BLASTX nr result

ID: Cephaelis21_contig00020628 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00020628
         (493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24224.3| unnamed protein product [Vitis vinifera]               92   4e-17
ref|XP_002275456.1| PREDICTED: integrator complex subunit 3 homo...    92   4e-17
ref|XP_002527040.1| conserved hypothetical protein [Ricinus comm...    82   3e-14
ref|XP_003610502.1| Integrator complex subunit-like protein [Med...    82   5e-14
ref|XP_002298478.1| predicted protein [Populus trichocarpa] gi|2...    79   5e-13

>emb|CBI24224.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 48/95 (50%), Positives = 65/95 (68%), Gaps = 3/95 (3%)
 Frame = -2

Query: 492 VHSIPKYIDVTQNLFEFLLILVENYDIERKVMVVSGVSSAFSLLVRKGAFQSLDALTSSD 313
           V+S+PKY+D+T  L EFLL+LV+NYDIERK ++V GV+SAF++LVR+G   S+  LTS D
Sbjct: 270 VNSVPKYVDMTHTLLEFLLLLVDNYDIERKDIIVRGVASAFNMLVRRGVVGSIHVLTSCD 329

Query: 312 MLSPILKQW---FTKMFMDVSAVPSKTVLVSVAST 217
            LSP LK+W   F K  +     P+     SV S+
Sbjct: 330 ALSPSLKEWLGRFLKAGVSKEVQPAHLPRPSVPSS 364


>ref|XP_002275456.1| PREDICTED: integrator complex subunit 3 homolog [Vitis vinifera]
          Length = 928

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 48/95 (50%), Positives = 65/95 (68%), Gaps = 3/95 (3%)
 Frame = -2

Query: 492 VHSIPKYIDVTQNLFEFLLILVENYDIERKVMVVSGVSSAFSLLVRKGAFQSLDALTSSD 313
           V+S+PKY+D+T  L EFLL+LV+NYDIERK ++V GV+SAF++LVR+G   S+  LTS D
Sbjct: 370 VNSVPKYVDMTHTLLEFLLLLVDNYDIERKDIIVRGVASAFNMLVRRGVVGSIHVLTSCD 429

Query: 312 MLSPILKQW---FTKMFMDVSAVPSKTVLVSVAST 217
            LSP LK+W   F K  +     P+     SV S+
Sbjct: 430 ALSPSLKEWLGRFLKAGVSKEVQPAHLPRPSVPSS 464


>ref|XP_002527040.1| conserved hypothetical protein [Ricinus communis]
           gi|223533602|gb|EEF35340.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 982

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 41/68 (60%), Positives = 52/68 (76%)
 Frame = -2

Query: 492 VHSIPKYIDVTQNLFEFLLILVENYDIERKVMVVSGVSSAFSLLVRKGAFQSLDALTSSD 313
           V SI KYID+T +L EFLL+LVENYD++R  ++  G+ SAF++LV+KG   SLD LTS D
Sbjct: 345 VCSITKYIDMTNSLLEFLLLLVENYDLDRPHVISRGILSAFNVLVQKGVIHSLDVLTSCD 404

Query: 312 MLSPILKQ 289
            LSP LKQ
Sbjct: 405 ALSPCLKQ 412


>ref|XP_003610502.1| Integrator complex subunit-like protein [Medicago truncatula]
           gi|355511557|gb|AES92699.1| Integrator complex
           subunit-like protein [Medicago truncatula]
          Length = 560

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 42/91 (46%), Positives = 57/91 (62%)
 Frame = -2

Query: 492 VHSIPKYIDVTQNLFEFLLILVENYDIERKVMVVSGVSSAFSLLVRKGAFQSLDALTSSD 313
           VHSI +Y+++T  L EFLL+LV+NYD+E K ++V GVS AF  L  KG  QSLD LTS  
Sbjct: 385 VHSITQYVEMTNTLLEFLLLLVDNYDMEHKDIIVKGVSLAFRFLESKGVIQSLDILTSCP 444

Query: 312 MLSPILKQWFTKMFMDVSAVPSKTVLVSVAS 220
            LSP LK+  +++        SK  L  + +
Sbjct: 445 TLSPSLKEGLSRLLSSGKPESSKEFLPGIVN 475


>ref|XP_002298478.1| predicted protein [Populus trichocarpa] gi|222845736|gb|EEE83283.1|
           predicted protein [Populus trichocarpa]
          Length = 995

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 37/75 (49%), Positives = 53/75 (70%)
 Frame = -2

Query: 492 VHSIPKYIDVTQNLFEFLLILVENYDIERKVMVVSGVSSAFSLLVRKGAFQSLDALTSSD 313
           V SIPKYID+T +L EFLL + ENY+ +R  ++  G+SSA  +LV+KG  +S+D LTS D
Sbjct: 385 VCSIPKYIDITHSLLEFLLFIAENYEEDRNYVIRRGLSSAMRMLVQKGVVRSMDILTSCD 444

Query: 312 MLSPILKQWFTKMFM 268
            LSP L++   K+ +
Sbjct: 445 ALSPFLREGLRKLIL 459


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