BLASTX nr result

ID: Cephaelis21_contig00021057 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00021057
         (492 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306555.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_002302327.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06
emb|CAB10239.1| hypothetical protein [Arabidopsis thaliana] gi|7...    55   6e-06
ref|NP_567434.1| protein transport protein SFT1 [Arabidopsis tha...    55   8e-06
ref|XP_002870304.1| hypothetical protein ARALYDRAFT_355343 [Arab...    55   8e-06

>ref|XP_002306555.1| predicted protein [Populus trichocarpa] gi|222856004|gb|EEE93551.1|
           predicted protein [Populus trichocarpa]
          Length = 135

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 28/44 (63%), Positives = 34/44 (77%)
 Frame = +2

Query: 257 KEGLSTRQAGPSDEIQLKIDPIHGKIDKEITSILKKVRQLRNAS 388
           +EGLSTR    SDEIQL+IDPIHG +D EIT +  +VRQLRN +
Sbjct: 22  REGLSTRPMASSDEIQLRIDPIHGDLDDEITGLRSQVRQLRNVA 65


>ref|XP_002302327.1| predicted protein [Populus trichocarpa] gi|222844053|gb|EEE81600.1|
           predicted protein [Populus trichocarpa]
          Length = 122

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/44 (61%), Positives = 33/44 (75%)
 Frame = +2

Query: 257 KEGLSTRQAGPSDEIQLKIDPIHGKIDKEITSILKKVRQLRNAS 388
           +EGLSTR    SDEIQL+IDPIH  +D EIT +  +VRQLRN +
Sbjct: 9   REGLSTRPVASSDEIQLRIDPIHWDLDDEITGLRSQVRQLRNVA 52


>emb|CAB10239.1| hypothetical protein [Arabidopsis thaliana]
           gi|7268166|emb|CAB78502.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 590

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 29/61 (47%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
 Frame = +2

Query: 257 KEGLSTRQAGPSDEIQLKIDPIHGKIDKEITSILKKVRQLRNA-SFFSRNFLIFV*LSFL 433
           +EGLSTR A  S+EIQL+IDP+H  +D EIT +  +VRQL+N   F S +  +F+  S +
Sbjct: 24  REGLSTRNAAGSEEIQLRIDPMHSDLDDEITGLHGQVRQLKNPFGFESGSVYVFLFQSTM 83

Query: 434 V 436
           +
Sbjct: 84  I 84


>ref|NP_567434.1| protein transport protein SFT1 [Arabidopsis thaliana]
           gi|75248462|sp|Q8VXX9.1|BETL1_ARATH RecName:
           Full=Bet1-like protein At4g14600
           gi|18389246|gb|AAL67066.1| unknown protein [Arabidopsis
           thaliana] gi|20259643|gb|AAM14339.1| unknown protein
           [Arabidopsis thaliana] gi|21554084|gb|AAM63165.1|
           unknown [Arabidopsis thaliana]
           gi|26452326|dbj|BAC43249.1| unknown protein [Arabidopsis
           thaliana] gi|332658064|gb|AEE83464.1| protein transport
           protein SFT1 [Arabidopsis thaliana]
          Length = 137

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 29/58 (50%), Positives = 39/58 (67%), Gaps = 7/58 (12%)
 Frame = +2

Query: 257 KEGLSTRQAGPSDEIQLKIDPIHGKIDKEITSILKKVRQLRN-------ASFFSRNFL 409
           +EGLSTR A  S+EIQL+IDP+H  +D EIT +  +VRQL+N        + F R+FL
Sbjct: 24  REGLSTRNAAGSEEIQLRIDPMHSDLDDEITGLHGQVRQLKNIAQEIGSEAKFQRDFL 81


>ref|XP_002870304.1| hypothetical protein ARALYDRAFT_355343 [Arabidopsis lyrata subsp.
           lyrata] gi|297316140|gb|EFH46563.1| hypothetical protein
           ARALYDRAFT_355343 [Arabidopsis lyrata subsp. lyrata]
          Length = 726

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 29/58 (50%), Positives = 39/58 (67%), Gaps = 7/58 (12%)
 Frame = +2

Query: 257 KEGLSTRQAGPSDEIQLKIDPIHGKIDKEITSILKKVRQLRN-------ASFFSRNFL 409
           +EGLSTR A  S+EIQL+IDP+H  +D EIT +  +VRQL+N        + F R+FL
Sbjct: 613 REGLSTRNAAGSEEIQLRIDPMHSDLDDEITGLHGQVRQLKNIAQEIGSEAKFQRDFL 670


Top