BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00021067
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis ...    71   8e-11
gb|AAF23831.1|AC007234_3 F1E22.12 [Arabidopsis thaliana]               70   1e-10
sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H pr...    70   1e-10
gb|AAF19536.1|AC007190_4 F23N19.5 [Arabidopsis thaliana]               67   1e-09
ref|NP_680382.1| RNase H domain-containing protein [Arabidopsis ...    67   1e-09

>gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis cebennensis]
          Length = 799

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 37/91 (40%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
 Frame = -3

Query: 256 DEVKHAAERRDRDLQQSVNNGLSKQLEAK------WTKPAVGWVKLNTDRARNPDTG*AS 95
           D VK   +R    +Q  +  G S ++  +      W KPA GW+KLNTD A   + G A+
Sbjct: 591 DMVKFVRDRASEVIQAHLVEGNSGKIRGRIERMVSWVKPAEGWLKLNTDGASKGNPGLAT 650

Query: 94  SGGIIHDQSGQWICGYGRSIGRCSVIQAELW 2
           +GGI+  Q G WI G+  +IG CS   AELW
Sbjct: 651 AGGILRQQDGSWIGGFAVNIGICSAPLAELW 681


>gb|AAF23831.1|AC007234_3 F1E22.12 [Arabidopsis thaliana]
          Length = 1055

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 30/56 (53%), Positives = 38/56 (67%)
 Frame = -3

Query: 169 WTKPAVGWVKLNTDRARNPDTG*ASSGGIIHDQSGQWICGYGRSIGRCSVIQAELW 2
           W  P VGWVK+NTD A   + G AS+GG++ D +G W  G+  +IGRCS  QAELW
Sbjct: 561 WVSPCVGWVKVNTDGASRGNPGLASAGGVLRDCTGAWCGGFSLNIGRCSAPQAELW 616


>sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H protein At1g65750
          Length = 620

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 30/56 (53%), Positives = 38/56 (67%)
 Frame = -3

Query: 169 WTKPAVGWVKLNTDRARNPDTG*ASSGGIIHDQSGQWICGYGRSIGRCSVIQAELW 2
           W  P VGWVK+NTD A   + G AS+GG++ D +G W  G+  +IGRCS  QAELW
Sbjct: 452 WVSPCVGWVKVNTDGASRGNPGLASAGGVLRDCTGAWCGGFSLNIGRCSAPQAELW 507


>gb|AAF19536.1|AC007190_4 F23N19.5 [Arabidopsis thaliana]
          Length = 233

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 29/68 (42%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
 Frame = -3

Query: 202 NNGLSK-QLEAKWTKPAVGWVKLNTDRARNPDTG*ASSGGIIHDQSGQWICGYGRSIGRC 26
           NN  S+ + + +W+KP++GW KLNTD A + + G A++GG + ++ G+W  G+  +IGRC
Sbjct: 53  NNSRSRMERQVRWSKPSLGWCKLNTDGASHGNPGLATAGGALRNEYGEWCFGFALNIGRC 112

Query: 25  SVIQAELW 2
               AELW
Sbjct: 113 LAPLAELW 120


>ref|NP_680382.1| RNase H domain-containing protein [Arabidopsis thaliana]
           gi|332007502|gb|AED94885.1| RNase H domain-containing
           protein [Arabidopsis thaliana]
          Length = 258

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 29/56 (51%), Positives = 36/56 (64%)
 Frame = -3

Query: 169 WTKPAVGWVKLNTDRARNPDTG*ASSGGIIHDQSGQWICGYGRSIGRCSVIQAELW 2
           W  P VGWVK+NTD A   + G AS+GG++ D  G W  G+  +IGRCS   AELW
Sbjct: 140 WVLPCVGWVKVNTDGASRGNPGLASAGGVLRDCEGAWCGGFSLNIGRCSAQHAELW 195