BLASTX nr result

ID: Cephaelis21_contig00020686 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00020686
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34155.3| unnamed protein product [Vitis vinifera]              247   8e-64
ref|XP_002279923.1| PREDICTED: uncharacterized protein LOC100267...   247   8e-64
ref|XP_004171233.1| PREDICTED: mediator of RNA polymerase II tra...   239   2e-61
ref|XP_004139381.1| PREDICTED: mediator of RNA polymerase II tra...   239   2e-61
ref|XP_002328340.1| predicted protein [Populus trichocarpa] gi|2...   237   8e-61

>emb|CBI34155.3| unnamed protein product [Vitis vinifera]
          Length = 1724

 Score =  247 bits (630), Expect = 8e-64
 Identities = 129/156 (82%), Positives = 136/156 (87%), Gaps = 3/156 (1%)
 Frame = +2

Query: 2    ALRFFVGGYVFAVSVHRVQLLLQVISVTRFHHSQRQQQ--NSATGQDELTQSEISEICDY 175
            ALRFFVGGYVFAVSVHRVQLLLQV+SV RFHH Q+ QQ  NSAT Q+ELTQSEI EICDY
Sbjct: 1451 ALRFFVGGYVFAVSVHRVQLLLQVLSVKRFHHQQQPQQQPNSATAQEELTQSEIGEICDY 1510

Query: 176  FSRRVASEPYDASRVASFITLLTLPISVLREFLKLIAWKKNLAQSQGVDLAP-QKSRIEL 352
            FSRRVASEPYDASRVASFITLLTLPISVLREFLKLIAWKK LAQ+QG D AP QK RIEL
Sbjct: 1511 FSRRVASEPYDASRVASFITLLTLPISVLREFLKLIAWKKGLAQAQGGDTAPAQKPRIEL 1570

Query: 353  CLENHGGFNMDGKPESSSLSKSNIYYDRHHNAVDFG 460
            CLENH G  MD   E+SS SKSNI+YDR HN+VDFG
Sbjct: 1571 CLENHAGLKMDESSENSSTSKSNIHYDRSHNSVDFG 1606


>ref|XP_002279923.1| PREDICTED: uncharacterized protein LOC100267561 [Vitis vinifera]
          Length = 1758

 Score =  247 bits (630), Expect = 8e-64
 Identities = 129/156 (82%), Positives = 136/156 (87%), Gaps = 3/156 (1%)
 Frame = +2

Query: 2    ALRFFVGGYVFAVSVHRVQLLLQVISVTRFHHSQRQQQ--NSATGQDELTQSEISEICDY 175
            ALRFFVGGYVFAVSVHRVQLLLQV+SV RFHH Q+ QQ  NSAT Q+ELTQSEI EICDY
Sbjct: 1485 ALRFFVGGYVFAVSVHRVQLLLQVLSVKRFHHQQQPQQQPNSATAQEELTQSEIGEICDY 1544

Query: 176  FSRRVASEPYDASRVASFITLLTLPISVLREFLKLIAWKKNLAQSQGVDLAP-QKSRIEL 352
            FSRRVASEPYDASRVASFITLLTLPISVLREFLKLIAWKK LAQ+QG D AP QK RIEL
Sbjct: 1545 FSRRVASEPYDASRVASFITLLTLPISVLREFLKLIAWKKGLAQAQGGDTAPAQKPRIEL 1604

Query: 353  CLENHGGFNMDGKPESSSLSKSNIYYDRHHNAVDFG 460
            CLENH G  MD   E+SS SKSNI+YDR HN+VDFG
Sbjct: 1605 CLENHAGLKMDESSENSSTSKSNIHYDRSHNSVDFG 1640


>ref|XP_004171233.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            14-like, partial [Cucumis sativus]
          Length = 1332

 Score =  239 bits (610), Expect = 2e-61
 Identities = 126/155 (81%), Positives = 136/155 (87%), Gaps = 3/155 (1%)
 Frame = +2

Query: 2    ALRFFVGGYVFAVSVHRVQLLLQVISVTRFHHSQRQQQ--NSATGQDELTQSEISEICDY 175
            ALRFFVGGYVFAVSVHRVQLLLQV+SV RFHH Q+QQQ  NSAT Q+ELTQSEI EICDY
Sbjct: 1059 ALRFFVGGYVFAVSVHRVQLLLQVLSVKRFHHQQQQQQQQNSATAQEELTQSEIGEICDY 1118

Query: 176  FSRRVASEPYDASRVASFITLLTLPISVLREFLKLIAWKKNLAQSQGVDLAP-QKSRIEL 352
            FSRRVASEPYDASRVASFITLLTLPISVLREFLKLIAWKK +AQ+QG D+AP QK RIEL
Sbjct: 1119 FSRRVASEPYDASRVASFITLLTLPISVLREFLKLIAWKKGVAQAQGGDIAPAQKPRIEL 1178

Query: 353  CLENHGGFNMDGKPESSSLSKSNIYYDRHHNAVDF 457
            CLENH G + D   E S+ SKSNI+YDR HN+VDF
Sbjct: 1179 CLENHSGLSTDENSERST-SKSNIHYDRQHNSVDF 1212


>ref|XP_004139381.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            14-like [Cucumis sativus]
          Length = 1800

 Score =  239 bits (610), Expect = 2e-61
 Identities = 126/155 (81%), Positives = 136/155 (87%), Gaps = 3/155 (1%)
 Frame = +2

Query: 2    ALRFFVGGYVFAVSVHRVQLLLQVISVTRFHHSQRQQQ--NSATGQDELTQSEISEICDY 175
            ALRFFVGGYVFAVSVHRVQLLLQV+SV RFHH Q+QQQ  NSAT Q+ELTQSEI EICDY
Sbjct: 1527 ALRFFVGGYVFAVSVHRVQLLLQVLSVKRFHHQQQQQQQPNSATAQEELTQSEIGEICDY 1586

Query: 176  FSRRVASEPYDASRVASFITLLTLPISVLREFLKLIAWKKNLAQSQGVDLAP-QKSRIEL 352
            FSRRVASEPYDASRVASFITLLTLPISVLREFLKLIAWKK +AQ+QG D+AP QK RIEL
Sbjct: 1587 FSRRVASEPYDASRVASFITLLTLPISVLREFLKLIAWKKGVAQAQGGDIAPAQKPRIEL 1646

Query: 353  CLENHGGFNMDGKPESSSLSKSNIYYDRHHNAVDF 457
            CLENH G + D   E S+ SKSNI+YDR HN+VDF
Sbjct: 1647 CLENHSGLSTDENSERST-SKSNIHYDRQHNSVDF 1680


>ref|XP_002328340.1| predicted protein [Populus trichocarpa] gi|222838055|gb|EEE76420.1|
            predicted protein [Populus trichocarpa]
          Length = 1685

 Score =  237 bits (604), Expect = 8e-61
 Identities = 123/155 (79%), Positives = 134/155 (86%), Gaps = 3/155 (1%)
 Frame = +2

Query: 2    ALRFFVGGYVFAVSVHRVQLLLQVISVTRFHHSQRQQQ--NSATGQDELTQSEISEICDY 175
            ALRFFVGGYVFAVSVHRVQLLLQVISV RFHH Q+QQQ  N+   Q+ELTQSEI EICDY
Sbjct: 1413 ALRFFVGGYVFAVSVHRVQLLLQVISVKRFHHQQQQQQQQNNTAAQEELTQSEIGEICDY 1472

Query: 176  FSRRVASEPYDASRVASFITLLTLPISVLREFLKLIAWKKNLAQSQGVDLAP-QKSRIEL 352
            FSRRVASEPYDASRVASFITLLTLPISVLREFLKLIAWKK L  +QG ++AP QK RIEL
Sbjct: 1473 FSRRVASEPYDASRVASFITLLTLPISVLREFLKLIAWKKGLVLAQGGEIAPGQKPRIEL 1532

Query: 353  CLENHGGFNMDGKPESSSLSKSNIYYDRHHNAVDF 457
            CLENH G N+D   E+SS +KSNI+YDR HN+VDF
Sbjct: 1533 CLENHTGLNVDENSENSSAAKSNIHYDRPHNSVDF 1567


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