BLASTX nr result

ID: Cephaelis21_contig00021477 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00021477
         (1310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514651.1| replication factor A 1, rfa1, putative [Rici...   154   3e-44
ref|XP_002328669.1| predicted protein [Populus trichocarpa] gi|2...   149   1e-43
ref|XP_002866409.1| hypothetical protein ARALYDRAFT_496254 [Arab...   144   1e-41
dbj|BAF64713.1| 70 kDa subunit of replication protein A [Ipomoea...   148   9e-41
emb|CAN71402.1| hypothetical protein VITISV_006284 [Vitis vinifera]   142   1e-40

>ref|XP_002514651.1| replication factor A 1, rfa1, putative [Ricinus communis]
            gi|223546255|gb|EEF47757.1| replication factor A 1, rfa1,
            putative [Ricinus communis]
          Length = 622

 Score =  154 bits (388), Expect(2) = 3e-44
 Identities = 78/104 (75%), Positives = 90/104 (86%)
 Frame = +3

Query: 903  KKTVVVSLWNDLATSVGQELLDMADKSPVVVIKSLRVGDFQGVSLSALPKSMVAVNPDIP 1082
            KKTVVVSLWNDLAT VGQELLDMADKSPVV IK+L+VGDFQGVSLS L +S++ VNPD P
Sbjct: 348  KKTVVVSLWNDLATDVGQELLDMADKSPVVAIKALKVGDFQGVSLSTLGRSIIQVNPDTP 407

Query: 1083 EANKLRNRFDSEGKETSIASVGAGSSPSTKGGVWSMYSESLTKS 1214
            E+ KL++ FDSEGKETS+ASVGAG SPSTK G  SMYS+ ++ S
Sbjct: 408  ESKKLKSWFDSEGKETSLASVGAGLSPSTKSGGGSMYSDRVSIS 451



 Score = 52.8 bits (125), Expect(2) = 3e-44
 Identities = 24/36 (66%), Positives = 30/36 (83%)
 Frame = +2

Query: 1202 SDKVFLSHIINNPSLGEEKLAFFSIKAYASYIKADQ 1309
            SD+V +SHI +NPSLG +K AFFSI+AY S+IK DQ
Sbjct: 445  SDRVSISHITSNPSLGSDKPAFFSIRAYISFIKPDQ 480


>ref|XP_002328669.1| predicted protein [Populus trichocarpa] gi|222838845|gb|EEE77196.1|
            predicted protein [Populus trichocarpa]
          Length = 603

 Score =  149 bits (375), Expect(2) = 1e-43
 Identities = 77/104 (74%), Positives = 89/104 (85%)
 Frame = +3

Query: 903  KKTVVVSLWNDLATSVGQELLDMADKSPVVVIKSLRVGDFQGVSLSALPKSMVAVNPDIP 1082
            KKTVVVSLWN+LATSVGQEL D+ADKSPVV IKSL+VGDFQG+SLS L KS+V VNP I 
Sbjct: 329  KKTVVVSLWNELATSVGQELHDIADKSPVVAIKSLKVGDFQGISLSTLGKSIVQVNPVIA 388

Query: 1083 EANKLRNRFDSEGKETSIASVGAGSSPSTKGGVWSMYSESLTKS 1214
            E+ KLRN +DSEGKETS+ASVG+G SPSTK G  SMYS+ ++ S
Sbjct: 389  ESEKLRNWYDSEGKETSMASVGSGLSPSTKSGARSMYSDRVSLS 432



 Score = 55.5 bits (132), Expect(2) = 1e-43
 Identities = 26/36 (72%), Positives = 31/36 (86%)
 Frame = +2

Query: 1202 SDKVFLSHIINNPSLGEEKLAFFSIKAYASYIKADQ 1309
            SD+V LSHI +NPSLGE+K AFFSI+AY S+IK DQ
Sbjct: 426  SDRVSLSHITSNPSLGEDKPAFFSIRAYISFIKPDQ 461


>ref|XP_002866409.1| hypothetical protein ARALYDRAFT_496254 [Arabidopsis lyrata subsp.
            lyrata] gi|297312244|gb|EFH42668.1| hypothetical protein
            ARALYDRAFT_496254 [Arabidopsis lyrata subsp. lyrata]
          Length = 631

 Score =  144 bits (364), Expect(2) = 1e-41
 Identities = 71/104 (68%), Positives = 87/104 (83%)
 Frame = +3

Query: 903  KKTVVVSLWNDLATSVGQELLDMADKSPVVVIKSLRVGDFQGVSLSALPKSMVAVNPDIP 1082
            KKTVVVSLWNDLAT +GQELLDMADKSPVV IKSL+VGDFQGVSLS + +S V +NP+ P
Sbjct: 355  KKTVVVSLWNDLATGIGQELLDMADKSPVVAIKSLKVGDFQGVSLSTISRSNVVINPESP 414

Query: 1083 EANKLRNRFDSEGKETSIASVGAGSSPSTKGGVWSMYSESLTKS 1214
            EA KL++ FDSEGKE S++S+G+G SPS+K G  SMY++ +  S
Sbjct: 415  EAKKLKSWFDSEGKEISMSSIGSGMSPSSKNGSRSMYTDRVLLS 458



 Score = 52.8 bits (125), Expect(2) = 1e-41
 Identities = 24/36 (66%), Positives = 29/36 (80%)
 Frame = +2

Query: 1202 SDKVFLSHIINNPSLGEEKLAFFSIKAYASYIKADQ 1309
            +D+V LSHI +NPSLGEEK  FFS +AY S+IK DQ
Sbjct: 452  TDRVLLSHITSNPSLGEEKPVFFSTRAYISFIKPDQ 487


>dbj|BAF64713.1| 70 kDa subunit of replication protein A [Ipomoea nil]
          Length = 604

 Score =  148 bits (373), Expect(2) = 9e-41
 Identities = 72/102 (70%), Positives = 89/102 (87%)
 Frame = +3

Query: 903  KKTVVVSLWNDLATSVGQELLDMADKSPVVVIKSLRVGDFQGVSLSALPKSMVAVNPDIP 1082
            KKTVVVSLW+DLAT+VGQELLDMADKSPVV I+S++VGDFQG+SLSA+ +S V VNPD+P
Sbjct: 329  KKTVVVSLWSDLATNVGQELLDMADKSPVVAIRSVKVGDFQGLSLSAITRSTVLVNPDMP 388

Query: 1083 EANKLRNRFDSEGKETSIASVGAGSSPSTKGGVWSMYSESLT 1208
            EA KLR+ +D EGKETS+ SVG+G S S KG +WSMYS+ ++
Sbjct: 389  EAKKLRSWYDCEGKETSLTSVGSGLSSSAKGVLWSMYSDRVS 430



 Score = 46.6 bits (109), Expect(2) = 9e-41
 Identities = 22/36 (61%), Positives = 28/36 (77%)
 Frame = +2

Query: 1202 SDKVFLSHIINNPSLGEEKLAFFSIKAYASYIKADQ 1309
            SD+V L HI +NP+LGE+K  FFSIKA  S+IK +Q
Sbjct: 426  SDRVSLLHITSNPNLGEDKPVFFSIKANISFIKPEQ 461


>emb|CAN71402.1| hypothetical protein VITISV_006284 [Vitis vinifera]
          Length = 634

 Score =  142 bits (357), Expect(2) = 1e-40
 Identities = 72/104 (69%), Positives = 86/104 (82%)
 Frame = +3

Query: 903  KKTVVVSLWNDLATSVGQELLDMADKSPVVVIKSLRVGDFQGVSLSALPKSMVAVNPDIP 1082
            KKTVVVSLWND AT+VGQELLD ADK P+V IKSL+VGDFQGVSLS L KS+V VNPD P
Sbjct: 359  KKTVVVSLWNDHATNVGQELLDNADKFPIVAIKSLKVGDFQGVSLSTLSKSIVLVNPDTP 418

Query: 1083 EANKLRNRFDSEGKETSIASVGAGSSPSTKGGVWSMYSESLTKS 1214
            E+ KLR+ +DSEGK  S+AS+G+  SPS+KGGV SMY + ++ S
Sbjct: 419  ESKKLRSWYDSEGKGASMASIGSDISPSSKGGVXSMYYDRVSLS 462



 Score = 52.4 bits (124), Expect(2) = 1e-40
 Identities = 23/35 (65%), Positives = 30/35 (85%)
 Frame = +2

Query: 1205 DKVFLSHIINNPSLGEEKLAFFSIKAYASYIKADQ 1309
            D+V LSH+ +NPSLGE+K +FFSI+AY S+IK DQ
Sbjct: 457  DRVSLSHVTSNPSLGEDKPSFFSIRAYISFIKPDQ 491


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