BLASTX nr result

ID: Cephaelis21_contig00020915 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00020915
         (592 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331832.1| predicted protein [Populus trichocarpa] gi|2...   132   3e-29
ref|XP_002318357.1| predicted protein [Populus trichocarpa] gi|2...   132   4e-29
gb|ADN33898.1| ATP-dependent RNA helicase [Cucumis melo subsp. m...   129   5e-28
ref|XP_004139208.1| PREDICTED: uncharacterized protein LOC101216...   128   8e-28
ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor...   126   3e-27

>ref|XP_002331832.1| predicted protein [Populus trichocarpa] gi|222875070|gb|EEF12201.1|
           predicted protein [Populus trichocarpa]
          Length = 1171

 Score =  132 bits (333), Expect = 3e-29
 Identities = 64/81 (79%), Positives = 72/81 (88%)
 Frame = -1

Query: 475 ASMGDEGGGMEKLEYLSLVSKVCAELETHLGFEDKVLAEFIIEIGRNCEDVTEFDAKLKE 296
           A+  +   G++KLEYLSLVSKVC+ELETHLGF DK+LAEFI E+GR+CE V EFDAKLKE
Sbjct: 2   ATAAENDAGLKKLEYLSLVSKVCSELETHLGFGDKILAEFITELGRSCETVDEFDAKLKE 61

Query: 295 NGAEMPDYFVRTLLTIIHAIL 233
           NGAEMPDYFVRTLLTIIHAIL
Sbjct: 62  NGAEMPDYFVRTLLTIIHAIL 82


>ref|XP_002318357.1| predicted protein [Populus trichocarpa] gi|222859030|gb|EEE96577.1|
           predicted protein [Populus trichocarpa]
          Length = 1207

 Score =  132 bits (332), Expect = 4e-29
 Identities = 63/78 (80%), Positives = 71/78 (91%)
 Frame = -1

Query: 466 GDEGGGMEKLEYLSLVSKVCAELETHLGFEDKVLAEFIIEIGRNCEDVTEFDAKLKENGA 287
           G+   G++KLEYLSLVSKVC+ELETHLGF DK+LAEFI E+GR+C+ V EFDAKLKENGA
Sbjct: 5   GENDAGLKKLEYLSLVSKVCSELETHLGFGDKILAEFITELGRSCDTVDEFDAKLKENGA 64

Query: 286 EMPDYFVRTLLTIIHAIL 233
           EMPDYFVRTLLTIIHAIL
Sbjct: 65  EMPDYFVRTLLTIIHAIL 82


>gb|ADN33898.1| ATP-dependent RNA helicase [Cucumis melo subsp. melo]
          Length = 953

 Score =  129 bits (323), Expect = 5e-28
 Identities = 64/81 (79%), Positives = 71/81 (87%)
 Frame = -1

Query: 475 ASMGDEGGGMEKLEYLSLVSKVCAELETHLGFEDKVLAEFIIEIGRNCEDVTEFDAKLKE 296
           ASM +   G++KLEYLSLVSKVC+ELETHLGF DKVLAEFI E+GR+CE V EFDAKLKE
Sbjct: 3   ASMANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKLKE 62

Query: 295 NGAEMPDYFVRTLLTIIHAIL 233
           NGAEMPDYFVR+LL IIH IL
Sbjct: 63  NGAEMPDYFVRSLLRIIHLIL 83


>ref|XP_004139208.1| PREDICTED: uncharacterized protein LOC101216792 [Cucumis sativus]
          Length = 1218

 Score =  128 bits (321), Expect = 8e-28
 Identities = 63/83 (75%), Positives = 71/83 (85%)
 Frame = -1

Query: 481 ICASMGDEGGGMEKLEYLSLVSKVCAELETHLGFEDKVLAEFIIEIGRNCEDVTEFDAKL 302
           + ASM +   G++KLEYLSLVSKVC+ELETHLGF DKVLAEFI E+GR+CE V EFD KL
Sbjct: 1   MAASMANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCESVDEFDTKL 60

Query: 301 KENGAEMPDYFVRTLLTIIHAIL 233
           KENGAEMPDYFVR+LL IIH IL
Sbjct: 61  KENGAEMPDYFVRSLLRIIHLIL 83


>ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like [Vitis vinifera]
          Length = 1172

 Score =  126 bits (316), Expect = 3e-27
 Identities = 62/80 (77%), Positives = 69/80 (86%)
 Frame = -1

Query: 472 SMGDEGGGMEKLEYLSLVSKVCAELETHLGFEDKVLAEFIIEIGRNCEDVTEFDAKLKEN 293
           S+  +  G++KLEYLSLVSKVC ELETHLG  DKVLAEFI ++GR CE V EFD+KLKEN
Sbjct: 2   SVDAQNDGLKKLEYLSLVSKVCTELETHLGVGDKVLAEFITDMGRKCETVDEFDSKLKEN 61

Query: 292 GAEMPDYFVRTLLTIIHAIL 233
           GAEMPDYFVRTLLTIIHAIL
Sbjct: 62  GAEMPDYFVRTLLTIIHAIL 81


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