BLASTX nr result

ID: Cephaelis21_contig00020711 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00020711
         (1067 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30093.3| unnamed protein product [Vitis vinifera]              291   1e-76
ref|XP_003632734.1| PREDICTED: DNA-directed RNA polymerases I, I...   291   1e-76
ref|XP_002529165.1| DNA-directed RNA polymerase II, putative [Ri...   289   7e-76
ref|XP_004136650.1| PREDICTED: DNA-directed RNA polymerases I, I...   288   1e-75
ref|NP_001236527.1| uncharacterized protein LOC100306033 [Glycin...   288   2e-75

>emb|CBI30093.3| unnamed protein product [Vitis vinifera]
          Length = 330

 Score =  291 bits (746), Expect = 1e-76
 Identities = 140/210 (66%), Positives = 175/210 (83%)
 Frame = -1

Query: 896 CLSGFIDTGSAESHRYYLSRRTVLEMLRDRGYLVPSSEFEQSLQGFRDNYGQDPDVDRLR 717
           CLS F+D G  ESHRYYL+RRT+LEMLRDRGY +P+ + + SLQ FR  Y Q PD DRLR
Sbjct: 121 CLSSFVDEGRIESHRYYLARRTLLEMLRDRGYSIPALDIDISLQDFRSFYSQKPDPDRLR 180

Query: 716 ISADHKDDRNDKILVLFCGPNMVKVNTIRAIGCQIMNKGTLSRLILIVQKRVTSQAMKAV 537
           ISA  + D + KILV+FCGP++VKVN IR+I  QI+NK +LS+LIL++Q  +TSQA+KAV
Sbjct: 181 ISAALRSDPSKKILVIFCGPDVVKVNAIRSIATQIVNKDSLSKLILVLQNHITSQALKAV 240

Query: 536 ELFSFKVEIFQITDLLVNVTKHALKPKQQILTAEEKKRLLEKYSIEEKQLPRMLQKDAIA 357
           +LFSF+VE FQITDLLVN+TKH LKPK ++LT +EK +LL+KYS+ EKQLPRMLQ+DAIA
Sbjct: 241 DLFSFQVEKFQITDLLVNITKHVLKPKHRVLTDQEKNKLLKKYSLNEKQLPRMLQQDAIA 300

Query: 356 QYYGLEKGQVVKIMYSSEATETRVTYRCVW 267
           +YYGLEKGQVVK++Y+ E T + VTYRCVW
Sbjct: 301 RYYGLEKGQVVKVIYNGEITGSHVTYRCVW 330


>ref|XP_003632734.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Vitis vinifera]
          Length = 229

 Score =  291 bits (746), Expect = 1e-76
 Identities = 140/210 (66%), Positives = 175/210 (83%)
 Frame = -1

Query: 896 CLSGFIDTGSAESHRYYLSRRTVLEMLRDRGYLVPSSEFEQSLQGFRDNYGQDPDVDRLR 717
           CLS F+D G  ESHRYYL+RRT+LEMLRDRGY +P+ + + SLQ FR  Y Q PD DRLR
Sbjct: 20  CLSSFVDEGRIESHRYYLARRTLLEMLRDRGYSIPALDIDISLQDFRSFYSQKPDPDRLR 79

Query: 716 ISADHKDDRNDKILVLFCGPNMVKVNTIRAIGCQIMNKGTLSRLILIVQKRVTSQAMKAV 537
           ISA  + D + KILV+FCGP++VKVN IR+I  QI+NK +LS+LIL++Q  +TSQA+KAV
Sbjct: 80  ISAALRSDPSKKILVIFCGPDVVKVNAIRSIATQIVNKDSLSKLILVLQNHITSQALKAV 139

Query: 536 ELFSFKVEIFQITDLLVNVTKHALKPKQQILTAEEKKRLLEKYSIEEKQLPRMLQKDAIA 357
           +LFSF+VE FQITDLLVN+TKH LKPK ++LT +EK +LL+KYS+ EKQLPRMLQ+DAIA
Sbjct: 140 DLFSFQVEKFQITDLLVNITKHVLKPKHRVLTDQEKNKLLKKYSLNEKQLPRMLQQDAIA 199

Query: 356 QYYGLEKGQVVKIMYSSEATETRVTYRCVW 267
           +YYGLEKGQVVK++Y+ E T + VTYRCVW
Sbjct: 200 RYYGLEKGQVVKVIYNGEITGSHVTYRCVW 229


>ref|XP_002529165.1| DNA-directed RNA polymerase II, putative [Ricinus communis]
           gi|223531389|gb|EEF33224.1| DNA-directed RNA polymerase
           II, putative [Ricinus communis]
          Length = 238

 Score =  289 bits (740), Expect = 7e-76
 Identities = 141/218 (64%), Positives = 176/218 (80%)
 Frame = -1

Query: 920 FDGSSYPSCLSGFIDTGSAESHRYYLSRRTVLEMLRDRGYLVPSSEFEQSLQGFRDNYGQ 741
           F+      C S + D G+ E+HRYYLSRRTVLEMLRDRGY VPSSE + SLQ FR  +G 
Sbjct: 21  FNMEGLGKCFSSYADDGTHETHRYYLSRRTVLEMLRDRGYSVPSSEIDLSLQEFRAIHGP 80

Query: 740 DPDVDRLRISADHKDDRNDKILVLFCGPNMVKVNTIRAIGCQIMNKGTLSRLILIVQKRV 561
           +PD+DRL+ SA H  D + ++LVLF GP ++KV+TIRAI  QI+NK +L+ LIL++Q ++
Sbjct: 81  NPDIDRLKFSATHTSDPSKRMLVLFGGPGIIKVSTIRAIAGQIVNKDSLTGLILVLQNQI 140

Query: 560 TSQAMKAVELFSFKVEIFQITDLLVNVTKHALKPKQQILTAEEKKRLLEKYSIEEKQLPR 381
           T+QAMKAV+LF FKVE+FQITDLLVN+TKH LKPK Q+LT  EK++LL+ Y IEEKQLPR
Sbjct: 141 TNQAMKAVDLFKFKVEMFQITDLLVNITKHVLKPKHQVLTDREKQKLLKDYCIEEKQLPR 200

Query: 380 MLQKDAIAQYYGLEKGQVVKIMYSSEATETRVTYRCVW 267
           +L+KDAIA+YYGLEKGQVVK+ YS E TE+ VTYRCVW
Sbjct: 201 LLRKDAIARYYGLEKGQVVKVTYSGEITESHVTYRCVW 238


>ref|XP_004136650.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Cucumis sativus]
           gi|449524637|ref|XP_004169328.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit RPABC1-like
           [Cucumis sativus]
          Length = 227

 Score =  288 bits (738), Expect = 1e-75
 Identities = 140/213 (65%), Positives = 172/213 (80%)
 Frame = -1

Query: 905 YPSCLSGFIDTGSAESHRYYLSRRTVLEMLRDRGYLVPSSEFEQSLQGFRDNYGQDPDVD 726
           + +CLS +ID G+ ESHRY+LSRRTV+EML+DRGY + S   + SLQ FR+ +GQ PDVD
Sbjct: 15  FGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFSLQQFRETFGQFPDVD 74

Query: 725 RLRISADHKDDRNDKILVLFCGPNMVKVNTIRAIGCQIMNKGTLSRLILIVQKRVTSQAM 546
           RL++SA H  D + ++LV+FCG   VKVN IR I  QI NK +L  LILIVQ ++T+QAM
Sbjct: 75  RLKLSAAHHSDPSKRVLVVFCGTGAVKVNAIRNIAGQIANKDSLHGLILIVQNQITNQAM 134

Query: 545 KAVELFSFKVEIFQITDLLVNVTKHALKPKQQILTAEEKKRLLEKYSIEEKQLPRMLQKD 366
           KAVELFSFKVEIFQITDLLVN+TKHALKP  Q+LT EEK++LL++YSIEEKQLPRML+ D
Sbjct: 135 KAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTD 194

Query: 365 AIAQYYGLEKGQVVKIMYSSEATETRVTYRCVW 267
           AIA+YYGLEKGQVVK+ Y  + T   +TYRCVW
Sbjct: 195 AIARYYGLEKGQVVKVTYDGDMTRAHITYRCVW 227


>ref|NP_001236527.1| uncharacterized protein LOC100306033 [Glycine max]
           gi|255627335|gb|ACU14012.1| unknown [Glycine max]
          Length = 237

 Score =  288 bits (737), Expect = 2e-75
 Identities = 141/210 (67%), Positives = 168/210 (80%)
 Frame = -1

Query: 896 CLSGFIDTGSAESHRYYLSRRTVLEMLRDRGYLVPSSEFEQSLQGFRDNYGQDPDVDRLR 717
           CLS F+D GS ESHRYYLSRRT LEML+DRGY +PS E + SL  FRD +GQ PD DRLR
Sbjct: 28  CLSKFVDNGSVESHRYYLSRRTTLEMLKDRGYSIPSHEIDLSLSDFRDIHGQFPDPDRLR 87

Query: 716 ISADHKDDRNDKILVLFCGPNMVKVNTIRAIGCQIMNKGTLSRLILIVQKRVTSQAMKAV 537
           +S  H  + + +ILV+FCGP +VKV  IR    QI+N+ TL+ LILIV+  +TSQA+KAV
Sbjct: 88  LSLTHATNSSKRILVIFCGPGVVKVTAIRNTAGQIINRDTLTGLILIVENHITSQALKAV 147

Query: 536 ELFSFKVEIFQITDLLVNVTKHALKPKQQILTAEEKKRLLEKYSIEEKQLPRMLQKDAIA 357
            LFSFKVEIFQITDLLVN+TKH LKPK Q+LT ++K  LL+KY+IEEKQLPRMLQ DAIA
Sbjct: 148 NLFSFKVEIFQITDLLVNITKHVLKPKHQVLTDKQKINLLKKYNIEEKQLPRMLQTDAIA 207

Query: 356 QYYGLEKGQVVKIMYSSEATETRVTYRCVW 267
           +YYGLE+GQVVK+ YS E T+  VTYRCVW
Sbjct: 208 RYYGLERGQVVKVTYSGEVTQMHVTYRCVW 237


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