BLASTX nr result

ID: Cephaelis21_contig00021590 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00021590
         (1397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274201.1| PREDICTED: protein SMG9 [Vitis vinifera] gi|...   239   e-116
ref|XP_002328983.1| predicted protein [Populus trichocarpa] gi|2...   224   e-105
ref|XP_003516730.1| PREDICTED: protein SMG9-like [Glycine max]        231   e-104
ref|XP_003538657.1| PREDICTED: protein SMG9-like [Glycine max]        234   e-101
ref|XP_003610849.1| Protein SMG9 [Medicago truncatula] gi|355512...   232   e-100

>ref|XP_002274201.1| PREDICTED: protein SMG9 [Vitis vinifera] gi|297737327|emb|CBI26528.3|
            unnamed protein product [Vitis vinifera]
          Length = 419

 Score =  239 bits (610), Expect(2) = e-116
 Identities = 116/150 (77%), Positives = 136/150 (90%)
 Frame = -1

Query: 1397 FLTDNTDFTVVGVIGLPGAGKSTIMNEIYGFDATSPGMLPPFPIESEETRALAKHCTLGI 1218
            FLTDNTDFTVVGVIG PG GKSTIMNE+YGFD +SPGMLPPF I+SE+ RA+A+HCT+GI
Sbjct: 85   FLTDNTDFTVVGVIGPPGVGKSTIMNELYGFDGSSPGMLPPFAIQSEDIRAMARHCTVGI 144

Query: 1217 EPRISSERIILLDTQPVYSPSVLAEMIRPDGSSTIPVLSGESLSAELAYEMMSIQESF*L 1038
            EPRIS+ER+ILLDTQPV+SPSVLAEM+RPDGSSTI VL GESLS+ELA+E+M IQ    L
Sbjct: 145  EPRISAERLILLDTQPVFSPSVLAEMMRPDGSSTISVLGGESLSSELAHELMGIQ----L 200

Query: 1037 GVFLASICHVILVVSEGVHDLSMWRLMSTV 948
            GV LASICH++LV+S+GVHD++MWRLM TV
Sbjct: 201  GVLLASICHILLVISDGVHDINMWRLMLTV 230



 Score =  208 bits (530), Expect(2) = e-116
 Identities = 113/226 (50%), Positives = 145/226 (64%), Gaps = 2/226 (0%)
 Frame = -3

Query: 870 VDLLKHGIPDPSSVALSHPQNSSLGSEKEIKDKILEVGKEYLATPVFVQTK*VSFAPILL 691
           VDLLKHGIPD SS+  SH QNS+LGS+KE KDK+LE G+EYLA P+FV TK         
Sbjct: 230 VDLLKHGIPDLSSLTPSHSQNSNLGSDKEGKDKVLEGGEEYLAAPIFVHTK--------- 280

Query: 690 PSCCTLTGKEFLRRRFFLGLVSYFVCRLRDQDITPQNYVQLKKALNTYFRSSSFKRFDCQ 511
                                      LRDQDITP+N+V L+KAL  +F SS+F +  C 
Sbjct: 281 ---------------------------LRDQDITPRNFVHLRKALAQFFSSSTFVKEKCG 313

Query: 510 NSSNEACCLAINPK--NEDTDSASLELFFVPSKNRDDSQQPCNESHISVLWKLRNQVLSM 337
           N++ E    ++ P   + D DS    LF VP K++ DS +   ES+ S+LWKLR+QVLSM
Sbjct: 314 NTTKEHLVSSVPPNMPSTDLDSTLPNLFLVPCKSKVDSPRAQYESYTSMLWKLRDQVLSM 373

Query: 336 SGSSFTRILSERDWLKNSAKVWDMIKNSSTVAEYCRTLQSSGMFRR 199
           +  SF R +SERDWL+NSAK+W+++KNS  +AEYC+TLQSSGMFRR
Sbjct: 374 NCPSFARTISERDWLRNSAKIWELVKNSPIIAEYCKTLQSSGMFRR 419


>ref|XP_002328983.1| predicted protein [Populus trichocarpa] gi|222839217|gb|EEE77568.1|
            predicted protein [Populus trichocarpa]
          Length = 408

 Score =  224 bits (571), Expect(2) = e-105
 Identities = 111/150 (74%), Positives = 133/150 (88%)
 Frame = -1

Query: 1397 FLTDNTDFTVVGVIGLPGAGKSTIMNEIYGFDATSPGMLPPFPIESEETRALAKHCTLGI 1218
            FLT+NTDFTVVG+IG PG GKSTI+NE+YGFD TSPGMLPPF ++SE+ RA+A+HC++GI
Sbjct: 75   FLTENTDFTVVGIIGPPGVGKSTILNELYGFDGTSPGMLPPFTVQSEDNRAMARHCSVGI 134

Query: 1217 EPRISSERIILLDTQPVYSPSVLAEMIRPDGSSTIPVLSGESLSAELAYEMMSIQESF*L 1038
            EPRIS+ER+ILLDTQPV+SPSVLAEM+RPDGSSTI VLSGE+LS ELA+E+ +IQ    L
Sbjct: 135  EPRISAERLILLDTQPVFSPSVLAEMMRPDGSSTISVLSGENLSTELAHELTAIQ----L 190

Query: 1037 GVFLASICHVILVVSEGVHDLSMWRLMSTV 948
            GV LASICHV+LVVS+GV+D SM  LM TV
Sbjct: 191  GVLLASICHVLLVVSDGVYDDSMRHLMLTV 220



 Score =  184 bits (467), Expect(2) = e-105
 Identities = 103/226 (45%), Positives = 140/226 (61%), Gaps = 2/226 (0%)
 Frame = -3

Query: 870 VDLLKHGIPDPSSVALSHPQNSSLGSEKEIKDKILEVGKEYLATPVFVQTK*VSFAPILL 691
           VDLLKHGIPDPSS+  ++ Q+S+ G+EKE KDK+ E  +EY+ATP+FV TK         
Sbjct: 220 VDLLKHGIPDPSSLNSAYLQSSNAGTEKENKDKVSEA-EEYMATPLFVHTK--------- 269

Query: 690 PSCCTLTGKEFLRRRFFLGLVSYFVCRLRDQDITPQNYVQLKKALNTYFRSSSFKRFDCQ 511
                                      L+D+D TP N+V+L+K L  YF SSSF +    
Sbjct: 270 ---------------------------LQDKDFTPCNFVELRKELAQYFSSSSFIKEKGG 302

Query: 510 NSSNEACCLAI--NPKNEDTDSASLELFFVPSKNRDDSQQPCNESHISVLWKLRNQVLSM 337
           +   E    ++  N  + D DS S+ LF +P K++DDS +   +S+IS LWKLR+QVLSM
Sbjct: 303 SMEKEQISYSVPSNSHDNDPDSKSINLFVIPLKDKDDSLKAQYKSYISALWKLRDQVLSM 362

Query: 336 SGSSFTRILSERDWLKNSAKVWDMIKNSSTVAEYCRTLQSSGMFRR 199
           +G SF R +SERDWLKNSAK+W+++K S+ +AEY + LQ SGMFRR
Sbjct: 363 NGLSFARTVSERDWLKNSAKIWELVKGSAIIAEYGQALQGSGMFRR 408


>ref|XP_003516730.1| PREDICTED: protein SMG9-like [Glycine max]
          Length = 392

 Score =  231 bits (590), Expect(2) = e-104
 Identities = 115/150 (76%), Positives = 134/150 (89%)
 Frame = -1

Query: 1397 FLTDNTDFTVVGVIGLPGAGKSTIMNEIYGFDATSPGMLPPFPIESEETRALAKHCTLGI 1218
            FLT+NTDFTV+GVIG PG GKSTIMNE+YGFD++SPGMLPPF I+SEETRA+A+HC+ GI
Sbjct: 67   FLTENTDFTVIGVIGPPGVGKSTIMNELYGFDSSSPGMLPPFAIQSEETRAMARHCSTGI 126

Query: 1217 EPRISSERIILLDTQPVYSPSVLAEMIRPDGSSTIPVLSGESLSAELAYEMMSIQESF*L 1038
            EPRIS+ERIILLDTQPV+S SVLAEM+RPDGSSTI VLSGE+LSAELA+E++ IQ    L
Sbjct: 127  EPRISTERIILLDTQPVFSASVLAEMMRPDGSSTISVLSGETLSAELAHELIGIQ----L 182

Query: 1037 GVFLASICHVILVVSEGVHDLSMWRLMSTV 948
             V LASICH++LVVSEGVHD S+W LM TV
Sbjct: 183  AVLLASICHILLVVSEGVHDDSLWHLMLTV 212



 Score =  174 bits (440), Expect(2) = e-104
 Identities = 102/224 (45%), Positives = 133/224 (59%)
 Frame = -3

Query: 870 VDLLKHGIPDPSSVALSHPQNSSLGSEKEIKDKILEVGKEYLATPVFVQTK*VSFAPILL 691
           VDLLKHGI DPS +  S  Q+SS G EK   DK+ E  +EY+ATPVFV TK         
Sbjct: 212 VDLLKHGISDPSLMTSSLSQSSSSGLEK---DKLPE-HEEYMATPVFVHTK--------- 258

Query: 690 PSCCTLTGKEFLRRRFFLGLVSYFVCRLRDQDITPQNYVQLKKALNTYFRSSSFKRFDCQ 511
                                      L+DQD TP N+VQL+KAL  YFR SSF R   Q
Sbjct: 259 ---------------------------LQDQDFTPSNFVQLRKALMQYFRPSSFVRE--Q 289

Query: 510 NSSNEACCLAINPKNEDTDSASLELFFVPSKNRDDSQQPCNESHISVLWKLRNQVLSMSG 331
           N   E    ++  +    DS  ++ + +P K +D++    +ES++S LWKLR+Q+LSM  
Sbjct: 290 NKPEEHVSSSL-VRGSQMDSNLIKFYAIPLKKKDENPSAQHESYVSALWKLRDQILSMKS 348

Query: 330 SSFTRILSERDWLKNSAKVWDMIKNSSTVAEYCRTLQSSGMFRR 199
            SFTR +SER+WLKNSAK+W+ +KNS+T+ EYCRTLQ SGM+RR
Sbjct: 349 PSFTRPVSEREWLKNSAKIWEQVKNSATILEYCRTLQHSGMYRR 392


>ref|XP_003538657.1| PREDICTED: protein SMG9-like [Glycine max]
          Length = 393

 Score =  234 bits (598), Expect(2) = e-101
 Identities = 116/150 (77%), Positives = 134/150 (89%)
 Frame = -1

Query: 1397 FLTDNTDFTVVGVIGLPGAGKSTIMNEIYGFDATSPGMLPPFPIESEETRALAKHCTLGI 1218
            FLT+NTDFTV+GVIG PG GKSTIMNEIYGFD+TSPGMLPPF I+SEETRA+A+HC+ GI
Sbjct: 67   FLTENTDFTVIGVIGSPGVGKSTIMNEIYGFDSTSPGMLPPFAIQSEETRAMARHCSTGI 126

Query: 1217 EPRISSERIILLDTQPVYSPSVLAEMIRPDGSSTIPVLSGESLSAELAYEMMSIQESF*L 1038
            EPRIS+ERIILLDTQPV+S SVL+EM+RPDGSSTI VLSGE+LSAELA+E++ IQ    L
Sbjct: 127  EPRISTERIILLDTQPVFSASVLSEMMRPDGSSTISVLSGETLSAELAHELLGIQ----L 182

Query: 1037 GVFLASICHVILVVSEGVHDLSMWRLMSTV 948
             V LASICH++LVVSEG+HD SMW LM TV
Sbjct: 183  AVLLASICHIVLVVSEGIHDDSMWHLMLTV 212



 Score =  163 bits (412), Expect(2) = e-101
 Identities = 99/225 (44%), Positives = 133/225 (59%), Gaps = 1/225 (0%)
 Frame = -3

Query: 870 VDLLKHGIPDPSSVALSHPQNSSLGSEKEIKDKILEVGKEYLATPVFVQTK*VSFAPILL 691
           VDLLKHGI DPS +  S  Q+SS G EK   DK+ E  +EY+ATPVFV TK         
Sbjct: 212 VDLLKHGISDPSLMT-SLSQSSSSGLEK---DKLPE-HEEYMATPVFVHTK--------- 257

Query: 690 PSCCTLTGKEFLRRRFFLGLVSYFVCRLRDQDITPQNYVQLKKALNTYFRSSSFKRFDCQ 511
                                      L+DQD TP N VQL+KAL  YFR S F R   +
Sbjct: 258 ---------------------------LQDQDFTPSNSVQLRKALMQYFRPSYFVREHTE 290

Query: 510 NSSNEACCLAINPKN-EDTDSASLELFFVPSKNRDDSQQPCNESHISVLWKLRNQVLSMS 334
           N   E   ++ +P +    DS  ++ + +P K +D++ +  +ES++S LWKLR+Q+LSM 
Sbjct: 291 NKPEEH--VSSSPVHGSQMDSNMIKFYAIPLKKKDENPRAQHESYVSALWKLRDQILSMK 348

Query: 333 GSSFTRILSERDWLKNSAKVWDMIKNSSTVAEYCRTLQSSGMFRR 199
             SFTR +SER+WLKNSAK+W+++K+S T+ EYCRTLQ SGM+ R
Sbjct: 349 SPSFTRPVSEREWLKNSAKIWELVKSSPTILEYCRTLQHSGMYGR 393


>ref|XP_003610849.1| Protein SMG9 [Medicago truncatula] gi|355512184|gb|AES93807.1|
            Protein SMG9 [Medicago truncatula]
          Length = 396

 Score =  232 bits (592), Expect(2) = e-100
 Identities = 113/150 (75%), Positives = 134/150 (89%)
 Frame = -1

Query: 1397 FLTDNTDFTVVGVIGLPGAGKSTIMNEIYGFDATSPGMLPPFPIESEETRALAKHCTLGI 1218
            FLT+NTDFTV+GVIG PG GKS+IMNE+YGFD+TSPGMLPPF I+SEE RA+A+HC+ GI
Sbjct: 69   FLTENTDFTVIGVIGSPGVGKSSIMNELYGFDSTSPGMLPPFTIQSEENRAMARHCSTGI 128

Query: 1217 EPRISSERIILLDTQPVYSPSVLAEMIRPDGSSTIPVLSGESLSAELAYEMMSIQESF*L 1038
            EPRIS+ERIILLDTQPV+S SVLAEM RPDGSSTI +L+GESLSAELA+++M IQ    L
Sbjct: 129  EPRISAERIILLDTQPVFSASVLAEMTRPDGSSTISLLNGESLSAELAHDLMGIQ----L 184

Query: 1037 GVFLASICHVILVVSEGVHDLSMWRLMSTV 948
             VFLAS+CH++LVVSEG+HD S+W LMSTV
Sbjct: 185  AVFLASVCHILLVVSEGIHDDSLWHLMSTV 214



 Score =  160 bits (406), Expect(2) = e-100
 Identities = 97/225 (43%), Positives = 132/225 (58%), Gaps = 1/225 (0%)
 Frame = -3

Query: 870 VDLLKHGIPDPSSVALSHPQNSSLGSEKEIKDKILEVGKEYLATPVFVQTK*VSFAPILL 691
           VDLLKHGI DPS +A S  QNSS G + +  +K+ E   EY+ATPVFV TK         
Sbjct: 214 VDLLKHGISDPSLLASSLSQNSSSGHDSD--NKVPEF--EYMATPVFVHTK--------- 260

Query: 690 PSCCTLTGKEFLRRRFFLGLVSYFVCRLRDQDITPQNYVQLKKALNTYFRSSSFKRFDC- 514
                                      L+DQ+ TP+N +QL+KAL  YF+ SSF   +  
Sbjct: 261 ---------------------------LQDQEFTPKNCLQLRKALMQYFKPSSFVGENTG 293

Query: 513 QNSSNEACCLAINPKNEDTDSASLELFFVPSKNRDDSQQPCNESHISVLWKLRNQVLSMS 334
           +  SN      ++    D+D+  L LF +P K ++++ +  +ES+IS LWKLR+Q+LSM 
Sbjct: 294 KKPSNHVPPSMVHGSPLDSDT--LNLFTIPFKKKEENPRAQHESYISALWKLRDQILSMK 351

Query: 333 GSSFTRILSERDWLKNSAKVWDMIKNSSTVAEYCRTLQSSGMFRR 199
             SF R +SER+WLKNSAK+W+ +K S T+ EYCRTLQ SGM+RR
Sbjct: 352 SPSFRRPVSEREWLKNSAKIWEQVKKSPTILEYCRTLQHSGMYRR 396


Top