BLASTX nr result

ID: Cephaelis21_contig00020832 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00020832
         (200 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group]          60   2e-07
emb|CCI55401.1| PH01B015M02.2 [Phyllostachys edulis]                   60   2e-07
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc...    60   2e-07
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc...    60   2e-07
ref|NP_001174752.1| Os06g0316600 [Oryza sativa Japonica Group] g...    60   2e-07

>emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group]
          Length = 1007

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/47 (57%), Positives = 35/47 (74%)
 Frame = -1

Query: 200  YHFIRDTIAEKNVLIQKINTKDNPADIFTKVLPVYKFKLCLDLIGVV 60
            YHFIR  IAE +V + KI+T DNPAD+ TK +P  KF+LC  L+GV+
Sbjct: 960  YHFIRGVIAEGDVKVCKISTHDNPADMMTKPVPATKFELCSSLVGVI 1006


>emb|CCI55401.1| PH01B015M02.2 [Phyllostachys edulis]
          Length = 1655

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 25/46 (54%), Positives = 37/46 (80%)
 Frame = -1

Query: 200  YHFIRDTIAEKNVLIQKINTKDNPADIFTKVLPVYKFKLCLDLIGV 63
            YH+I+D I++ NV + KI+T DNPAD+ TK +P+ KF+LC +L+GV
Sbjct: 1608 YHYIQDVISQGNVKVCKISTYDNPADMMTKSVPITKFELCSNLVGV 1653


>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 25/47 (53%), Positives = 35/47 (74%)
 Frame = -1

Query: 200  YHFIRDTIAEKNVLIQKINTKDNPADIFTKVLPVYKFKLCLDLIGVV 60
            YHF+RD I E  + + KI+T DNPAD+ TK +PV KF+LC  L+G++
Sbjct: 1286 YHFVRDVIEEGKLKVCKISTHDNPADMMTKPIPVAKFELCSSLVGLI 1332


>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 25/47 (53%), Positives = 35/47 (74%)
 Frame = -1

Query: 200  YHFIRDTIAEKNVLIQKINTKDNPADIFTKVLPVYKFKLCLDLIGVV 60
            YHF+RD I E  + + KI+T DNPAD+ TK +PV KF+LC  L+G++
Sbjct: 1286 YHFVRDVIEEGKLKVCKISTHDNPADMMTKPIPVAKFELCSSLVGLI 1332


>ref|NP_001174752.1| Os06g0316600 [Oryza sativa Japonica Group]
           gi|255676990|dbj|BAH93480.1| Os06g0316600 [Oryza sativa
           Japonica Group]
          Length = 759

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 24/47 (51%), Positives = 36/47 (76%)
 Frame = -1

Query: 200 YHFIRDTIAEKNVLIQKINTKDNPADIFTKVLPVYKFKLCLDLIGVV 60
           YH++RD +A+  + + KI+T DNPAD+ TK +PV KF+LC  L+G+V
Sbjct: 712 YHYVRDVVAQGKLKVCKISTHDNPADMMTKPVPVAKFELCSSLVGIV 758


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