BLASTX nr result

ID: Cephaelis21_contig00021265 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00021265
         (616 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635162.1| PREDICTED: uncharacterized RNA-binding prote...    58   1e-06
emb|CBI24453.3| unnamed protein product [Vitis vinifera]               58   1e-06
emb|CAA70700.1| transformer-SR ribonucleoprotein [Nicotiana taba...    55   8e-06

>ref|XP_003635162.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like
           [Vitis vinifera]
          Length = 228

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 29/50 (58%), Positives = 34/50 (68%), Gaps = 9/50 (18%)
 Frame = -2

Query: 426 NRHYQHSNQAFM---------SRRTRARTPTPGHYLGLKSSRGEGYRGDR 304
           NR  +H NQ+ +         SRR RARTPTPGHYLGLK++R  GYRGDR
Sbjct: 114 NRCIKHLNQSVLEGRYITVEKSRRKRARTPTPGHYLGLKNTRDSGYRGDR 163


>emb|CBI24453.3| unnamed protein product [Vitis vinifera]
          Length = 260

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 29/50 (58%), Positives = 34/50 (68%), Gaps = 9/50 (18%)
 Frame = -2

Query: 426 NRHYQHSNQAFM---------SRRTRARTPTPGHYLGLKSSRGEGYRGDR 304
           NR  +H NQ+ +         SRR RARTPTPGHYLGLK++R  GYRGDR
Sbjct: 146 NRCIKHLNQSVLEGRYITVEKSRRKRARTPTPGHYLGLKNTRDSGYRGDR 195


>emb|CAA70700.1| transformer-SR ribonucleoprotein [Nicotiana tabacum]
          Length = 235

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 30/50 (60%), Positives = 35/50 (70%), Gaps = 9/50 (18%)
 Frame = -2

Query: 426 NRHYQHSNQAFM---------SRRTRARTPTPGHYLGLKSSRGEGYRGDR 304
           NR  +H NQ+ +         SRR RARTPTPGHYLGLK++RGEG RGDR
Sbjct: 121 NRCIKHLNQSVLEGRYITVEKSRRKRARTPTPGHYLGLKNARGEG-RGDR 169


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