BLASTX nr result

ID: Cephaelis21_contig00020665 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00020665
         (738 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE79383.1| unnamed protein product [Ipomoea batatas]             129   6e-28
dbj|BAE79381.1| unnamed protein product [Ipomoea batatas]             129   6e-28
emb|CCA66008.1| hypothetical protein [Beta vulgaris subsp. vulga...   127   3e-27
ref|NP_178215.1| zinc ion binding / nucleic acid binding [Arabid...   127   3e-27
gb|AAD37019.2| putative non-LTR retrolelement reverse transcript...   126   5e-27

>dbj|BAE79383.1| unnamed protein product [Ipomoea batatas]
          Length = 532

 Score =  129 bits (324), Expect = 6e-28
 Identities = 71/215 (33%), Positives = 115/215 (53%), Gaps = 8/215 (3%)
 Frame = +3

Query: 3   EDYL*FILGGPWTLLGHYLIVQPWHINFSPEDDNFTSVVSWIRIPGLAIHRYHKRVLQKI 182
           +DYL  +L GPW +  +YLI Q W  NF P    F  +  W+R+P L++  +    ++ I
Sbjct: 150 KDYLHVLLDGPWKIFDNYLITQRWVPNFEPRTAKFQKMAVWVRLPELSMEYFRDDTIKAI 209

Query: 183 SSFIGKLEKIDYNTLSAERGRFARIAVELDLTKPLVSKFLLNGVLHRIEYENLPRICFSC 362
              IGK  ++D  T++ E+GRFAR AVE+DL KPLVS+  + G + ++EYE L  +CF C
Sbjct: 210 LENIGKPLRLDRTTMAREKGRFARAAVEIDLGKPLVSEIWVMGDVQKVEYEGLHVVCFGC 269

Query: 363 GMYGHVAESCSLLNNS---TDVTGS-----SEVRDFSSSIKPSEMRGQEVKDNAFGPWMM 518
           G+ GH  ++C L   +   T  TGS     ++  +   +  P++   Q  +   +GPWM+
Sbjct: 270 GVVGHREQACPLARPTAPETMATGSNTETAADTAEPQPAEGPADAVTQPAERRRYGPWMI 329

Query: 519 APKRGRNFCRVQQKNNVSNGERSAAGSRFNILANN 623
             ++        Q+   +N  R  A ++ N  + N
Sbjct: 330 VTRK--------QQATTNNPPRQQATNKPNQNSRN 356


>dbj|BAE79381.1| unnamed protein product [Ipomoea batatas]
          Length = 532

 Score =  129 bits (324), Expect = 6e-28
 Identities = 65/184 (35%), Positives = 104/184 (56%), Gaps = 8/184 (4%)
 Frame = +3

Query: 3   EDYL*FILGGPWTLLGHYLIVQPWHINFSPEDDNFTSVVSWIRIPGLAIHRYHKRVLQKI 182
           +DYL  +L GPW +  +YLI Q W  NF P    F  +  W+R+P L++  +    ++ I
Sbjct: 150 KDYLHVLLDGPWKIFDNYLITQRWVPNFKPRTAKFQKMAVWVRLPELSMEYFRDDTIKAI 209

Query: 183 SSFIGKLEKIDYNTLSAERGRFARIAVELDLTKPLVSKFLLNGVLHRIEYENLPRICFSC 362
              IGK  ++D  T++ E+GRFAR AVE+DL KPLVS+  + G + ++EYE L  +CF C
Sbjct: 210 LENIGKPLRLDRTTMAREKGRFARAAVEIDLDKPLVSEIWVMGDVQKVEYEGLHVVCFGC 269

Query: 363 GMYGHVAESCSLLNNS---TDVTGS-----SEVRDFSSSIKPSEMRGQEVKDNAFGPWMM 518
           G+ GH  ++C L   +   T  TGS     ++  +   +  P++   Q  +   +GPWM+
Sbjct: 270 GVVGHREQACPLARPTAPETMATGSNTETAADTAEPQPAEGPADAVTQPAERRRYGPWMI 329

Query: 519 APKR 530
             ++
Sbjct: 330 VTRK 333


>emb|CCA66008.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 678

 Score =  127 bits (318), Expect = 3e-27
 Identities = 65/184 (35%), Positives = 108/184 (58%), Gaps = 6/184 (3%)
 Frame = +3

Query: 3   EDYL*FILGGPWTLLGHYLIVQPWHINFSPEDDNFTSVVSWIRIPGLAIHRYHKRVLQKI 182
           EDY   +  GPW +   YL ++ W  NF  + +    + +W+RIP L++  + K+ L  I
Sbjct: 186 EDYDFVLTQGPWLIGDSYLTIRKWVPNFVSDQEPIKKLTAWVRIPHLSVEYFDKQFLHSI 245

Query: 183 SSFIGKLEKIDYNTLSAERGRFARIAVELDLTKPLVSKFLLNGVLHRIEYENLPRICFSC 362
            S IGK+ KID NT S +RG++ R  +E+DL+KPL+SKF LNG +  ++YE L  ICF C
Sbjct: 246 GSKIGKVIKIDRNTESMDRGQYVRFCIEVDLSKPLLSKFRLNGKVWIVQYEGLRLICFKC 305

Query: 363 GMYGHVAESCSLL------NNSTDVTGSSEVRDFSSSIKPSEMRGQEVKDNAFGPWMMAP 524
           G  GH  ++C++       N  +++  ++   D+   ++ + +  QEV++  +G WMM  
Sbjct: 306 GHLGHKEDTCNVFKAQQKDNTESNINTAANGADY-QQVEENHV-PQEVREK-YGNWMMVT 362

Query: 525 KRGR 536
           + G+
Sbjct: 363 RPGK 366


>ref|NP_178215.1| zinc ion binding / nucleic acid binding [Arabidopsis thaliana]
           gi|6598620|gb|AAF18653.1| hypothetical protein
           [Arabidopsis thaliana] gi|330250297|gb|AEC05391.1| zinc
           ion binding / nucleic acid binding protein [Arabidopsis
           thaliana]
          Length = 515

 Score =  127 bits (318), Expect = 3e-27
 Identities = 53/130 (40%), Positives = 86/130 (66%)
 Frame = +3

Query: 3   EDYL*FILGGPWTLLGHYLIVQPWHINFSPEDDNFTSVVSWIRIPGLAIHRYHKRVLQKI 182
           E+Y+  + GGPW +LG+YL+VQ W   F P  D+  +   W+R+  +  + YH+ +L +I
Sbjct: 127 EEYMAALTGGPWRVLGNYLLVQDWSSRFDPLRDDIVTTPVWVRLSNIPYNYYHRCLLMEI 186

Query: 183 SSFIGKLEKIDYNTLSAERGRFARIAVELDLTKPLVSKFLLNGVLHRIEYENLPRICFSC 362
           +  +G+  K+D NT++ ++GRFAR+ +E++L KPL    L+NG  + + YE L +IC SC
Sbjct: 187 ARGLGRPLKVDMNTINFDKGRFARVCIEVNLAKPLKGTVLINGDRYFVAYEGLSKICSSC 246

Query: 363 GMYGHVAESC 392
           G+YGH+  SC
Sbjct: 247 GIYGHLVHSC 256


>gb|AAD37019.2| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 855

 Score =  126 bits (316), Expect = 5e-27
 Identities = 58/144 (40%), Positives = 81/144 (56%)
 Frame = +3

Query: 3   EDYL*FILGGPWTLLGHYLIVQPWHINFSPEDDNFTSVVSWIRIPGLAIHRYHKRVLQKI 182
           ++YL  + GGPW   G YL+VQ W   F P  D  T+   W+R+  + +  YH  +L  I
Sbjct: 102 DEYLSALTGGPWRAFGSYLLVQAWSPEFDPLRDEITTTPIWVRLMNIPLSLYHTSILMGI 161

Query: 183 SSFIGKLEKIDYNTLSAERGRFARIAVELDLTKPLVSKFLLNGVLHRIEYENLPRICFSC 362
           +  +GK  K+D  TL  ER RFAR+ +E+DL KPL    LLNG  + + YE L  IC  C
Sbjct: 162 AGSLGKPVKVDMTTLHVERARFARMCIEVDLAKPLKGTLLLNGERYFVSYEGLANICSRC 221

Query: 363 GMYGHVAESCSLLNNSTDVTGSSE 434
           GMYGH+  +C       +V  +S+
Sbjct: 222 GMYGHLIHTCPQTIAEKEVNAASQ 245


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