BLASTX nr result

ID: Cephaelis21_contig00021311 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00021311
         (873 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32743.3| unnamed protein product [Vitis vinifera]              250   3e-64
ref|XP_002276355.1| PREDICTED: pentatricopeptide repeat-containi...   250   3e-64
ref|XP_004163187.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   232   7e-59
ref|XP_004149878.1| PREDICTED: pentatricopeptide repeat-containi...   232   7e-59
ref|XP_002881498.1| pentatricopeptide repeat-containing protein ...   226   7e-57

>emb|CBI32743.3| unnamed protein product [Vitis vinifera]
          Length = 772

 Score =  250 bits (638), Expect = 3e-64
 Identities = 131/220 (59%), Positives = 161/220 (73%), Gaps = 3/220 (1%)
 Frame = -3

Query: 700 MAYLAASKPSHFHPN-FSKISSTPHSLKSLFYFCXXXXXXXXXXXXXXPNANLQTYRNSA 524
           MAY++ +K   + P  F   +S P SL  +  F                ++ +     S 
Sbjct: 1   MAYISVTKLHQWKPRLFISGASNPSSLNFIQSFSSVDESISAGDLT---SSPIPETPVSG 57

Query: 523 NPTRPGPSDAGFA--TGHSRSSRGKNRNPEKLEDIICRMMANRAWTTRLQNSIRNLVPAF 350
           +P+ PG   A  A      R+ RGK RNPEK+EDIICRMMANRAWTTRLQNSIR+LVP F
Sbjct: 58  SPSEPGNLTAAEAGEKASPRTPRGKLRNPEKIEDIICRMMANRAWTTRLQNSIRSLVPQF 117

Query: 349 DHELVYNVLHGAKDADQALQFFRWVERSGLFKHNKETHMKIFDILGRASKLNHARCILLD 170
           DH LV+NVLHG++++D ALQFFRWVER+GLF+H+++TH+KI +ILGRASKLNHARCILLD
Sbjct: 118 DHSLVWNVLHGSRNSDHALQFFRWVERAGLFRHDRDTHLKIIEILGRASKLNHARCILLD 177

Query: 169 MPKKEVEWDEDMWVLLIDSYGSAGIVQESVKLFQKMRELG 50
           MPKK VEWDED++VLLIDSYG AGIVQESVK+FQKM+ELG
Sbjct: 178 MPKKGVEWDEDLFVLLIDSYGKAGIVQESVKVFQKMKELG 217


>ref|XP_002276355.1| PREDICTED: pentatricopeptide repeat-containing protein At2g37230
           [Vitis vinifera]
          Length = 763

 Score =  250 bits (638), Expect = 3e-64
 Identities = 131/220 (59%), Positives = 161/220 (73%), Gaps = 3/220 (1%)
 Frame = -3

Query: 700 MAYLAASKPSHFHPN-FSKISSTPHSLKSLFYFCXXXXXXXXXXXXXXPNANLQTYRNSA 524
           MAY++ +K   + P  F   +S P SL  +  F                ++ +     S 
Sbjct: 1   MAYISVTKLHQWKPRLFISGASNPSSLNFIQSFSSVDESISAGDLT---SSPIPETPVSG 57

Query: 523 NPTRPGPSDAGFA--TGHSRSSRGKNRNPEKLEDIICRMMANRAWTTRLQNSIRNLVPAF 350
           +P+ PG   A  A      R+ RGK RNPEK+EDIICRMMANRAWTTRLQNSIR+LVP F
Sbjct: 58  SPSEPGNLTAAEAGEKASPRTPRGKLRNPEKIEDIICRMMANRAWTTRLQNSIRSLVPQF 117

Query: 349 DHELVYNVLHGAKDADQALQFFRWVERSGLFKHNKETHMKIFDILGRASKLNHARCILLD 170
           DH LV+NVLHG++++D ALQFFRWVER+GLF+H+++TH+KI +ILGRASKLNHARCILLD
Sbjct: 118 DHSLVWNVLHGSRNSDHALQFFRWVERAGLFRHDRDTHLKIIEILGRASKLNHARCILLD 177

Query: 169 MPKKEVEWDEDMWVLLIDSYGSAGIVQESVKLFQKMRELG 50
           MPKK VEWDED++VLLIDSYG AGIVQESVK+FQKM+ELG
Sbjct: 178 MPKKGVEWDEDLFVLLIDSYGKAGIVQESVKVFQKMKELG 217


>ref|XP_004163187.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g37230-like [Cucumis sativus]
          Length = 760

 Score =  232 bits (592), Expect = 7e-59
 Identities = 122/219 (55%), Positives = 151/219 (68%), Gaps = 2/219 (0%)
 Frame = -3

Query: 700 MAYLAASKP--SHFHPNFSKISSTPHSLKSLFYFCXXXXXXXXXXXXXXPNANLQTYRNS 527
           MA+++ SK   +H+    S   S P +L SL +F               PN    +   +
Sbjct: 1   MAHISVSKLHFTHYRVLSSSSISKPTALNSLHFFSSTQEPISTATQNGSPNDPSASSDAA 60

Query: 526 ANPTRPGPSDAGFATGHSRSSRGKNRNPEKLEDIICRMMANRAWTTRLQNSIRNLVPAFD 347
              T    +  G      R  RG+ R+PEKLE IIC+MMANR WTTRLQNSIR+LVP FD
Sbjct: 61  LPQTGESAAVNGVQQVKGRIPRGRPRDPEKLEXIICKMMANREWTTRLQNSIRSLVPQFD 120

Query: 346 HELVYNVLHGAKDADQALQFFRWVERSGLFKHNKETHMKIFDILGRASKLNHARCILLDM 167
           H LVYNVLH AK ++ AL FFRWVER+GLF+H++ETH KI +ILGRASKLNHARCILLDM
Sbjct: 121 HNLVYNVLHAAKKSEHALNFFRWVERAGLFQHDRETHFKIIEILGRASKLNHARCILLDM 180

Query: 166 PKKEVEWDEDMWVLLIDSYGSAGIVQESVKLFQKMRELG 50
           P K V+WDED++V+LI+SYG AGIVQE+VK+FQKM+ELG
Sbjct: 181 PNKGVQWDEDLFVVLIESYGKAGIVQEAVKIFQKMKELG 219


>ref|XP_004149878.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37230-like [Cucumis sativus]
          Length = 760

 Score =  232 bits (592), Expect = 7e-59
 Identities = 122/219 (55%), Positives = 151/219 (68%), Gaps = 2/219 (0%)
 Frame = -3

Query: 700 MAYLAASKP--SHFHPNFSKISSTPHSLKSLFYFCXXXXXXXXXXXXXXPNANLQTYRNS 527
           MA+++ SK   +H+    S   S P +L SL +F               PN    +   +
Sbjct: 1   MAHISVSKLHFTHYRVLSSSSISKPTALNSLHFFSSTQEPISTATQNGSPNDPSASSDAA 60

Query: 526 ANPTRPGPSDAGFATGHSRSSRGKNRNPEKLEDIICRMMANRAWTTRLQNSIRNLVPAFD 347
              T    +  G      R  RG+ R+PEKLE IIC+MMANR WTTRLQNSIR+LVP FD
Sbjct: 61  LPQTGESAAVNGVQQVKGRIPRGRPRDPEKLEKIICKMMANREWTTRLQNSIRSLVPQFD 120

Query: 346 HELVYNVLHGAKDADQALQFFRWVERSGLFKHNKETHMKIFDILGRASKLNHARCILLDM 167
           H LVYNVLH AK ++ AL FFRWVER+GLF+H++ETH KI +ILGRASKLNHARCILLDM
Sbjct: 121 HNLVYNVLHAAKKSEHALNFFRWVERAGLFQHDRETHFKIIEILGRASKLNHARCILLDM 180

Query: 166 PKKEVEWDEDMWVLLIDSYGSAGIVQESVKLFQKMRELG 50
           P K V+WDED++V+LI+SYG AGIVQE+VK+FQKM+ELG
Sbjct: 181 PNKGVQWDEDLFVVLIESYGKAGIVQEAVKIFQKMKELG 219


>ref|XP_002881498.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297327337|gb|EFH57757.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 756

 Score =  226 bits (575), Expect = 7e-57
 Identities = 119/217 (54%), Positives = 142/217 (65%)
 Frame = -3

Query: 700 MAYLAASKPSHFHPNFSKISSTPHSLKSLFYFCXXXXXXXXXXXXXXPNANLQTYRNSAN 521
           MA+++ SKP  +        S P S  S F F                +AN +T    A 
Sbjct: 1   MAFISRSKP--YQSRARVYLSLPRSSDSSF-FSFPRLFSSIEETQTSGDANPETQSPDAK 57

Query: 520 PTRPGPSDAGFATGHSRSSRGKNRNPEKLEDIICRMMANRAWTTRLQNSIRNLVPAFDHE 341
           P               R  RGK +N EKLED ICRMM NRAWTTRLQNSIR+LVP +DH 
Sbjct: 58  PETKNLGSTETRPLRERFQRGKRQNHEKLEDTICRMMDNRAWTTRLQNSIRDLVPEWDHS 117

Query: 340 LVYNVLHGAKDADQALQFFRWVERSGLFKHNKETHMKIFDILGRASKLNHARCILLDMPK 161
           LVYNVLHGAK  + ALQFFRW ERSGL +H+++THMK+  +LG   KLNHARCILLDMP+
Sbjct: 118 LVYNVLHGAKKLEHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVQKLNHARCILLDMPE 177

Query: 160 KEVEWDEDMWVLLIDSYGSAGIVQESVKLFQKMRELG 50
           K V WDEDM+V+LI+SYG AGIVQESVK+FQKM++LG
Sbjct: 178 KGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLG 214