BLASTX nr result

ID: Cephaelis21_contig00021637 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00021637
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002333421.1| cc-nbs-lrr resistance protein [Populus trich...    62   4e-08
ref|XP_002304055.1| cc-nbs-lrr resistance protein [Populus trich...    58   9e-07
ref|XP_002333419.1| cc-nbs-lrr resistance protein [Populus trich...    56   3e-06
gb|ABI34374.1| Disease resistance protein I2C-5, putative [Solan...    56   3e-06
ref|XP_002333623.1| cc-nbs-lrr resistance protein [Populus trich...    55   6e-06

>ref|XP_002333421.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|105922514|gb|ABF81421.1| NBS-LRR type disease
           resistance protein [Populus trichocarpa]
           gi|222836549|gb|EEE74956.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 1177

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/63 (53%), Positives = 44/63 (69%), Gaps = 4/63 (6%)
 Frame = -3

Query: 178 PSTQADPNGQTDSVVDP--IVVGRTKDVFEIVKRLLSP--STEVVSVIPIVGMGGLGKTT 11
           P  + DP  QTDS++D   +VVGR  DVF++V+ L S   S  V+SV+ IVGM GLGKTT
Sbjct: 139 PEVRRDPRRQTDSILDSSAVVVGREDDVFQVVELLTSTTKSQHVLSVVSIVGMAGLGKTT 198

Query: 10  LAK 2
           +AK
Sbjct: 199 IAK 201


>ref|XP_002304055.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222841487|gb|EEE79034.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 1091

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 32/62 (51%), Positives = 44/62 (70%), Gaps = 3/62 (4%)
 Frame = -3

Query: 178 PSTQADPNGQTDSVVDP--IVVGRTKDVFEIVKRLL-SPSTEVVSVIPIVGMGGLGKTTL 8
           P    D   +TDS+++   +VVGR  DV ++VK L+ S   +V+SV+PIVGMGGLGKTT+
Sbjct: 148 PEVIRDIERETDSLLESSEVVVGREDDVSKVVKLLIGSTDQQVLSVVPIVGMGGLGKTTI 207

Query: 7   AK 2
           AK
Sbjct: 208 AK 209


>ref|XP_002333419.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222836547|gb|EEE74954.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 961

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 30/62 (48%), Positives = 45/62 (72%), Gaps = 3/62 (4%)
 Frame = -3

Query: 178 PSTQADPNGQTDSVVDP--IVVGRTKDVFEIVKRLL-SPSTEVVSVIPIVGMGGLGKTTL 8
           P    D + +TDS+++   +VVGR  DV++++K L+ S   +V+SV+PIVGM GLGKTT+
Sbjct: 148 PEVFRDIDRETDSLLESSEVVVGREDDVYKVMKLLIGSIGQQVLSVVPIVGMAGLGKTTI 207

Query: 7   AK 2
           AK
Sbjct: 208 AK 209


>gb|ABI34374.1| Disease resistance protein I2C-5, putative [Solanum demissum]
          Length = 1213

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
 Frame = -3

Query: 241 IYEEATNQYGLIQNFAPTLLTPSTQADPNGQTDSVVDPIVVGRTKDVFEIVKRLLSP--S 68
           + E+   + GL ++F  T L   T +     T  V D  + GR  D+ +++ RLLS   S
Sbjct: 198 VLEKQIGRLGLKEHFGSTKLETRTPS-----TSLVDDSDIFGRKNDIEDLIDRLLSEDAS 252

Query: 67  TEVVSVIPIVGMGGLGKTTLAK 2
            + ++V+PIVGMGGLGKTTLAK
Sbjct: 253 GKKLTVVPIVGMGGLGKTTLAK 274


>ref|XP_002333623.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222837867|gb|EEE76232.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 1186

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 31/62 (50%), Positives = 44/62 (70%), Gaps = 3/62 (4%)
 Frame = -3

Query: 178 PSTQADPNGQTDSVVDP--IVVGRTKDVFEIVKRLL-SPSTEVVSVIPIVGMGGLGKTTL 8
           P    D + QTDS+++   +VVGR  DV +++K L+ S   +V+SV+PIVGM GLGKTT+
Sbjct: 148 PEVIRDIDRQTDSLLESSEVVVGREDDVSKVMKLLIGSIGQQVLSVVPIVGMAGLGKTTI 207

Query: 7   AK 2
           AK
Sbjct: 208 AK 209


Top