BLASTX nr result

ID: Cephaelis21_contig00021129 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00021129
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324488.1| predicted protein [Populus trichocarpa] gi|2...   192   2e-47
ref|XP_002532409.1| Xylose isomerase, putative [Ricinus communis...   184   6e-45
emb|CBI17768.3| unnamed protein product [Vitis vinifera]              182   3e-44
ref|XP_002277520.2| PREDICTED: xylose isomerase-like [Vitis vini...   181   4e-44
emb|CAN65150.1| hypothetical protein VITISV_037086 [Vitis vinifera]   178   5e-43

>ref|XP_002324488.1| predicted protein [Populus trichocarpa] gi|222865922|gb|EEF03053.1|
           predicted protein [Populus trichocarpa]
          Length = 477

 Score =  192 bits (489), Expect = 2e-47
 Identities = 89/119 (74%), Positives = 96/119 (80%)
 Frame = +1

Query: 34  MEAGKFXXXXXXXXXIFKIVIASGPPTCPADGNSGCASDSGEWEGEFFPGIHKIKYEGPT 213
           M+ G+          I   V A+GPPTCPAD    C SDSGEWEGEFFPGI KIKYEGP+
Sbjct: 1   MKGGRILLLLVCSSVITLGVFAAGPPTCPADLGGKC-SDSGEWEGEFFPGIPKIKYEGPS 59

Query: 214 SKSHLAFKWYNAEEQILGKKMKDWMRFSVAFWHTFRGTGGDPFGAPTKAWPWEDGTNSL 390
           SK+ LAFKWYNAEE+ILGKKMKDWMRFS+AFWHTFRGTGGDPFGAPTK WPWEDGTNSL
Sbjct: 60  SKNPLAFKWYNAEEEILGKKMKDWMRFSIAFWHTFRGTGGDPFGAPTKYWPWEDGTNSL 118


>ref|XP_002532409.1| Xylose isomerase, putative [Ricinus communis]
           gi|223527883|gb|EEF29973.1| Xylose isomerase, putative
           [Ricinus communis]
          Length = 477

 Score =  184 bits (467), Expect = 6e-45
 Identities = 82/100 (82%), Positives = 90/100 (90%)
 Frame = +1

Query: 91  VIASGPPTCPADGNSGCASDSGEWEGEFFPGIHKIKYEGPTSKSHLAFKWYNAEEQILGK 270
           VIA+GPPTCPAD    CA DS EW+GEFFPGI KIKYEGP+SK+ LA+KWYNAEE+ILGK
Sbjct: 20  VIAAGPPTCPADLGGKCA-DSDEWKGEFFPGIPKIKYEGPSSKNPLAYKWYNAEEEILGK 78

Query: 271 KMKDWMRFSVAFWHTFRGTGGDPFGAPTKAWPWEDGTNSL 390
           KMKDWMRFS+AFWHTFRGTG DPFGAPTK WPWEDGT+SL
Sbjct: 79  KMKDWMRFSIAFWHTFRGTGADPFGAPTKYWPWEDGTDSL 118


>emb|CBI17768.3| unnamed protein product [Vitis vinifera]
          Length = 526

 Score =  182 bits (461), Expect = 3e-44
 Identities = 84/121 (69%), Positives = 93/121 (76%)
 Frame = +1

Query: 28  KMMEAGKFXXXXXXXXXIFKIVIASGPPTCPADGNSGCASDSGEWEGEFFPGIHKIKYEG 207
           + M AGK          +   VIAS P TCPAD  S     S EWEGEFFPGI KIKYEG
Sbjct: 47  RKMMAGKVFLFLLCLNVVSFAVIASSPQTCPADDVSSKCGASDEWEGEFFPGIPKIKYEG 106

Query: 208 PTSKSHLAFKWYNAEEQILGKKMKDWMRFSVAFWHTFRGTGGDPFGAPTKAWPWEDGTNS 387
           P+SK+ L++KWYNA+E+ILGKKMKDWMRFSVAFWHTFRGTGGDPFGAPTK WPWEDGT+S
Sbjct: 107 PSSKNPLSYKWYNADEEILGKKMKDWMRFSVAFWHTFRGTGGDPFGAPTKFWPWEDGTDS 166

Query: 388 L 390
           L
Sbjct: 167 L 167


>ref|XP_002277520.2| PREDICTED: xylose isomerase-like [Vitis vinifera]
          Length = 478

 Score =  181 bits (460), Expect = 4e-44
 Identities = 84/119 (70%), Positives = 92/119 (77%)
 Frame = +1

Query: 34  MEAGKFXXXXXXXXXIFKIVIASGPPTCPADGNSGCASDSGEWEGEFFPGIHKIKYEGPT 213
           M AGK          +   VIAS P TCPAD  S     S EWEGEFFPGI KIKYEGP+
Sbjct: 1   MMAGKVFLFLLCLNVVSFAVIASSPQTCPADDVSSKCGASDEWEGEFFPGIPKIKYEGPS 60

Query: 214 SKSHLAFKWYNAEEQILGKKMKDWMRFSVAFWHTFRGTGGDPFGAPTKAWPWEDGTNSL 390
           SK+ L++KWYNA+E+ILGKKMKDWMRFSVAFWHTFRGTGGDPFGAPTK WPWEDGT+SL
Sbjct: 61  SKNPLSYKWYNADEEILGKKMKDWMRFSVAFWHTFRGTGGDPFGAPTKFWPWEDGTDSL 119


>emb|CAN65150.1| hypothetical protein VITISV_037086 [Vitis vinifera]
          Length = 462

 Score =  178 bits (451), Expect = 5e-43
 Identities = 79/99 (79%), Positives = 86/99 (86%)
 Frame = +1

Query: 94  IASGPPTCPADGNSGCASDSGEWEGEFFPGIHKIKYEGPTSKSHLAFKWYNAEEQILGKK 273
           IAS P TCPAD  S     S EWEGEFFPGI KIKYEGP+SK+ L++KWYNA+E+ILGKK
Sbjct: 5   IASSPQTCPADDVSSKCGASDEWEGEFFPGIPKIKYEGPSSKNPLSYKWYNADEEILGKK 64

Query: 274 MKDWMRFSVAFWHTFRGTGGDPFGAPTKAWPWEDGTNSL 390
           MKDWMRFSVAFWHTFRGTGGDPFGAPTK WPWEDGT+SL
Sbjct: 65  MKDWMRFSVAFWHTFRGTGGDPFGAPTKFWPWEDGTDSL 103


Top