BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00021523
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD17398.1| putative non-LTR retroelement reverse transcripta...    64   1e-08
gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indi...    56   1e-08
gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza ...    56   1e-08
gb|AAD37019.2| putative non-LTR retrolelement reverse transcript...    54   2e-07
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    57   1e-06

>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1225

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 40/120 (33%), Positives = 63/120 (52%), Gaps = 2/120 (1%)
 Frame = -1

Query: 368 QKR*GFVEKRLDKFFCSPMWLLENSEVKVTHVLKQTSDYSMLLLDSNPTVKKTPQKFNFN 189
           +KR   ++ RLD+   +  W    S   V ++  + SD+  LL        +  + F F+
Sbjct: 192 RKRRDLIKCRLDRAMGNEEWHSIYSHTNVEYLQHRGSDHKPLLASIQNKPYRPYKHFIFD 251

Query: 188 QRWTSKTGFKKVIWDAYAF--QHEGSPMFKVQHKIKKCRVDILKWKNKSKTNSAKEIREI 15
           +RW +K GFK+ + + +AF  + EG P F+   KIK CR  I  WK  +KTN+ K I E+
Sbjct: 252 KRWINKPGFKESVQEGWAFPSRGEGVPFFQ---KIKNCRQTISIWKKSNKTNTEKLILEL 308


>gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group]
          Length = 1874

 Score = 56.2 bits (134), Expect(2) = 1e-08
 Identities = 29/117 (24%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
 Frame = -1

Query: 350 VEKRLDKFFCSPMWLLENSEVKVTHVLKQTSDYSMLLLDSNPTVKKTPQK-FNFNQRWTS 174
           V+ RLD+   SP W     +  +TH+   +SD++ LLL+   T    P K   + + W  
Sbjct: 147 VKVRLDRGVASPAWSSRFPQAVITHLTTPSSDHAPLLLEREETTLARPMKIMRYEEVWER 206

Query: 173 KTGFKKVIWDAYAFQHEGSPMFKVQHKIKKCRVDILKWKNKSKTNSAKEIREIK*KM 3
           ++   +VI +A+    + S +  +  K+K     ++ W      N  K+I++++ K+
Sbjct: 207 ESSLPEVIQEAWTMGADASTLGDINDKMKVTMTKLVSWSKDKIGNVRKKIKDLREKL 263



 Score = 27.3 bits (59), Expect(2) = 1e-08
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = -2

Query: 412 HDLGFQGRKWTWENNKKD 359
           HD+GFQG  WT+ N +++
Sbjct: 126 HDIGFQGAPWTFCNMQRE 143


>gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1833

 Score = 56.2 bits (134), Expect(2) = 1e-08
 Identities = 29/117 (24%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
 Frame = -1

Query: 350 VEKRLDKFFCSPMWLLENSEVKVTHVLKQTSDYSMLLLDSNPTVKKTPQK-FNFNQRWTS 174
           V+ RLD+   SP W     +  +TH+   +SD++ LLL+   T    P K   + + W  
Sbjct: 172 VKVRLDRGVASPAWSSRFPQAVITHLTTPSSDHAPLLLEREETTLARPMKIMRYEEVWER 231

Query: 173 KTGFKKVIWDAYAFQHEGSPMFKVQHKIKKCRVDILKWKNKSKTNSAKEIREIK*KM 3
           ++   +VI +A+    + S +  +  K+K     ++ W      N  K+I++++ K+
Sbjct: 232 ESSLPEVIQEAWTMGADASTLGDINDKMKVTMTKLVSWSKDKIGNVRKKIKDLREKL 288



 Score = 27.3 bits (59), Expect(2) = 1e-08
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = -2

Query: 412 HDLGFQGRKWTWENNKKD 359
           HD+GFQG  WT+ N +++
Sbjct: 151 HDIGFQGAPWTFCNMQRE 168


>gb|AAD37019.2| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 855

 Score = 54.3 bits (129), Expect(2) = 2e-07
 Identities = 32/117 (27%), Positives = 59/117 (50%), Gaps = 3/117 (2%)
 Frame = -1

Query: 353 FVEKRLDKFFCSPMWLLENSEVKVTHVLKQTSDYSMLLLDSNPTVKKTP--QKFNFNQRW 180
           FV KRLD+  C P   L+  E  VTH+    SD++ + +   P V+  P  + F F   W
Sbjct: 604 FVAKRLDRVLCRPQTRLKWQEASVTHLPFFASDHAPIYIQLEPEVRSNPLRRPFRFEAAW 663

Query: 179 TSKTGFKKVIWDAYAFQHEGS-PMFKVQHKIKKCRVDILKWKNKSKTNSAKEIREIK 12
            + +GFK ++  ++  + E    +  ++ K+KK   ++    N+ K +   EI+ ++
Sbjct: 664 LTHSGFKDLLQASWNTEGETPVALAALKSKLKKWNREVFGDVNRRKESLMNEIKVVQ 720



 Score = 25.4 bits (54), Expect(2) = 2e-07
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -2

Query: 409 DLGFQGRKWTWENNKKDKVLSKK 341
           D+GF+G K+TW+  + +     K
Sbjct: 585 DMGFKGNKFTWKRGRVESTFVAK 607


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1374

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 34/116 (29%), Positives = 63/116 (54%)
 Frame = -1

Query: 350 VEKRLDKFFCSPMWLLENSEVKVTHVLKQTSDYSMLLLDSNPTVKKTPQKFNFNQRWTSK 171
           V+ RLD+   +  W+    + K T++ K  SD+S L+ +      +    F +++RW  +
Sbjct: 190 VQCRLDRTVANQAWMELFPQAKATYLQKICSDHSPLINNLVGDNWRKWAGFKYDKRWVQR 249

Query: 170 TGFKKVIWDAYAFQHEGSPMFKVQHKIKKCRVDILKWKNKSKTNSAKEIREIK*KM 3
            GFK ++ + ++ Q   +    ++ KI  CR +I KWK  SK +SA  I+E++ K+
Sbjct: 250 EGFKDLLCNFWSQQSTKTNALMME-KIASCRREISKWKRVSKPSSAVRIQELQFKL 304