BLASTX nr result

ID: Cephaelis21_contig00021585 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00021585
         (713 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324822.1| predicted protein [Populus trichocarpa] gi|2...   160   2e-37
ref|XP_002281624.2| PREDICTED: LOW QUALITY PROTEIN: DNA polymera...   159   4e-37
emb|CBI20904.3| unnamed protein product [Vitis vinifera]              159   4e-37
ref|XP_002869254.1| predicted protein [Arabidopsis lyrata subsp....   158   1e-36
ref|NP_001078482.1| DNA polymerase theta subunit [Arabidopsis th...   157   2e-36

>ref|XP_002324822.1| predicted protein [Populus trichocarpa] gi|222866256|gb|EEF03387.1|
           predicted protein [Populus trichocarpa]
          Length = 646

 Score =  160 bits (405), Expect = 2e-37
 Identities = 80/109 (73%), Positives = 93/109 (85%)
 Frame = -2

Query: 712 RQAVNSICQGSAADIIKIAMINLHSVISEDAGKACSSSELVEKFHILKGRCRILLQVHDE 533
           RQAVNSICQGSAAD+IKIAMIN+HS+I +  G+  SSS    KFH+LKG+CRILLQVHDE
Sbjct: 526 RQAVNSICQGSAADLIKIAMINIHSLIVDGVGRPESSSLHANKFHMLKGQCRILLQVHDE 585

Query: 532 LVMEADSSVIKETATLLRLSMESAASLLVPLHVKVKVGRTWGSMEPFQA 386
           LV+E D S+I E A LL++SME AASLLVPLHVK+KVGRTWGS+EPF A
Sbjct: 586 LVLEVDPSLINEAAVLLQMSMEDAASLLVPLHVKLKVGRTWGSLEPFLA 634


>ref|XP_002281624.2| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase theta-like [Vitis
            vinifera]
          Length = 2181

 Score =  159 bits (403), Expect = 4e-37
 Identities = 79/109 (72%), Positives = 94/109 (86%)
 Frame = -2

Query: 712  RQAVNSICQGSAADIIKIAMINLHSVISEDAGKACSSSELVEKFHILKGRCRILLQVHDE 533
            RQAVNSICQGSAADIIKIAMIN+HSVI+E   +  SS+EL  KFH+LKGRCRI+LQVHDE
Sbjct: 2059 RQAVNSICQGSAADIIKIAMINIHSVIAEGVDEPNSSTELPAKFHMLKGRCRIILQVHDE 2118

Query: 532  LVMEADSSVIKETATLLRLSMESAASLLVPLHVKVKVGRTWGSMEPFQA 386
            LV+E D SV+KE   LL+++ME++ SLLVPL VK+KVGRTWGS+EPF A
Sbjct: 2119 LVLEVDPSVMKEAGLLLKMTMENSTSLLVPLLVKLKVGRTWGSLEPFHA 2167


>emb|CBI20904.3| unnamed protein product [Vitis vinifera]
          Length = 2091

 Score =  159 bits (403), Expect = 4e-37
 Identities = 79/109 (72%), Positives = 94/109 (86%)
 Frame = -2

Query: 712  RQAVNSICQGSAADIIKIAMINLHSVISEDAGKACSSSELVEKFHILKGRCRILLQVHDE 533
            RQAVNSICQGSAADIIKIAMIN+HSVI+E   +  SS+EL  KFH+LKGRCRI+LQVHDE
Sbjct: 1969 RQAVNSICQGSAADIIKIAMINIHSVIAEGVDEPNSSTELPAKFHMLKGRCRIILQVHDE 2028

Query: 532  LVMEADSSVIKETATLLRLSMESAASLLVPLHVKVKVGRTWGSMEPFQA 386
            LV+E D SV+KE   LL+++ME++ SLLVPL VK+KVGRTWGS+EPF A
Sbjct: 2029 LVLEVDPSVMKEAGLLLKMTMENSTSLLVPLLVKLKVGRTWGSLEPFHA 2077


>ref|XP_002869254.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297315090|gb|EFH45513.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 2147

 Score =  158 bits (399), Expect = 1e-36
 Identities = 78/109 (71%), Positives = 91/109 (83%)
 Frame = -2

Query: 712  RQAVNSICQGSAADIIKIAMINLHSVISEDAGKACSSSELVEKFHILKGRCRILLQVHDE 533
            RQAVNS+CQGSAADIIKIAMIN++S I+ED     SSS    +FH+LKGRCRILLQVHDE
Sbjct: 2038 RQAVNSMCQGSAADIIKIAMINIYSAIAEDVDTTASSSSSETRFHMLKGRCRILLQVHDE 2097

Query: 532  LVMEADSSVIKETATLLRLSMESAASLLVPLHVKVKVGRTWGSMEPFQA 386
            LV+E D S +K  A LL+ SME+A SLLVPLHVK+KVG+TWGS+EPFQA
Sbjct: 2098 LVLEVDPSYVKVAAMLLQTSMENAVSLLVPLHVKLKVGKTWGSLEPFQA 2146


>ref|NP_001078482.1| DNA polymerase theta subunit [Arabidopsis thaliana]
            gi|62241195|dbj|BAD93700.1| helicase and polymerase
            containing protein TEBICHI [Arabidopsis thaliana]
            gi|332660705|gb|AEE86105.1| DNA polymerase theta subunit
            [Arabidopsis thaliana]
          Length = 2154

 Score =  157 bits (398), Expect = 2e-36
 Identities = 78/108 (72%), Positives = 91/108 (84%)
 Frame = -2

Query: 712  RQAVNSICQGSAADIIKIAMINLHSVISEDAGKACSSSELVEKFHILKGRCRILLQVHDE 533
            RQAVNS+CQGSAADIIKIAMIN++S I+ED   A SSS    +FH+LKGRCRILLQVHDE
Sbjct: 2045 RQAVNSMCQGSAADIIKIAMINIYSAIAEDVDTAASSSSSETRFHMLKGRCRILLQVHDE 2104

Query: 532  LVMEADSSVIKETATLLRLSMESAASLLVPLHVKVKVGRTWGSMEPFQ 389
            LV+E D S +K  A LL+ SME+A SLLVPLHVK+KVG+TWGS+EPFQ
Sbjct: 2105 LVLEVDPSYVKLAAMLLQTSMENAVSLLVPLHVKLKVGKTWGSLEPFQ 2152


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