFLGVPEASRAEAVKKIWEHIKLNNLQNPTNKREILCDEKLKSVFEGKDKV 111

Query: 355 GFTDIAKLLSKHFPK 311
           GF +I KLLS HF K
Sbjct: 112 GFLEIGKLLSHHFIK 126


>ref|XP_003612482.1| Upstream activation factor subunit UAF30 [Medicago truncatula]
           gi|355513817|gb|AES95440.1| Upstream activation factor
           subunit UAF30 [Medicago truncatula]
           gi|388497934|gb|AFK37033.1| unknown [Medicago
           truncatula]
          Length = 134

 Score =  113 bits (282), Expect = 6e-23
 Identities = 53/72 (73%), Positives = 62/72 (86%)
 Frame = -2

Query: 526 VSPSLGKFLGAPESSRNDAVKKVWDYIKSRNLQNPANKKEIFCDEKLKTIFEGKDKVGFT 347
           V+  LG F+GAPE SR +AVKKVW+YIK +NLQNP NKKEIFCD+KLKTIF+GKDKV FT
Sbjct: 61  VTSELGNFIGAPEVSRTEAVKKVWEYIKLQNLQNPNNKKEIFCDDKLKTIFDGKDKVVFT 120

Query: 346 DIAKLLSKHFPK 311
           +IAKLL+ HF K
Sbjct: 121 EIAKLLATHFVK 132


Top