BLASTX nr result

ID: Cephaelis21_contig00021172 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00021172
         (3108 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic ...   575   e-161
emb|CBI17056.3| unnamed protein product [Vitis vinifera]              575   e-161
ref|XP_002328167.1| predicted protein [Populus trichocarpa] gi|2...   549   e-153
ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, p...   540   e-151
ref|XP_003606227.1| DNA polymerase epsilon catalytic subunit A [...   528   e-147

>ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic subunit A [Vitis
            vinifera]
          Length = 2214

 Score =  575 bits (1482), Expect = e-161
 Identities = 285/409 (69%), Positives = 331/409 (80%)
 Frame = -1

Query: 3060 QVMQKVFALLMAELRKLGATIIFASFSKVIIDTGKSDIIAAKAYCDSLLRTLQTRDLFEW 2881
            +VMQKVFALL+AE RKLGATI+FA+FSKVIIDTGKSD+ AAKAYCDSLL+TLQTRDLFEW
Sbjct: 1819 KVMQKVFALLLAEFRKLGATIVFANFSKVIIDTGKSDLSAAKAYCDSLLKTLQTRDLFEW 1878

Query: 2880 IELEPLQFWHSFLFMDQYNYGGIQAKFQDGSLDDKVRPSNQSMHNESDVEIVSSWNIAEN 2701
            IE+EPL FWHS LFMDQYNYGG+QA+   GSL     P+++S+ +ES V+IVSSWNIAE 
Sbjct: 1879 IEIEPLHFWHSLLFMDQYNYGGVQARSHGGSLIGSSDPTSESIEDESQVDIVSSWNIAEQ 1938

Query: 2700 LSKLTQDHFILIVSEFLYIPWKFAQEQAANRAVLGDGDLCTPSITAAVAETFDLQMTEDL 2521
            L K  QDHF+LIVSEF+Y PWK+A+EQAANRA   +GD CTPSITAA AE F+  +TE L
Sbjct: 1939 LPKTIQDHFVLIVSEFMYTPWKYAREQAANRASARNGDSCTPSITAAAAEVFESHITEYL 1998

Query: 2520 RKKIRSYFTDKLLKIVCDPSLHMKGMSKFQESKNTMSGNSQPSEVVHLGDPALEFIKYVS 2341
            +++I SYF DKLL+IV D  LHMKGM++        S N Q     H GD ALEFIK+V 
Sbjct: 1999 KEQISSYFADKLLRIVRDTVLHMKGMNR--------SENDQ-----HTGDAALEFIKHVC 2045

Query: 2340 AVLALDQNVQHEVLIMRKNLLKFVRVREFAPEAEFCNQSPSFTLPNVICSYXXXXXXXXX 2161
            AVLALDQNVQH++L+MRKNLLK+V VREFAPEAEFC+   SF LPNVICSY         
Sbjct: 2046 AVLALDQNVQHDILVMRKNLLKYVHVREFAPEAEFCDPCQSFILPNVICSYCNDCRDLDL 2105

Query: 2160 XXXRTLLSQEWLCAVPHCGQPYDRELMENALLQIVRQRERLYHLQDLVCLKCSQVKAAHL 1981
                 LL+QEW CAVP CGQPYDRE+MENALLQIVRQRERLYH+QDLVCLKC+QVKAAHL
Sbjct: 2106 CRDSALLAQEWRCAVPQCGQPYDREVMENALLQIVRQRERLYHVQDLVCLKCNQVKAAHL 2165

Query: 1980 AEHCSCAGSFRCKEDALDFRNKMKVFFNIAQVQEFQLLQECTSWVLEVR 1834
            AE CSCAGSFRCKED  +F++KM+VF  IA +Q+FQLLQECTSW+LE+R
Sbjct: 2166 AEQCSCAGSFRCKEDVSEFQSKMQVFLKIAMLQKFQLLQECTSWILEIR 2214


>emb|CBI17056.3| unnamed protein product [Vitis vinifera]
          Length = 2723

 Score =  575 bits (1482), Expect = e-161
 Identities = 285/409 (69%), Positives = 331/409 (80%)
 Frame = -1

Query: 3060 QVMQKVFALLMAELRKLGATIIFASFSKVIIDTGKSDIIAAKAYCDSLLRTLQTRDLFEW 2881
            +VMQKVFALL+AE RKLGATI+FA+FSKVIIDTGKSD+ AAKAYCDSLL+TLQTRDLFEW
Sbjct: 2328 KVMQKVFALLLAEFRKLGATIVFANFSKVIIDTGKSDLSAAKAYCDSLLKTLQTRDLFEW 2387

Query: 2880 IELEPLQFWHSFLFMDQYNYGGIQAKFQDGSLDDKVRPSNQSMHNESDVEIVSSWNIAEN 2701
            IE+EPL FWHS LFMDQYNYGG+QA+   GSL     P+++S+ +ES V+IVSSWNIAE 
Sbjct: 2388 IEIEPLHFWHSLLFMDQYNYGGVQARSHGGSLIGSSDPTSESIEDESQVDIVSSWNIAEQ 2447

Query: 2700 LSKLTQDHFILIVSEFLYIPWKFAQEQAANRAVLGDGDLCTPSITAAVAETFDLQMTEDL 2521
            L K  QDHF+LIVSEF+Y PWK+A+EQAANRA   +GD CTPSITAA AE F+  +TE L
Sbjct: 2448 LPKTIQDHFVLIVSEFMYTPWKYAREQAANRASARNGDSCTPSITAAAAEVFESHITEYL 2507

Query: 2520 RKKIRSYFTDKLLKIVCDPSLHMKGMSKFQESKNTMSGNSQPSEVVHLGDPALEFIKYVS 2341
            +++I SYF DKLL+IV D  LHMKGM++        S N Q     H GD ALEFIK+V 
Sbjct: 2508 KEQISSYFADKLLRIVRDTVLHMKGMNR--------SENDQ-----HTGDAALEFIKHVC 2554

Query: 2340 AVLALDQNVQHEVLIMRKNLLKFVRVREFAPEAEFCNQSPSFTLPNVICSYXXXXXXXXX 2161
            AVLALDQNVQH++L+MRKNLLK+V VREFAPEAEFC+   SF LPNVICSY         
Sbjct: 2555 AVLALDQNVQHDILVMRKNLLKYVHVREFAPEAEFCDPCQSFILPNVICSYCNDCRDLDL 2614

Query: 2160 XXXRTLLSQEWLCAVPHCGQPYDRELMENALLQIVRQRERLYHLQDLVCLKCSQVKAAHL 1981
                 LL+QEW CAVP CGQPYDRE+MENALLQIVRQRERLYH+QDLVCLKC+QVKAAHL
Sbjct: 2615 CRDSALLAQEWRCAVPQCGQPYDREVMENALLQIVRQRERLYHVQDLVCLKCNQVKAAHL 2674

Query: 1980 AEHCSCAGSFRCKEDALDFRNKMKVFFNIAQVQEFQLLQECTSWVLEVR 1834
            AE CSCAGSFRCKED  +F++KM+VF  IA +Q+FQLLQECTSW+LE+R
Sbjct: 2675 AEQCSCAGSFRCKEDVSEFQSKMQVFLKIAMLQKFQLLQECTSWILEIR 2723


>ref|XP_002328167.1| predicted protein [Populus trichocarpa] gi|222837682|gb|EEE76047.1|
            predicted protein [Populus trichocarpa]
          Length = 2221

 Score =  549 bits (1414), Expect = e-153
 Identities = 272/408 (66%), Positives = 323/408 (79%)
 Frame = -1

Query: 3060 QVMQKVFALLMAELRKLGATIIFASFSKVIIDTGKSDIIAAKAYCDSLLRTLQTRDLFEW 2881
            +VMQKVFALL+AELRKLGATIIFA+FSKVIIDTGK ++ AAKAYCDS+L+TLQ R+LFEW
Sbjct: 1815 KVMQKVFALLLAELRKLGATIIFANFSKVIIDTGKFELTAAKAYCDSVLKTLQNRELFEW 1874

Query: 2880 IELEPLQFWHSFLFMDQYNYGGIQAKFQDGSLDDKVRPSNQSMHNESDVEIVSSWNIAEN 2701
            IELEPLQFWHS LFMDQYNYGGI A+  D S +D     + S   E  V+IVS+WNIAE 
Sbjct: 1875 IELEPLQFWHSLLFMDQYNYGGIPARPDDSSHNDL---HHHSPREEPKVDIVSNWNIAEY 1931

Query: 2700 LSKLTQDHFILIVSEFLYIPWKFAQEQAANRAVLGDGDLCTPSITAAVAETFDLQMTEDL 2521
            L K  QDHF+LIVSEF++IPW +AQ+QAA R  L DG+ CTPSIT   AE F+  M E +
Sbjct: 1932 LPKKIQDHFVLIVSEFMFIPWDYAQKQAATREALRDGNSCTPSITIVAAENFESHMVEYI 1991

Query: 2520 RKKIRSYFTDKLLKIVCDPSLHMKGMSKFQESKNTMSGNSQPSEVVHLGDPALEFIKYVS 2341
            + +I ++FTDKLL I  D  LHMKG++K +  +    G  QP+ + H GDPALEFIK+V 
Sbjct: 1992 KGQIGTHFTDKLLGIARDTVLHMKGINKSENGQQISLGIQQPAGMNHKGDPALEFIKHVC 2051

Query: 2340 AVLALDQNVQHEVLIMRKNLLKFVRVREFAPEAEFCNQSPSFTLPNVICSYXXXXXXXXX 2161
            AVLALDQ+VQHEVL+MRKNLLK+VRVREFAPEAEF +  PSF LPNVICSY         
Sbjct: 2052 AVLALDQHVQHEVLVMRKNLLKYVRVREFAPEAEFHDPCPSFILPNVICSYCNDCRDLDL 2111

Query: 2160 XXXRTLLSQEWLCAVPHCGQPYDRELMENALLQIVRQRERLYHLQDLVCLKCSQVKAAHL 1981
                 +L++EW CAVP CGQPYDRE+MENALLQIVRQRERLYHLQDLVCL+C+QVKAAHL
Sbjct: 2112 CRDSAVLAEEWRCAVPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCLRCNQVKAAHL 2171

Query: 1980 AEHCSCAGSFRCKEDALDFRNKMKVFFNIAQVQEFQLLQECTSWVLEV 1837
            +E CSCAGS+RC+ED  +FR KM++F N+A  Q+FQLLQECTSW+LEV
Sbjct: 2172 SEQCSCAGSYRCREDVSEFRRKMQIFLNVAIRQKFQLLQECTSWILEV 2219


>ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, putative [Ricinus
            communis] gi|223531477|gb|EEF33309.1| DNA polymerase
            epsilon, catalytic subunit, putative [Ricinus communis]
          Length = 2227

 Score =  540 bits (1392), Expect = e-151
 Identities = 274/408 (67%), Positives = 321/408 (78%)
 Frame = -1

Query: 3060 QVMQKVFALLMAELRKLGATIIFASFSKVIIDTGKSDIIAAKAYCDSLLRTLQTRDLFEW 2881
            +VMQKVFALL+AE RKLGATIIFA+FSKVIIDTGK  + AAKAYCDSLL+TLQTR+LFEW
Sbjct: 1822 KVMQKVFALLLAEFRKLGATIIFANFSKVIIDTGKFSLSAAKAYCDSLLKTLQTRELFEW 1881

Query: 2880 IELEPLQFWHSFLFMDQYNYGGIQAKFQDGSLDDKVRPSNQSMHNESDVEIVSSWNIAEN 2701
            IELEPLQFWHS LFMDQYNYGGI A+  D S  +       S   ES V+IVSSWNIAE 
Sbjct: 1882 IELEPLQFWHSLLFMDQYNYGGIPARADDISHSES--QGAHSQRQESQVDIVSSWNIAEY 1939

Query: 2700 LSKLTQDHFILIVSEFLYIPWKFAQEQAANRAVLGDGDLCTPSITAAVAETFDLQMTEDL 2521
            L K  QDHF+LIVSEF++IPW++AQ+Q AN+A L D   CTPSIT + AET++  + E L
Sbjct: 1940 LPKTIQDHFVLIVSEFMFIPWEYAQKQDANKASLQDVSSCTPSITISAAETYESHIVEYL 1999

Query: 2520 RKKIRSYFTDKLLKIVCDPSLHMKGMSKFQESKNTMSGNSQPSEVVHLGDPALEFIKYVS 2341
            + +I +YFTDKLL IV +  LHMKG++K  E+    SG  Q +  +H   PALEFIK+V 
Sbjct: 2000 KGQISTYFTDKLLGIVRETVLHMKGINK-SENDQPSSGFPQVAGNIHKRVPALEFIKHVC 2058

Query: 2340 AVLALDQNVQHEVLIMRKNLLKFVRVREFAPEAEFCNQSPSFTLPNVICSYXXXXXXXXX 2161
            AVLALD NVQHEVL+MRKNLLK+VRVREFAPEAEF +  PSF LPNVICSY         
Sbjct: 2059 AVLALDLNVQHEVLVMRKNLLKYVRVREFAPEAEFHDPCPSFVLPNVICSYCNDCRDLDL 2118

Query: 2160 XXXRTLLSQEWLCAVPHCGQPYDRELMENALLQIVRQRERLYHLQDLVCLKCSQVKAAHL 1981
                 LL+QEW CAVP CGQPYDRE MENALLQIVRQRERLYHLQDLVC++C+QVKAAHL
Sbjct: 2119 CRDTALLAQEWRCAVPQCGQPYDREGMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHL 2178

Query: 1980 AEHCSCAGSFRCKEDALDFRNKMKVFFNIAQVQEFQLLQECTSWVLEV 1837
            AE C+CAG++RCKED  +FR+KM++F N+A  Q+FQLLQECTSW+LEV
Sbjct: 2179 AEQCACAGAYRCKEDVSEFRSKMQIFLNVAISQKFQLLQECTSWILEV 2226


>ref|XP_003606227.1| DNA polymerase epsilon catalytic subunit A [Medicago truncatula]
            gi|355507282|gb|AES88424.1| DNA polymerase epsilon
            catalytic subunit A [Medicago truncatula]
          Length = 2248

 Score =  528 bits (1359), Expect = e-147
 Identities = 263/414 (63%), Positives = 323/414 (78%), Gaps = 5/414 (1%)
 Frame = -1

Query: 3060 QVMQKVFALLMAELRKLGATIIFASFSKVIIDTGKSDIIAAKAYCDSLLRTLQTR----- 2896
            +VMQKVFALL+AE RKLGATI+FA+FSK+IIDTGK D   AKAYCDSLLRT+Q+R     
Sbjct: 1845 KVMQKVFALLLAEFRKLGATIVFANFSKIIIDTGKYDFSTAKAYCDSLLRTIQSRLVFQK 1904

Query: 2895 DLFEWIELEPLQFWHSFLFMDQYNYGGIQAKFQDGSLDDKVRPSNQSMHNESDVEIVSSW 2716
            DLFEWIELEPLQFW S LFMDQYNYGGI AK            S+++M++ES V+I+SSW
Sbjct: 1905 DLFEWIELEPLQFWCSLLFMDQYNYGGIPAK------------SDEAMNDESQVDIISSW 1952

Query: 2715 NIAENLSKLTQDHFILIVSEFLYIPWKFAQEQAANRAVLGDGDLCTPSITAAVAETFDLQ 2536
            NIAE L K  QDH++ IVS+F+YIPW + ++QAA RA + +GD CTPSI    AE F+ +
Sbjct: 1953 NIAEYLPKKIQDHYVFIVSQFMYIPWNYTRKQAAIRASVQNGDSCTPSINIGAAEAFESE 2012

Query: 2535 MTEDLRKKIRSYFTDKLLKIVCDPSLHMKGMSKFQESKNTMSGNSQPSEVVHLGDPALEF 2356
            +TE ++++I SYFTDKLL +V D  LHMKGM + +  ++T SG  Q ++ +H GD ALEF
Sbjct: 2013 ITEYIKEQISSYFTDKLLGVVRDIVLHMKGMGRSESDQSTSSGLHQLTDDLHRGDAALEF 2072

Query: 2355 IKYVSAVLALDQNVQHEVLIMRKNLLKFVRVREFAPEAEFCNQSPSFTLPNVICSYXXXX 2176
            IK+V AVLALDQ+VQH+V +MRKNLLK+VRVREFAPEAEF +   SF LPNVICSY    
Sbjct: 2073 IKHVCAVLALDQSVQHDVHVMRKNLLKYVRVREFAPEAEFHDPCHSFILPNVICSYCNEC 2132

Query: 2175 XXXXXXXXRTLLSQEWLCAVPHCGQPYDRELMENALLQIVRQRERLYHLQDLVCLKCSQV 1996
                     TLL++EW CAVP CGQPYDRE+MENALLQI RQRER YHLQDLVC++C+QV
Sbjct: 2133 RDLDLCRDPTLLNEEWHCAVPQCGQPYDREVMENALLQIARQRERQYHLQDLVCVRCNQV 2192

Query: 1995 KAAHLAEHCSCAGSFRCKEDALDFRNKMKVFFNIAQVQEFQLLQECTSWVLEVR 1834
            KAAHLAE C+CAGSF+CKEDA +F  KM+V +NIA  Q+FQLLQECT+W+LE++
Sbjct: 2193 KAAHLAEQCACAGSFKCKEDATEFCKKMRVIYNIASRQKFQLLQECTAWMLELK 2246


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