BLASTX nr result

ID: Cephaelis21_contig00020780 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00020780
         (527 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279844.1| PREDICTED: poly(A) polymerase [Vitis vinifer...   195   4e-48
emb|CAN79659.1| hypothetical protein VITISV_014509 [Vitis vinifera]   195   4e-48
ref|XP_002519259.1| poly(A) polymerase, putative [Ricinus commun...   165   4e-39
ref|NP_187308.3| poly(A) polymerase 3 [Arabidopsis thaliana] gi|...   147   7e-34
ref|XP_002311376.1| predicted protein [Populus trichocarpa] gi|2...   145   3e-33

>ref|XP_002279844.1| PREDICTED: poly(A) polymerase [Vitis vinifera]
           gi|296083219|emb|CBI22855.3| unnamed protein product
           [Vitis vinifera]
          Length = 563

 Score =  195 bits (495), Expect = 4e-48
 Identities = 99/152 (65%), Positives = 121/152 (79%), Gaps = 3/152 (1%)
 Frame = -1

Query: 449 LGYLNLS---VPQFCPVNPSLAGLIELGLNPDVLIKMEVQRSMSLLQFMADEGLVPSPEE 279
           +G +N S   VP F P +    G +   LNP VL++ME +RS+SLLQFM++EGL+PSPEE
Sbjct: 38  VGVINPSFGPVPPFDPASLPQPGFV---LNPAVLVRMEHRRSISLLQFMSNEGLIPSPEE 94

Query: 278 EIKRRNVIAKLKQIVIQWVKRVGYQCQLPKNRIRAASATILTFGSYGLGVHNSGSDIDAL 99
           E+KR+NVI KLK+IV+ WVKRV +Q Q PK +I   SATILT+GSYGLGVH   SDIDAL
Sbjct: 95  ELKRKNVIEKLKEIVLTWVKRVAWQRQRPKQQIAVTSATILTYGSYGLGVHGPESDIDAL 154

Query: 98  CVGPYFATMADDFFVVLRNMLASRPEVTEIHC 3
           CVGP+FA+MADDFF+VLRNML SRPEV+EIHC
Sbjct: 155 CVGPFFASMADDFFIVLRNMLESRPEVSEIHC 186


>emb|CAN79659.1| hypothetical protein VITISV_014509 [Vitis vinifera]
          Length = 604

 Score =  195 bits (495), Expect = 4e-48
 Identities = 99/152 (65%), Positives = 121/152 (79%), Gaps = 3/152 (1%)
 Frame = -1

Query: 449 LGYLNLS---VPQFCPVNPSLAGLIELGLNPDVLIKMEVQRSMSLLQFMADEGLVPSPEE 279
           +G +N S   VP F P +    G +   LNP VL++ME +RS+SLLQFM++EGL+PSPEE
Sbjct: 79  VGVINPSFGPVPPFDPASLPQPGFV---LNPAVLVRMEHRRSISLLQFMSNEGLIPSPEE 135

Query: 278 EIKRRNVIAKLKQIVIQWVKRVGYQCQLPKNRIRAASATILTFGSYGLGVHNSGSDIDAL 99
           E+KR+NVI KLK+IV+ WVKRV +Q Q PK +I   SATILT+GSYGLGVH   SDIDAL
Sbjct: 136 ELKRKNVIEKLKEIVLTWVKRVAWQRQRPKQQIAVTSATILTYGSYGLGVHGPESDIDAL 195

Query: 98  CVGPYFATMADDFFVVLRNMLASRPEVTEIHC 3
           CVGP+FA+MADDFF+VLRNML SRPEV+EIHC
Sbjct: 196 CVGPFFASMADDFFIVLRNMLESRPEVSEIHC 227


>ref|XP_002519259.1| poly(A) polymerase, putative [Ricinus communis]
           gi|223541574|gb|EEF43123.1| poly(A) polymerase, putative
           [Ricinus communis]
          Length = 492

 Score =  165 bits (417), Expect = 4e-39
 Identities = 77/116 (66%), Positives = 99/116 (85%)
 Frame = -1

Query: 350 MEVQRSMSLLQFMADEGLVPSPEEEIKRRNVIAKLKQIVIQWVKRVGYQCQLPKNRIRAA 171
           ME +RS+SLL+FMA+EGLVPSP EE KR+NVI  LKQIV+ W K+V +Q +LP+ +I + 
Sbjct: 1   MEEERSLSLLKFMANEGLVPSPREEEKRKNVILNLKQIVVAWAKKVAWQRRLPRLQIAST 60

Query: 170 SATILTFGSYGLGVHNSGSDIDALCVGPYFATMADDFFVVLRNMLASRPEVTEIHC 3
           +ATILT+GSYGLGV+   SDIDA+CVGP+FAT+A+DFF+VLRNML +RPEV+ IHC
Sbjct: 61  NATILTYGSYGLGVYGPESDIDAICVGPFFATLAEDFFIVLRNMLKNRPEVSNIHC 116


>ref|NP_187308.3| poly(A) polymerase 3 [Arabidopsis thaliana]
           gi|62320636|dbj|BAD95301.1| poly(A) polymerase
           [Arabidopsis thaliana] gi|332640894|gb|AEE74415.1|
           poly(A) polymerase 3 [Arabidopsis thaliana]
          Length = 507

 Score =  147 bits (372), Expect = 7e-34
 Identities = 68/113 (60%), Positives = 95/113 (84%)
 Frame = -1

Query: 341 QRSMSLLQFMADEGLVPSPEEEIKRRNVIAKLKQIVIQWVKRVGYQCQLPKNRIRAASAT 162
           + S+SL Q M +EGL+PS E+E+KRR VI +L++IV++WVK V +Q +LP+N+I A +AT
Sbjct: 16  ESSISLRQLMVNEGLIPSLEDEVKRRGVINQLRKIVVRWVKNVAWQHRLPQNQIDATNAT 75

Query: 161 ILTFGSYGLGVHNSGSDIDALCVGPYFATMADDFFVVLRNMLASRPEVTEIHC 3
           IL +GSYGLGV+ S SDIDALC+GP+FA++A+DFF+ LR+ML SR EV+E+HC
Sbjct: 76  ILPYGSYGLGVYGSESDIDALCIGPFFASIAEDFFISLRDMLKSRREVSELHC 128


>ref|XP_002311376.1| predicted protein [Populus trichocarpa] gi|222851196|gb|EEE88743.1|
           predicted protein [Populus trichocarpa]
          Length = 483

 Score =  145 bits (367), Expect = 3e-33
 Identities = 67/104 (64%), Positives = 85/104 (81%)
 Frame = -1

Query: 314 MADEGLVPSPEEEIKRRNVIAKLKQIVIQWVKRVGYQCQLPKNRIRAASATILTFGSYGL 135
           M +EGL PSPEE+ KR+ ++ KLK IV+ W K+V +Q  LPK +I A SATILT+GSYGL
Sbjct: 1   MVNEGLFPSPEEDEKRKIIVEKLKTIVVAWAKKVAWQRCLPKQQIAATSATILTYGSYGL 60

Query: 134 GVHNSGSDIDALCVGPYFATMADDFFVVLRNMLASRPEVTEIHC 3
           G H+  SDIDALCVGP+FAT+A+DFF+VL N+L SRPE++EIHC
Sbjct: 61  GFHDPESDIDALCVGPFFATIAEDFFIVLHNILKSRPEISEIHC 104


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