BLASTX nr result

ID: Cephaelis21_contig00021766 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00021766
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD56951.1|AF184886_1 LIM domain protein WLIM2 [Nicotiana tab...   100   2e-19
ref|XP_004138434.1| PREDICTED: pollen-specific protein SF3-like ...    99   5e-19
ref|XP_004167859.1| PREDICTED: LOW QUALITY PROTEIN: pollen-speci...    97   1e-18
ref|XP_004150238.1| PREDICTED: pollen-specific protein SF3-like ...    97   1e-18
gb|AAL38006.1|AF443117_1 LIM domain protein [Gossypium hirsutum]       96   3e-18

>gb|AAD56951.1|AF184886_1 LIM domain protein WLIM2 [Nicotiana tabacum]
           gi|1841464|emb|CAA71891.1| LIM-domain SF3 protein
           [Nicotiana tabacum]
          Length = 189

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 44/46 (95%), Positives = 46/46 (100%)
 Frame = -3

Query: 140 MSFIGTQQKCKACDKTVYPVELLSADGVSYHKSCFKCSHCKGTLKL 3
           MSFIGTQQKCKAC+KTVYPVELLSADGV+YHKSCFKCSHCKGTLKL
Sbjct: 1   MSFIGTQQKCKACEKTVYPVELLSADGVNYHKSCFKCSHCKGTLKL 46



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 22/37 (59%), Positives = 28/37 (75%)
 Frame = -3

Query: 134 FIGTQQKCKACDKTVYPVELLSADGVSYHKSCFKCSH 24
           F GTQ+KC  C KT YP+E ++ +  SYHK+CFKCSH
Sbjct: 101 FSGTQEKCATCGKTAYPLEKVTVENQSYHKTCFKCSH 137


>ref|XP_004138434.1| PREDICTED: pollen-specific protein SF3-like [Cucumis sativus]
           gi|449516649|ref|XP_004165359.1| PREDICTED:
           pollen-specific protein SF3-like [Cucumis sativus]
          Length = 189

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 44/46 (95%), Positives = 45/46 (97%)
 Frame = -3

Query: 140 MSFIGTQQKCKACDKTVYPVELLSADGVSYHKSCFKCSHCKGTLKL 3
           MSFIGTQQKCKAC+KTVYPVE LSADGVSYHKSCFKCSHCKGTLKL
Sbjct: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKL 46



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 24/37 (64%), Positives = 28/37 (75%)
 Frame = -3

Query: 134 FIGTQQKCKACDKTVYPVELLSADGVSYHKSCFKCSH 24
           F GTQ KC  C KTVYP+E ++ +  SYHKSCFKCSH
Sbjct: 101 FSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSH 137


>ref|XP_004167859.1| PREDICTED: LOW QUALITY PROTEIN: pollen-specific protein SF3-like
           [Cucumis sativus]
          Length = 195

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 43/46 (93%), Positives = 45/46 (97%)
 Frame = -3

Query: 140 MSFIGTQQKCKACDKTVYPVELLSADGVSYHKSCFKCSHCKGTLKL 3
           MSFIGTQQKCKACDKTVYPV+ LSADGVS+HKSCFKCSHCKGTLKL
Sbjct: 1   MSFIGTQQKCKACDKTVYPVDQLSADGVSFHKSCFKCSHCKGTLKL 46



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 22/37 (59%), Positives = 28/37 (75%)
 Frame = -3

Query: 134 FIGTQQKCKACDKTVYPVELLSADGVSYHKSCFKCSH 24
           F GTQ+KC  C KT YP+E ++ +  +YHKSCFKCSH
Sbjct: 101 FSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSH 137


>ref|XP_004150238.1| PREDICTED: pollen-specific protein SF3-like isoform 1 [Cucumis
           sativus] gi|449465045|ref|XP_004150239.1| PREDICTED:
           pollen-specific protein SF3-like isoform 2 [Cucumis
           sativus]
          Length = 195

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 43/46 (93%), Positives = 45/46 (97%)
 Frame = -3

Query: 140 MSFIGTQQKCKACDKTVYPVELLSADGVSYHKSCFKCSHCKGTLKL 3
           MSFIGTQQKCKACDKTVYPV+ LSADGVS+HKSCFKCSHCKGTLKL
Sbjct: 1   MSFIGTQQKCKACDKTVYPVDQLSADGVSFHKSCFKCSHCKGTLKL 46



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 22/37 (59%), Positives = 28/37 (75%)
 Frame = -3

Query: 134 FIGTQQKCKACDKTVYPVELLSADGVSYHKSCFKCSH 24
           F GTQ+KC  C KT YP+E ++ +  +YHKSCFKCSH
Sbjct: 101 FSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSH 137


>gb|AAL38006.1|AF443117_1 LIM domain protein [Gossypium hirsutum]
          Length = 189

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 43/46 (93%), Positives = 44/46 (95%)
 Frame = -3

Query: 140 MSFIGTQQKCKACDKTVYPVELLSADGVSYHKSCFKCSHCKGTLKL 3
           MSFIGTQQKCKAC+KTVYPVELLSADGV YHKSC KCSHCKGTLKL
Sbjct: 1   MSFIGTQQKCKACEKTVYPVELLSADGVPYHKSCSKCSHCKGTLKL 46



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 22/37 (59%), Positives = 27/37 (72%)
 Frame = -3

Query: 134 FIGTQQKCKACDKTVYPVELLSADGVSYHKSCFKCSH 24
           F GT +KC  C KT YP+E ++ +G SY KSCFKCSH
Sbjct: 101 FSGTVEKCATCGKTAYPLEKVTVEGQSYLKSCFKCSH 137


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