BLASTX nr result

ID: Cephaelis21_contig00021542 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00021542
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316000.1| predicted protein [Populus trichocarpa] gi|2...   108   3e-22
ref|XP_002514579.1| pentatricopeptide repeat-containing protein,...   104   7e-21
ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pen...   103   2e-20
emb|CBI27406.3| unnamed protein product [Vitis vinifera]              103   2e-20
gb|AAF81289.1|AC027656_6 Contains similarity to a hypothetical p...    96   4e-18

>ref|XP_002316000.1| predicted protein [Populus trichocarpa] gi|222865040|gb|EEF02171.1|
           predicted protein [Populus trichocarpa]
          Length = 745

 Score =  108 bits (271), Expect = 3e-22
 Identities = 54/100 (54%), Positives = 70/100 (70%)
 Frame = -3

Query: 301 EMCLNQIVPNIFTHRSILLALSEKETIAEARKYFDILIEDCDLMTDISLCNIMIYGYAKL 122
           EMC N+I PN F H  IL  L EK  +++AR YFD LI   +L  D++L NIMI GY KL
Sbjct: 386 EMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMS-NLRPDVTLYNIMIDGYVKL 444

Query: 121 GYVNEAIHLYQLILEKGILPTVVTFNSLLYGFCKARRLTE 2
           G V EA+ LY+ + +K I P++VTFNSL+YGFCK R++ E
Sbjct: 445 GDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVE 484


>ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546183|gb|EEF47685.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 840

 Score =  104 bits (260), Expect = 7e-21
 Identities = 54/100 (54%), Positives = 70/100 (70%)
 Frame = -3

Query: 301 EMCLNQIVPNIFTHRSILLALSEKETIAEARKYFDILIEDCDLMTDISLCNIMIYGYAKL 122
           +MC N+I+PN   H +IL+ L EK  I++AR YFD LI   +L  DI L NIMI GY K 
Sbjct: 481 KMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITS-NLSLDIILYNIMIDGYIKR 539

Query: 121 GYVNEAIHLYQLILEKGILPTVVTFNSLLYGFCKARRLTE 2
           G   EA+ LY+ + EKGI PT+VTFNSL+YGFC  R+L++
Sbjct: 540 GNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQ 579


>ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Vitis
           vinifera]
          Length = 829

 Score =  103 bits (256), Expect = 2e-20
 Identities = 53/100 (53%), Positives = 69/100 (69%)
 Frame = -3

Query: 301 EMCLNQIVPNIFTHRSILLALSEKETIAEARKYFDILIEDCDLMTDISLCNIMIYGYAKL 122
           EMC  +I PN F   +I+  L EK  I+EA+ YFD + +  D+  +I L NIMI GYAKL
Sbjct: 470 EMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKS-DVAEEIILYNIMIDGYAKL 528

Query: 121 GYVNEAIHLYQLILEKGILPTVVTFNSLLYGFCKARRLTE 2
           G + EA+  Y+ I+EKGI PT+VTFNSL+YGFCK  +L E
Sbjct: 529 GNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAE 568


>emb|CBI27406.3| unnamed protein product [Vitis vinifera]
          Length = 821

 Score =  103 bits (256), Expect = 2e-20
 Identities = 53/100 (53%), Positives = 69/100 (69%)
 Frame = -3

Query: 301 EMCLNQIVPNIFTHRSILLALSEKETIAEARKYFDILIEDCDLMTDISLCNIMIYGYAKL 122
           EMC  +I PN F   +I+  L EK  I+EA+ YFD + +  D+  +I L NIMI GYAKL
Sbjct: 462 EMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKS-DVAEEIILYNIMIDGYAKL 520

Query: 121 GYVNEAIHLYQLILEKGILPTVVTFNSLLYGFCKARRLTE 2
           G + EA+  Y+ I+EKGI PT+VTFNSL+YGFCK  +L E
Sbjct: 521 GNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAE 560


>gb|AAF81289.1|AC027656_6 Contains similarity to a hypothetical protein F23N19.4 gi|6630464
           from Arabidopsis thaliana BAC F23N19 gb|AC007190. It
           contains a PPR repeat domain PF|01535 [Arabidopsis
           thaliana]
          Length = 797

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 47/100 (47%), Positives = 68/100 (68%)
 Frame = -3

Query: 301 EMCLNQIVPNIFTHRSILLALSEKETIAEARKYFDILIEDCDLMTDISLCNIMIYGYAKL 122
           EMC  +I+PN  TH ++LL L +K  + EAR   D LI   + + DI L NI+I GYAK 
Sbjct: 436 EMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETL-DIVLYNIVIDGYAKS 494

Query: 121 GYVNEAIHLYQLILEKGILPTVVTFNSLLYGFCKARRLTE 2
           G + EA+ L+++++E GI P+V TFNSL+YG+CK + + E
Sbjct: 495 GCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAE 534


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