BLASTX nr result

ID: Cephaelis21_contig00021201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00021201
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEV43360.1| RNA recognition motif protein 1 [Citrus sinensis]      126   2e-27
ref|XP_002270340.2| PREDICTED: uncharacterized protein LOC100232...   124   8e-27
gb|AAN77868.1| putative heterogeneous nuclear ribonucleoprotein ...   124   8e-27
ref|XP_002302501.1| predicted protein [Populus trichocarpa] gi|2...   123   1e-26
ref|XP_002526479.1| RNA binding protein, putative [Ricinus commu...   123   2e-26

>gb|AEV43360.1| RNA recognition motif protein 1 [Citrus sinensis]
          Length = 775

 Score =  126 bits (316), Expect = 2e-27
 Identities = 61/75 (81%), Positives = 67/75 (89%)
 Frame = +2

Query: 20  KVKTVFVDGLLASWDEDHVRKLLKNYGEVEKVELARNMPSAKRKDF*FVTFSTHEAAVTC 199
           +VKTVFVDGL ASWDED VR+LLKNYGE+ K+ELARNMPSAKRKDF FVTF TH+AAVTC
Sbjct: 372 QVKTVFVDGLPASWDEDRVRELLKNYGEITKIELARNMPSAKRKDFGFVTFDTHDAAVTC 431

Query: 200 TKSINNKELGE*DSK 244
            KSINN ELGE D+K
Sbjct: 432 AKSINNAELGEGDNK 446


>ref|XP_002270340.2| PREDICTED: uncharacterized protein LOC100232913 [Vitis vinifera]
           gi|297734640|emb|CBI16691.3| unnamed protein product
           [Vitis vinifera]
          Length = 812

 Score =  124 bits (311), Expect = 8e-27
 Identities = 59/75 (78%), Positives = 67/75 (89%)
 Frame = +2

Query: 20  KVKTVFVDGLLASWDEDHVRKLLKNYGEVEKVELARNMPSAKRKDF*FVTFSTHEAAVTC 199
           +VKTVF+DGL ASWDED VR+LLK YGE+EK+ELARNMPSAKRKDF FVTF TH+AAVTC
Sbjct: 407 QVKTVFIDGLPASWDEDRVRELLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVTC 466

Query: 200 TKSINNKELGE*DSK 244
            KSINN ELGE ++K
Sbjct: 467 AKSINNAELGEGENK 481


>gb|AAN77868.1| putative heterogeneous nuclear ribonucleoprotein [Vitis vinifera]
          Length = 342

 Score =  124 bits (311), Expect = 8e-27
 Identities = 59/75 (78%), Positives = 67/75 (89%)
 Frame = +2

Query: 20  KVKTVFVDGLLASWDEDHVRKLLKNYGEVEKVELARNMPSAKRKDF*FVTFSTHEAAVTC 199
           +VKTVF+DGL ASWDED VR+LLK YGE+EK+ELARNMPSAKRKDF FVTF TH+AAVTC
Sbjct: 206 QVKTVFIDGLPASWDEDRVRELLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVTC 265

Query: 200 TKSINNKELGE*DSK 244
            KSINN ELGE ++K
Sbjct: 266 AKSINNAELGEGENK 280


>ref|XP_002302501.1| predicted protein [Populus trichocarpa] gi|222844227|gb|EEE81774.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score =  123 bits (309), Expect = 1e-26
 Identities = 59/75 (78%), Positives = 66/75 (88%)
 Frame = +2

Query: 20  KVKTVFVDGLLASWDEDHVRKLLKNYGEVEKVELARNMPSAKRKDF*FVTFSTHEAAVTC 199
           +VKTVF+DGL ASWDED VR LLK YGE+EK+ELARNMPSA+RKDF FVTF TH+AAVTC
Sbjct: 207 QVKTVFIDGLPASWDEDRVRVLLKKYGEIEKIELARNMPSARRKDFGFVTFDTHDAAVTC 266

Query: 200 TKSINNKELGE*DSK 244
            KSINN ELGE D+K
Sbjct: 267 AKSINNAELGEGDNK 281


>ref|XP_002526479.1| RNA binding protein, putative [Ricinus communis]
           gi|223534154|gb|EEF35870.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 784

 Score =  123 bits (308), Expect = 2e-26
 Identities = 59/75 (78%), Positives = 67/75 (89%)
 Frame = +2

Query: 20  KVKTVFVDGLLASWDEDHVRKLLKNYGEVEKVELARNMPSAKRKDF*FVTFSTHEAAVTC 199
           +VKTVFVDGL ASWDED VR+LLK +GE+EK+ELARNMPSAKRKDF FVTF +H+AAVTC
Sbjct: 388 QVKTVFVDGLPASWDEDRVRELLKKFGEIEKIELARNMPSAKRKDFGFVTFDSHDAAVTC 447

Query: 200 TKSINNKELGE*DSK 244
            KSINN ELGE D+K
Sbjct: 448 AKSINNAELGEGDNK 462