BLASTX nr result

ID: Cephaelis21_contig00021525 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00021525
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34155.3| unnamed protein product [Vitis vinifera]              178   5e-43
ref|XP_002279923.1| PREDICTED: uncharacterized protein LOC100267...   178   5e-43
ref|XP_003520839.1| PREDICTED: uncharacterized protein LOC100797...   176   2e-42
ref|XP_002531290.1| protein with unknown function [Ricinus commu...   176   2e-42
ref|NP_187125.1| RNA polymerase II transcription mediator [Arabi...   174   5e-42

>emb|CBI34155.3| unnamed protein product [Vitis vinifera]
          Length = 1724

 Score =  178 bits (451), Expect = 5e-43
 Identities = 79/97 (81%), Positives = 89/97 (91%)
 Frame = -1

Query: 293  HNAVDFGLTVVLDPSHIPPVNAAGGAAWLPYCVSVRLRYSFGDNPNVSFLGMEGSHGGHA 114
            HN+VDFGLTVVLDP+HIP +NAAGGAAWLPYCVSVRLRYSFG+N  VSFLGMEGSHGG A
Sbjct: 1600 HNSVDFGLTVVLDPAHIPHINAAGGAAWLPYCVSVRLRYSFGENSTVSFLGMEGSHGGRA 1659

Query: 113  CWLRVDDWEKCKQRVFRTVEMNGTSAGDVNQGRLRVV 3
            CWLR+DDWEKCK RV RTVEM+G S GD++QGRL++V
Sbjct: 1660 CWLRIDDWEKCKHRVVRTVEMSGCSPGDMSQGRLKIV 1696


>ref|XP_002279923.1| PREDICTED: uncharacterized protein LOC100267561 [Vitis vinifera]
          Length = 1758

 Score =  178 bits (451), Expect = 5e-43
 Identities = 79/97 (81%), Positives = 89/97 (91%)
 Frame = -1

Query: 293  HNAVDFGLTVVLDPSHIPPVNAAGGAAWLPYCVSVRLRYSFGDNPNVSFLGMEGSHGGHA 114
            HN+VDFGLTVVLDP+HIP +NAAGGAAWLPYCVSVRLRYSFG+N  VSFLGMEGSHGG A
Sbjct: 1634 HNSVDFGLTVVLDPAHIPHINAAGGAAWLPYCVSVRLRYSFGENSTVSFLGMEGSHGGRA 1693

Query: 113  CWLRVDDWEKCKQRVFRTVEMNGTSAGDVNQGRLRVV 3
            CWLR+DDWEKCK RV RTVEM+G S GD++QGRL++V
Sbjct: 1694 CWLRIDDWEKCKHRVVRTVEMSGCSPGDMSQGRLKIV 1730


>ref|XP_003520839.1| PREDICTED: uncharacterized protein LOC100797588 [Glycine max]
          Length = 1813

 Score =  176 bits (446), Expect = 2e-42
 Identities = 79/97 (81%), Positives = 89/97 (91%)
 Frame = -1

Query: 293  HNAVDFGLTVVLDPSHIPPVNAAGGAAWLPYCVSVRLRYSFGDNPNVSFLGMEGSHGGHA 114
            HN+VDF LTVVLD +HIP VNAAGGAAWLPYCVSVRLRYSFG++PNVSF+GM GSHGG A
Sbjct: 1689 HNSVDFALTVVLDSAHIPHVNAAGGAAWLPYCVSVRLRYSFGESPNVSFIGMNGSHGGRA 1748

Query: 113  CWLRVDDWEKCKQRVFRTVEMNGTSAGDVNQGRLRVV 3
            CWLRVDDWEKCKQRV RTVE+NG SA DV+QGRL+++
Sbjct: 1749 CWLRVDDWEKCKQRVARTVEVNGNSAADVSQGRLKLI 1785


>ref|XP_002531290.1| protein with unknown function [Ricinus communis]
            gi|223529123|gb|EEF31103.1| protein with unknown function
            [Ricinus communis]
          Length = 1746

 Score =  176 bits (446), Expect = 2e-42
 Identities = 80/97 (82%), Positives = 89/97 (91%)
 Frame = -1

Query: 293  HNAVDFGLTVVLDPSHIPPVNAAGGAAWLPYCVSVRLRYSFGDNPNVSFLGMEGSHGGHA 114
            HN+VDF LTVVLDP+ IP VNAAGGAAWLPYCVSVRLRYSFG+N NV+FLGMEGSHGG A
Sbjct: 1623 HNSVDFALTVVLDPALIPHVNAAGGAAWLPYCVSVRLRYSFGENTNVTFLGMEGSHGGRA 1682

Query: 113  CWLRVDDWEKCKQRVFRTVEMNGTSAGDVNQGRLRVV 3
            CWLR+DDWEKCKQRV RTVE+NG++ GDV QGRLR+V
Sbjct: 1683 CWLRIDDWEKCKQRVIRTVEVNGSTTGDVAQGRLRMV 1719


>ref|NP_187125.1| RNA polymerase II transcription mediator [Arabidopsis thaliana]
            gi|75207288|sp|Q9SR02.1|MED14_ARATH RecName:
            Full=Mediator of RNA polymerase II transcription subunit
            14; AltName: Full=Protein STRUWWELPETER; Short=AtSWP
            gi|6175174|gb|AAF04900.1|AC011437_15 hypothetical protein
            [Arabidopsis thaliana]
            gi|20068999|gb|AAM09647.1|AF466359_1 SWP1 [Arabidopsis
            thaliana] gi|23898273|emb|CAD53582.1| struwwelpeter 1
            protein [Arabidopsis thaliana]
            gi|332640609|gb|AEE74130.1| RNA polymerase II
            transcription mediator [Arabidopsis thaliana]
          Length = 1703

 Score =  174 bits (442), Expect = 5e-42
 Identities = 77/97 (79%), Positives = 89/97 (91%)
 Frame = -1

Query: 293  HNAVDFGLTVVLDPSHIPPVNAAGGAAWLPYCVSVRLRYSFGDNPNVSFLGMEGSHGGHA 114
            HN VDF LTVVLDP HIP +NAAGGAAWLPYCVSVRLRY+FG+NP+V+FLGMEGSHGG A
Sbjct: 1575 HNTVDFALTVVLDPVHIPHINAAGGAAWLPYCVSVRLRYTFGENPSVTFLGMEGSHGGRA 1634

Query: 113  CWLRVDDWEKCKQRVFRTVEMNGTSAGDVNQGRLRVV 3
            CW RVDDWEKCKQRV RTVE+NG++AGD+ QG+L++V
Sbjct: 1635 CWQRVDDWEKCKQRVSRTVEVNGSAAGDLTQGKLKLV 1671


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