BLASTX nr result

ID: Cephaelis21_contig00020706 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00020706
         (1135 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267057.2| PREDICTED: pentatricopeptide repeat-containi...   389   e-106
emb|CBI36299.3| unnamed protein product [Vitis vinifera]              382   e-104
ref|XP_004152207.1| PREDICTED: pentatricopeptide repeat-containi...   376   e-102
ref|XP_002517613.1| pentatricopeptide repeat-containing protein,...   362   1e-97
ref|XP_002303255.1| predicted protein [Populus trichocarpa] gi|2...   354   2e-95

>ref|XP_002267057.2| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
            mitochondrial-like [Vitis vinifera]
          Length = 405

 Score =  389 bits (999), Expect = e-106
 Identities = 206/324 (63%), Positives = 250/324 (77%), Gaps = 3/324 (0%)
 Frame = +2

Query: 170  MLSLRLFRRLGTATHVAATAIASSDTVNPVSEKFVP--TNVVRKPLE-LDEPALIQLKKE 340
            MLSLR  RR   A   A TAIA      PV+E      +N ++KP + L+EPAL++LK E
Sbjct: 1    MLSLRPIRRFCHAA--AITAIA------PVAETVTSAKSNCIKKPDKPLEEPALVKLKAE 52

Query: 341  RDPEKLFNLFKANAHNKLVVENRFAFEDTVSRLAGAGRFDYIENLLEHQKTLPQGRREGF 520
            RDPE+LF LFKANAHN+LVVENRFAFEDTVSRLAGAGRFDYIE+LLEHQKTLPQGRREGF
Sbjct: 53   RDPERLFQLFKANAHNRLVVENRFAFEDTVSRLAGAGRFDYIEHLLEHQKTLPQGRREGF 112

Query: 521  IIRIIMLYGKVGMIKQAVNTFFDMELYGCRRTVKSFNAALKVLGASHDLEAIETFFWKAL 700
            I+RIIMLYGK GMIKQAV+TF+DM L+GC+RTVKSFNAALKVL  S+DLEAI+ F     
Sbjct: 113  IVRIIMLYGKAGMIKQAVDTFYDMHLFGCQRTVKSFNAALKVLTQSYDLEAIDLFLRDVP 172

Query: 701  VECGIKLDVYSVNIIINAVCKIGILDKAHLIMLEAEKLGIRPDVVTYTTLISAFYKINQS 880
             + GI+LDV+SVNI+I A+C + IL+KA+++M+E EK G+ PDVVTYTTLISAFYK N+ 
Sbjct: 173  FKFGIELDVFSVNIVIKALCDMDILEKAYMVMIEMEKAGVNPDVVTYTTLISAFYKSNRW 232

Query: 881  YIXXXXXXXXXXXXXXPNIATCNARIQFLVSRGRAWDANKLVSQMRCLGIPPDEVTYNLL 1060
             +              PN+AT N RIQ+LV+R RAW AN L+  M  LGI PDEVTYNL+
Sbjct: 233  EVGNGLWNLMVMKGCLPNLATFNVRIQYLVNRRRAWQANSLMGMMEYLGITPDEVTYNLV 292

Query: 1061 IKGFCRAGFIDMAKCVFSHLNDRG 1132
            IKGFC+AG+++MAK V+S L+ +G
Sbjct: 293  IKGFCQAGYLEMAKKVYSALHGKG 316


>emb|CBI36299.3| unnamed protein product [Vitis vinifera]
          Length = 353

 Score =  382 bits (981), Expect = e-104
 Identities = 202/314 (64%), Positives = 243/314 (77%), Gaps = 3/314 (0%)
 Frame = +2

Query: 170  MLSLRLFRRLGTATHVAATAIASSDTVNPVSEKFVP--TNVVRKPLE-LDEPALIQLKKE 340
            MLSLR  RR   A   A TAIA      PV+E      +N ++KP + L+EPAL++LK E
Sbjct: 1    MLSLRPIRRFCHAA--AITAIA------PVAETVTSAKSNCIKKPDKPLEEPALVKLKAE 52

Query: 341  RDPEKLFNLFKANAHNKLVVENRFAFEDTVSRLAGAGRFDYIENLLEHQKTLPQGRREGF 520
            RDPE+LF LFKANAHN+LVVENRFAFEDTVSRLAGAGRFDYIE+LLEHQKTLPQGRREGF
Sbjct: 53   RDPERLFQLFKANAHNRLVVENRFAFEDTVSRLAGAGRFDYIEHLLEHQKTLPQGRREGF 112

Query: 521  IIRIIMLYGKVGMIKQAVNTFFDMELYGCRRTVKSFNAALKVLGASHDLEAIETFFWKAL 700
            I+RIIMLYGK GMIKQAV+TF+DM L+GC+RTVKSFNAALKVL  S+DLEAI+ F     
Sbjct: 113  IVRIIMLYGKAGMIKQAVDTFYDMHLFGCQRTVKSFNAALKVLTQSYDLEAIDLFLRDVP 172

Query: 701  VECGIKLDVYSVNIIINAVCKIGILDKAHLIMLEAEKLGIRPDVVTYTTLISAFYKINQS 880
             + GI+LDV+SVNI+I A+C + IL+KA+++M+E EK G+ PDVVTYTTLISAFYK N+ 
Sbjct: 173  FKFGIELDVFSVNIVIKALCDMDILEKAYMVMIEMEKAGVNPDVVTYTTLISAFYKSNRW 232

Query: 881  YIXXXXXXXXXXXXXXPNIATCNARIQFLVSRGRAWDANKLVSQMRCLGIPPDEVTYNLL 1060
             +              PN+AT N RIQ+LV+R RAW AN L+  M  LGI PDEVTYNL+
Sbjct: 233  EVGNGLWNLMVMKGCLPNLATFNVRIQYLVNRRRAWQANSLMGMMEYLGITPDEVTYNLV 292

Query: 1061 IKGFCRAGFIDMAK 1102
            IKGFC+AG+++MAK
Sbjct: 293  IKGFCQAGYLEMAK 306


>ref|XP_004152207.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
            mitochondrial-like [Cucumis sativus]
            gi|449484169|ref|XP_004156805.1| PREDICTED:
            pentatricopeptide repeat-containing protein At1g80150,
            mitochondrial-like [Cucumis sativus]
          Length = 399

 Score =  376 bits (966), Expect = e-102
 Identities = 204/321 (63%), Positives = 237/321 (73%)
 Frame = +2

Query: 170  MLSLRLFRRLGTATHVAATAIASSDTVNPVSEKFVPTNVVRKPLELDEPALIQLKKERDP 349
            MLSLR  RR     H AAT I S+DT   V       N V+    L+EPAL++LK ERDP
Sbjct: 1    MLSLRPIRRF---CH-AATVIPSTDTTAAV------LNHVQNSKSLEEPALVKLKAERDP 50

Query: 350  EKLFNLFKANAHNKLVVENRFAFEDTVSRLAGAGRFDYIENLLEHQKTLPQGRREGFIIR 529
            EKLF+LFKANAHN+LV+ENRFAFEDTVSRLAGA RFDYIE+LLEHQKTLPQGRREGFIIR
Sbjct: 51   EKLFHLFKANAHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIR 110

Query: 530  IIMLYGKVGMIKQAVNTFFDMELYGCRRTVKSFNAALKVLGASHDLEAIETFFWKALVEC 709
            IIMLYGK  MIK A++TF+DM LYGC RTVKSFNA LKVL  S DL A+E F  +A  + 
Sbjct: 111  IIMLYGKAEMIKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKF 170

Query: 710  GIKLDVYSVNIIINAVCKIGILDKAHLIMLEAEKLGIRPDVVTYTTLISAFYKINQSYIX 889
             I+LD+ SVNI++ A C  G L++A+L+MLE EKLGI+PDVVTYTTLISA YK  QS I 
Sbjct: 171  DIELDIISVNILVKAFCDFGFLNRAYLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEIS 230

Query: 890  XXXXXXXXXXXXXPNIATCNARIQFLVSRGRAWDANKLVSQMRCLGIPPDEVTYNLLIKG 1069
                         PN+ T N RIQ L+ R RAWDANKL+  MR +GI PDEVTYNL+IKG
Sbjct: 231  NGLWNLMVLRGCLPNLTTFNVRIQHLIERRRAWDANKLMKMMRNIGIVPDEVTYNLVIKG 290

Query: 1070 FCRAGFIDMAKCVFSHLNDRG 1132
            FC+AG +DMAK V+S L+  G
Sbjct: 291  FCQAGLLDMAKRVYSALHGSG 311


>ref|XP_002517613.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223543245|gb|EEF44777.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 400

 Score =  362 bits (928), Expect = 1e-97
 Identities = 196/321 (61%), Positives = 243/321 (75%)
 Frame = +2

Query: 170  MLSLRLFRRLGTATHVAATAIASSDTVNPVSEKFVPTNVVRKPLELDEPALIQLKKERDP 349
            MLSLR  RR     + AA AI+S+D+   VS + +     +KPLE  EPAL +LK ERDP
Sbjct: 1    MLSLRPIRRF---CYSAAAAISSTDSPAAVSNRVLN----QKPLE--EPALAKLKAERDP 51

Query: 350  EKLFNLFKANAHNKLVVENRFAFEDTVSRLAGAGRFDYIENLLEHQKTLPQGRREGFIIR 529
            EKLFNLFKANA N+LV+ENRFAFEDT+SRLAGA RFDYIE+LLEHQKTLPQGRREGFIIR
Sbjct: 52   EKLFNLFKANARNRLVIENRFAFEDTISRLAGARRFDYIEHLLEHQKTLPQGRREGFIIR 111

Query: 530  IIMLYGKVGMIKQAVNTFFDMELYGCRRTVKSFNAALKVLGASHDLEAIETFFWKALVEC 709
            IIMLYGK GM K AV+TF DM +YGC+RTVKSFNAALKVL  + DLEAI+ F  +   + 
Sbjct: 112  IIMLYGKAGMTKHAVDTFNDMHMYGCKRTVKSFNAALKVLTETCDLEAIKAFLSEVPEKF 171

Query: 710  GIKLDVYSVNIIINAVCKIGILDKAHLIMLEAEKLGIRPDVVTYTTLISAFYKINQSYIX 889
             I LD++SVNIII A CK+ ILDKA+L+M++ E+LGIRPDVVTYTTLISAFYK ++  I 
Sbjct: 172  DIILDIFSVNIIIKAFCKMSILDKAYLVMIQMERLGIRPDVVTYTTLISAFYKNDRWEIS 231

Query: 890  XXXXXXXXXXXXXPNIATCNARIQFLVSRGRAWDANKLVSQMRCLGIPPDEVTYNLLIKG 1069
                         PN++T N RIQ LV+  ++W AN+++  M  +GI PDEVTYNL+IKG
Sbjct: 232  NGLWNLMVLKGCLPNLSTFNVRIQHLVNIRQSWQANEVMLLMERIGISPDEVTYNLVIKG 291

Query: 1070 FCRAGFIDMAKCVFSHLNDRG 1132
            F +AG+++MA+ V+S L+ +G
Sbjct: 292  FGQAGYLEMARRVYSALHGKG 312


>ref|XP_002303255.1| predicted protein [Populus trichocarpa] gi|222840687|gb|EEE78234.1|
            predicted protein [Populus trichocarpa]
          Length = 401

 Score =  354 bits (909), Expect = 2e-95
 Identities = 192/321 (59%), Positives = 237/321 (73%)
 Frame = +2

Query: 170  MLSLRLFRRLGTATHVAATAIASSDTVNPVSEKFVPTNVVRKPLELDEPALIQLKKERDP 349
            MLSLR  RR        A ++A S +   VS +    N  +KPLE  EPAL++LK ERDP
Sbjct: 1    MLSLRNTRRFCNF----AASVALSRSPAAVSNRIQNQN--QKPLE--EPALVKLKAERDP 52

Query: 350  EKLFNLFKANAHNKLVVENRFAFEDTVSRLAGAGRFDYIENLLEHQKTLPQGRREGFIIR 529
            EKLFNLFKANA N+LVVENRFAFEDTVSRLAGA RFDYIE+LLEHQK LPQGRREGF++R
Sbjct: 53   EKLFNLFKANAENRLVVENRFAFEDTVSRLAGANRFDYIEHLLEHQKPLPQGRREGFMVR 112

Query: 530  IIMLYGKVGMIKQAVNTFFDMELYGCRRTVKSFNAALKVLGASHDLEAIETFFWKALVEC 709
            IIMLYGK GMIK A++TF++M L+GC+RTVKS NAALKVL  + DL AIE F  +A  + 
Sbjct: 113  IIMLYGKAGMIKHAIDTFYNMHLHGCKRTVKSVNAALKVLTGTRDLAAIEAFVNEAPKKF 172

Query: 710  GIKLDVYSVNIIINAVCKIGILDKAHLIMLEAEKLGIRPDVVTYTTLISAFYKINQSYIX 889
             I+LD++SVNII+ A+C+ G LDKA+L+M+E EK G+RPDV+TYTTL+SAFYK N+S I 
Sbjct: 173  DIELDIFSVNIIVKALCETGNLDKAYLLMVEMEKSGVRPDVITYTTLMSAFYKNNRSEIG 232

Query: 890  XXXXXXXXXXXXXPNIATCNARIQFLVSRGRAWDANKLVSQMRCLGIPPDEVTYNLLIKG 1069
                         PN+AT N RIQ+LV+  RAW AN ++  M  +GI PDEVTYNL+IKG
Sbjct: 233  NGLWNLMVLKGCLPNLATFNVRIQYLVNIRRAWHANDVMRLMLKIGIVPDEVTYNLVIKG 292

Query: 1070 FCRAGFIDMAKCVFSHLNDRG 1132
            F + G ++MAK V+  L  +G
Sbjct: 293  FFQTGKLEMAKMVYFSLRGKG 313


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