BLASTX nr result

ID: Cephaelis21_contig00021082 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00021082
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511699.1| pentatricopeptide repeat-containing protein,...   175   4e-42
ref|XP_002320719.1| predicted protein [Populus trichocarpa] gi|2...   174   5e-42
emb|CBI38872.3| unnamed protein product [Vitis vinifera]              173   1e-41
ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containi...   173   1e-41
emb|CAN72187.1| hypothetical protein VITISV_012899 [Vitis vinifera]   173   1e-41

>ref|XP_002511699.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548879|gb|EEF50368.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 474

 Score =  175 bits (443), Expect = 4e-42
 Identities = 85/154 (55%), Positives = 115/154 (74%), Gaps = 4/154 (2%)
 Frame = +3

Query: 12  QPW---ISVLDLSPQCRTQMDIDQIHAKLLTTGLIKNLELTRKLILKFSNSQHQPLVQFS 182
           QPW   +S L L  +C+T  DI+Q+HA+++TTG IKN  LT K+IL  S+S +  L +F+
Sbjct: 10  QPWNSPLSTLILVRKCKTASDINQVHARMITTGFIKNTSLTTKIILSLSSSPNVALHEFA 69

Query: 183 NYLFFSHHA-LSNSHSKADPFIWNSVIKSFSHGNDSEKALEVFVSMLENGVLVDKYSFSL 359
            Y FF+ HA +  +  K DPF+WN+VIK+ SHGND ++AL +F  ML+NGV VDK+S SL
Sbjct: 70  RYFFFTRHAYIIGAQEKEDPFLWNAVIKTHSHGNDPKQALIIFSLMLQNGVFVDKFSVSL 129

Query: 360 ALKACSKVGLVSYGMQLHGLLRKCQFGSDLFLEN 461
            LKACS++GLV  GMQ+HGLLRK +FGSD+FL+N
Sbjct: 130 VLKACSRLGLVKEGMQIHGLLRKLKFGSDVFLQN 163


>ref|XP_002320719.1| predicted protein [Populus trichocarpa] gi|222861492|gb|EEE99034.1|
           predicted protein [Populus trichocarpa]
          Length = 643

 Score =  174 bits (442), Expect = 5e-42
 Identities = 84/157 (53%), Positives = 112/157 (71%), Gaps = 7/157 (4%)
 Frame = +3

Query: 12  QPW---ISVLDLSPQCRTQMDIDQIHAKLLTTGLIKNLELTRKLILKFSNSQHQPLVQFS 182
           QPW   I  L L  +C+   DI+QIHA+LLTTG IKN  LT K+IL FS S H PL++F+
Sbjct: 10  QPWNSAIPTLVLLKKCKRLSDINQIHARLLTTGFIKNTFLTTKIILSFSTSLHAPLIEFA 69

Query: 183 NYLFFSHHALS----NSHSKADPFIWNSVIKSFSHGNDSEKALEVFVSMLENGVLVDKYS 350
            ++FF HHA          + DPF+WN++IK++SHG+D ++A+ +   MLENG   DK++
Sbjct: 70  RFIFFRHHAFEFDEKEEEEEKDPFLWNAIIKTYSHGHDPKEAMWLVSLMLENGAFADKFT 129

Query: 351 FSLALKACSKVGLVSYGMQLHGLLRKCQFGSDLFLEN 461
            SL LKACS+VGLV  GMQ+HGLL+K +FGSDLFL+N
Sbjct: 130 LSLVLKACSRVGLVKEGMQIHGLLKKLEFGSDLFLQN 166


>emb|CBI38872.3| unnamed protein product [Vitis vinifera]
          Length = 379

 Score =  173 bits (439), Expect = 1e-41
 Identities = 85/155 (54%), Positives = 113/155 (72%), Gaps = 4/155 (2%)
 Frame = +3

Query: 9   HQPWISV---LDLSPQCRTQMDIDQIHAKLLTTGLIKNLELTRKLILKFSNSQHQPLVQF 179
           +QPW S    L L P+ +T  D++QIH++L+TTG I N  LT ++IL FS+S H+PLV+F
Sbjct: 8   NQPWNSTHPTLILLPKSKTLHDVNQIHSRLITTGFINNPSLTTRIILNFSSSSHKPLVEF 67

Query: 180 SNYLFFSHHALSNSHSKAD-PFIWNSVIKSFSHGNDSEKALEVFVSMLENGVLVDKYSFS 356
           + YLF S H     H K D PF+WN++IKSFSHG D  +A  +F  MLENGV VDK+SFS
Sbjct: 68  ARYLFMSRH-FGRKHRKQDNPFLWNAIIKSFSHGEDPREAFVIFNLMLENGVCVDKFSFS 126

Query: 357 LALKACSKVGLVSYGMQLHGLLRKCQFGSDLFLEN 461
           L LKACS++GL+  GMQ+HGLL + + GSD+FL+N
Sbjct: 127 LVLKACSRLGLIKEGMQIHGLLGRMEIGSDVFLQN 161


>ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic-like [Vitis vinifera]
          Length = 635

 Score =  173 bits (439), Expect = 1e-41
 Identities = 85/155 (54%), Positives = 113/155 (72%), Gaps = 4/155 (2%)
 Frame = +3

Query: 9   HQPWISV---LDLSPQCRTQMDIDQIHAKLLTTGLIKNLELTRKLILKFSNSQHQPLVQF 179
           +QPW S    L L P+ +T  D++QIH++L+TTG I N  LT ++IL FS+S H+PLV+F
Sbjct: 8   NQPWNSTHPTLILLPKSKTLHDVNQIHSRLITTGFINNPSLTTRIILNFSSSSHKPLVEF 67

Query: 180 SNYLFFSHHALSNSHSKAD-PFIWNSVIKSFSHGNDSEKALEVFVSMLENGVLVDKYSFS 356
           + YLF S H     H K D PF+WN++IKSFSHG D  +A  +F  MLENGV VDK+SFS
Sbjct: 68  ARYLFMSRH-FGRKHRKQDNPFLWNAIIKSFSHGEDPREAFVIFNLMLENGVCVDKFSFS 126

Query: 357 LALKACSKVGLVSYGMQLHGLLRKCQFGSDLFLEN 461
           L LKACS++GL+  GMQ+HGLL + + GSD+FL+N
Sbjct: 127 LVLKACSRLGLIKEGMQIHGLLGRMEIGSDVFLQN 161


>emb|CAN72187.1| hypothetical protein VITISV_012899 [Vitis vinifera]
          Length = 690

 Score =  173 bits (439), Expect = 1e-41
 Identities = 85/155 (54%), Positives = 112/155 (72%), Gaps = 4/155 (2%)
 Frame = +3

Query: 9   HQPWISV---LDLSPQCRTQMDIDQIHAKLLTTGLIKNLELTRKLILKFSNSQHQPLVQF 179
           H+PW S    L L P+ +T  D++QIH++L+TTG I N  LT ++IL FS+S H+PLV+F
Sbjct: 64  HKPWNSTHPTLILLPKSKTLHDVNQIHSRLITTGFINNPSLTTRIILNFSSSSHKPLVEF 123

Query: 180 SNYLFFSHHALSNSHSKAD-PFIWNSVIKSFSHGNDSEKALEVFVSMLENGVLVDKYSFS 356
           + YLF S H     H K D PF+WN++IKSFSHG D  +A  +F  MLENGV VDK+SFS
Sbjct: 124 ARYLFMSRH-FGRKHRKQDNPFLWNAIIKSFSHGEDPXEAFXIFNLMLENGVCVDKFSFS 182

Query: 357 LALKACSKVGLVSYGMQLHGLLRKCQFGSDLFLEN 461
           L LKACS++GL+  GMQ+HGLL   + GSD+FL+N
Sbjct: 183 LVLKACSRLGLIKEGMQIHGLLGXMEIGSDVFLQN 217